RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 A0A0U1RRA0 63 aa9.79□□□□□ -0.84
CBX3-201ENST00000337620 SPAG11BQ08648 103 aa9.79□□□□□ -0.84
CBX3-201ENST00000337620 TAL2Q16559 108 aa9.79□□□□□ -0.84
CBX3-201ENST00000337620 CEND1Q8N111 149 aa9.79□□□□□ -0.84
CBX3-201ENST00000337620 LINC00526Q96FQ7 95 aa9.79□□□□□ -0.84
CBX3-201ENST00000337620 SPANXB1Q9NS25 103 aaPredicted RBP9.79□□□□□ -0.84
CBX3-201ENST00000337620 CIRBPQ14011 172 aaKnown RBP9.78□□□□□ -0.84
CBX3-201ENST00000337620 ADAMTSL4-AS1Q5T5F5 129 aa9.77□□□□□ -0.84
CBX3-201ENST00000337620 C6orf223Q8N319 242 aa9.77□□□□□ -0.84
CBX3-201ENST00000337620 LITAFQ99732 161 aa9.77□□□□□ -0.84
CBX3-201ENST00000337620 PTTG1IPP53801 180 aa9.76□□□□□ -0.85
CBX3-201ENST00000337620 HIGD2BQ4VC39 106 aa9.76□□□□□ -0.85
CBX3-201ENST00000337620 SFTA2Q6UW10 78 aa9.76□□□□□ -0.85
CBX3-201ENST00000337620 NBDYA0A0U1RRE5 68 aa9.76□□□□□ -0.85
CBX3-201ENST00000337620 TIMM17BO60830 172 aa9.76□□□□□ -0.85
CBX3-201ENST00000337620 SMIM13P0DJ93 91 aa9.76□□□□□ -0.85
CBX3-201ENST00000337620 FXYD2P54710 66 aa9.76□□□□□ -0.85
CBX3-201ENST00000337620 CASC10Q5T4H9 136 aa9.76□□□□□ -0.85
CBX3-201ENST00000337620 DAND5Q8N907 189 aa9.76□□□□□ -0.85
CBX3-201ENST00000337620 TM2D2Q9BX73 214 aa9.76□□□□□ -0.85
CBX3-201ENST00000337620 ZNF561-AS1K7EIQ3 104 aa9.75□□□□□ -0.85
CBX3-201ENST00000337620 CXCL5P42830 114 aa9.75□□□□□ -0.85
CBX3-201ENST00000337620 C15orf56Q8N910 161 aa9.75□□□□□ -0.85
CBX3-201ENST00000337620 NPC2P61916 151 aa9.74□□□□□ -0.85
CBX3-201ENST00000337620 TTC32Q5I0X7 151 aa9.74□□□□□ -0.85
CBX3-201ENST00000337620 DNAH10Q8IVF4 4471 aa9.74□□□□□ -0.85
CBX3-201ENST00000337620 PFN2P35080 140 aa9.74□□□□□ -0.85
CBX3-201ENST00000337620 MUSTN1Q8IVN3 82 aa9.74□□□□□ -0.85
CBX3-201ENST00000337620 COX11Q9Y6N1 276 aa9.74□□□□□ -0.85
CBX3-201ENST00000337620 LINC00158P58513 81 aa9.73□□□□□ -0.85
CBX3-201ENST00000337620 UNQ6190/PRO20217Q6UXQ8 127 aa9.73□□□□□ -0.85
CBX3-201ENST00000337620 SPANXDQ9BXN6 97 aa9.73□□□□□ -0.85
CBX3-201ENST00000337620 SPANXCQ9NY87 97 aa9.73□□□□□ -0.85
CBX3-201ENST00000337620 M0R2N4 97 aa9.73□□□□□ -0.85
CBX3-201ENST00000337620 NTN5Q8WTR8 489 aaPredicted RBP9.73□□□□□ -0.85
CBX3-201ENST00000337620 ERG28Q9UKR5 140 aa9.73□□□□□ -0.85
CBX3-201ENST00000337620 COL5A1-AS1Q5SY13 56 aa9.72□□□□□ -0.85
CBX3-201ENST00000337620 C10orf25Q5T742 122 aa9.72□□□□□ -0.85
CBX3-201ENST00000337620 A6NDN8 102 aa9.71□□□□□ -0.85
CBX3-201ENST00000337620 C3orf84H3BNL1 204 aa9.71□□□□□ -0.85
CBX3-201ENST00000337620 PSCAO43653 123 aa9.71□□□□□ -0.85
CBX3-201ENST00000337620 Q6ZVH6 145 aa9.71□□□□□ -0.85
CBX3-201ENST00000337620 USP17L23D6RBM5 183 aa9.71□□□□□ -0.86
CBX3-201ENST00000337620 LY6G6CO95867 125 aa9.71□□□□□ -0.86
CBX3-201ENST00000337620 C9orf116Q5BN46 136 aaPredicted RBP9.71□□□□□ -0.86
CBX3-201ENST00000337620 CAMK2N2Q96S95 79 aa9.71□□□□□ -0.86
CBX3-201ENST00000337620 NHP2Q9NX24 153 aaKnown RBP9.71□□□□□ -0.86
CBX3-201ENST00000337620 LECT2O14960 151 aa9.7□□□□□ -0.86
CBX3-201ENST00000337620 MIR7-3HGQ8N6C7 128 aa9.7□□□□□ -0.86
CBX3-201ENST00000337620 GVQW2A0A096LPI5 108 aaPredicted RBP9.7□□□□□ -0.86
CBX3-201ENST00000337620 TMEM238LA0A1B0GVL6 79 aa9.69□□□□□ -0.86
CBX3-201ENST00000337620 A6NJY4 79 aa9.69□□□□□ -0.86
CBX3-201ENST00000337620 RPL24P83731 157 aaKnown RBP9.69□□□□□ -0.86
CBX3-201ENST00000337620 EIF4EBP3O60516 100 aaPredicted RBP9.68□□□□□ -0.86
CBX3-201ENST00000337620 IFITM1P13164 125 aa9.68□□□□□ -0.86
CBX3-201ENST00000337620 LINC00308Q8TCZ7 52 aa9.68□□□□□ -0.86
CBX3-201ENST00000337620 A4D1N5 150 aa9.68□□□□□ -0.86
CBX3-201ENST00000337620 C2orf48Q96LS8 159 aa9.68□□□□□ -0.86
CBX3-201ENST00000337620 KMT2AQ03164 3969 aa9.67□□□□□ -0.86
CBX3-201ENST00000337620 K7ERJ3 54 aa9.67□□□□□ -0.86
CBX3-201ENST00000337620 COX17Q14061 63 aa9.67□□□□□ -0.86
CBX3-201ENST00000337620 Q6ZRU5 148 aa9.67□□□□□ -0.86
CBX3-201ENST00000337620 C6orf48Q9UBA6 75 aa9.67□□□□□ -0.86
CBX3-201ENST00000337620 SOSTDC1Q6X4U4 206 aa9.66□□□□□ -0.86
CBX3-201ENST00000337620 COPS9Q8WXC6 57 aa9.66□□□□□ -0.86
CBX3-201ENST00000337620 LINC00476Q8WZB0 136 aa9.66□□□□□ -0.86
CBX3-201ENST00000337620 RAB37Q96AX2 223 aa9.66□□□□□ -0.86
CBX3-201ENST00000337620 SYCNQ0VAF6 134 aa9.65□□□□□ -0.86
CBX3-201ENST00000337620 TRBV30A0A0K0K1B3 111 aa9.64□□□□□ -0.87
CBX3-201ENST00000337620 CFC1BP0CG36 223 aa9.64□□□□□ -0.87
CBX3-201ENST00000337620 CFC1P0CG37 223 aa9.64□□□□□ -0.87
CBX3-201ENST00000337620 WFDC2Q14508 124 aa9.64□□□□□ -0.87
CBX3-201ENST00000337620 F8WDY8 70 aa9.64□□□□□ -0.87
CBX3-201ENST00000337620 TAX1BP3O14907 124 aa9.64□□□□□ -0.87
CBX3-201ENST00000337620 SVIPQ8NHG7 77 aa9.63□□□□□ -0.87
CBX3-201ENST00000337620 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.62□□□□□ -0.87
CBX3-201ENST00000337620 A0A1B0GWB2 263 aa9.62□□□□□ -0.87
CBX3-201ENST00000337620 SLPIP03973 132 aa9.62□□□□□ -0.87
CBX3-201ENST00000337620 Q6ZR54 194 aa9.62□□□□□ -0.87
CBX3-201ENST00000337620 ALMS1Q8TCU4 4167 aa9.62□□□□□ -0.87
CBX3-201ENST00000337620 Q6ZRN7 208 aaPredicted RBP9.62□□□□□ -0.87
CBX3-201ENST00000337620 DNAH2Q9P225 4427 aa9.61□□□□□ -0.87
CBX3-201ENST00000337620 CARD19Q96LW7 228 aa9.61□□□□□ -0.87
CBX3-201ENST00000337620 SND1-IT1Q9HBX3 110 aa9.61□□□□□ -0.87
CBX3-201ENST00000337620 NAA38Q9BRA0 125 aaKnown RBP9.59□□□□□ -0.87
CBX3-201ENST00000337620 A0A0B4J2C4 111 aa9.59□□□□□ -0.87
CBX3-201ENST00000337620 PPDPFQ9H3Y8 114 aa9.59□□□□□ -0.87
CBX3-201ENST00000337620 PRO1854Q9UHT4 67 aa9.59□□□□□ -0.87
CBX3-201ENST00000337620 DNAH6Q9C0G6 4158 aa9.58□□□□□ -0.88
CBX3-201ENST00000337620 C14orf177Q52M58 125 aa9.58□□□□□ -0.88
CBX3-201ENST00000337620 LRCOL1A6NCL2 159 aa9.58□□□□□ -0.88
CBX3-201ENST00000337620 NDUFC2-KCTD14E9PQ53 114 aa9.58□□□□□ -0.88
CBX3-201ENST00000337620 PGPEP1Q9NXJ5 209 aa9.58□□□□□ -0.88
CBX3-201ENST00000337620 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.57□□□□□ -0.88
CBX3-201ENST00000337620 C9orf118A6NHY6 69 aa9.57□□□□□ -0.88
CBX3-201ENST00000337620 H3BUT2 72 aa9.57□□□□□ -0.88
CBX3-201ENST00000337620 H7C2G1 150 aa9.57□□□□□ -0.88
CBX3-201ENST00000337620 C1orf134Q5TEV5 83 aa9.57□□□□□ -0.88
CBX3-201ENST00000337620 XAGE1AQ9HD64 81 aa9.57□□□□□ -0.88
CBX3-201ENST00000337620 RNF151Q2KHN1 245 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms