RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 CNBPP62633 177 aaKnown RBP11.36□□□□□ -0.59
CHGA-202ENST00000334654 Q8IZM0 81 aa11.36□□□□□ -0.59
CHGA-202ENST00000334654 STPG4Q8N801 248 aa11.36□□□□□ -0.59
CHGA-202ENST00000334654 SLC25A34Q6PIV7 304 aa11.35□□□□□ -0.59
CHGA-202ENST00000334654 C2orf48Q96LS8 159 aa11.35□□□□□ -0.59
CHGA-202ENST00000334654 PCP4L1A6NKN8 68 aa11.34□□□□□ -0.59
CHGA-202ENST00000334654 E9PLD3 99 aa11.34□□□□□ -0.59
CHGA-202ENST00000334654 COX7B2Q8TF08 81 aa11.34□□□□□ -0.59
CHGA-202ENST00000334654 PGPEP1Q9NXJ5 209 aa11.34□□□□□ -0.59
CHGA-202ENST00000334654 TOMM7Q9P0U1 55 aa11.34□□□□□ -0.59
CHGA-202ENST00000334654 DNAH5Q8TE73 4624 aa11.34□□□□□ -0.59
CHGA-202ENST00000334654 PKHD1P08F94 4074 aa11.33□□□□□ -0.59
CHGA-202ENST00000334654 ANKRD39Q53RE8 183 aa11.33□□□□□ -0.6
CHGA-202ENST00000334654 C10orf25Q5T742 122 aa11.33□□□□□ -0.6
CHGA-202ENST00000334654 C2orf82Q6UX34 121 aa11.33□□□□□ -0.6
CHGA-202ENST00000334654 C6orf226Q5I0X4 101 aa11.32□□□□□ -0.6
CHGA-202ENST00000334654 UNQ6190/PRO20217Q6UXQ8 127 aa11.32□□□□□ -0.6
CHGA-202ENST00000334654 Q6ZRU5 148 aa11.32□□□□□ -0.6
CHGA-202ENST00000334654 BOD1L2Q8IYS8 172 aa11.32□□□□□ -0.6
CHGA-202ENST00000334654 SYCNQ0VAF6 134 aa11.32□□□□□ -0.6
CHGA-202ENST00000334654 C9orf163Q8N9P6 203 aa11.32□□□□□ -0.6
CHGA-202ENST00000334654 C14orf144Q96I85 54 aa11.32□□□□□ -0.6
CHGA-202ENST00000334654 CAMK2N2Q96S95 79 aa11.32□□□□□ -0.6
CHGA-202ENST00000334654 IGLV5-52A0A0A0MRZ9 124 aa11.31□□□□□ -0.6
CHGA-202ENST00000334654 F8WDY8 70 aa11.31□□□□□ -0.6
CHGA-202ENST00000334654 PRSS2P07478 247 aa11.31□□□□□ -0.6
CHGA-202ENST00000334654 TSPEAR-AS2P59090 65 aa11.3□□□□□ -0.6
CHGA-202ENST00000334654 LINC01620Q4KN68 170 aa11.3□□□□□ -0.6
CHGA-202ENST00000334654 EPPK1P58107 5090 aaKnown RBP11.29□□□□□ -0.6
CHGA-202ENST00000334654 NDUFA1O15239 70 aa11.29□□□□□ -0.6
CHGA-202ENST00000334654 LEPROTO15243 131 aa11.29□□□□□ -0.6
CHGA-202ENST00000334654 CARD19Q96LW7 228 aa11.29□□□□□ -0.6
CHGA-202ENST00000334654 NMUP48645 174 aa11.28□□□□□ -0.6
CHGA-202ENST00000334654 PLEKHB2Q96CS7 222 aa11.28□□□□□ -0.6
CHGA-202ENST00000334654 C6orf48Q9UBA6 75 aa11.28□□□□□ -0.6
CHGA-202ENST00000334654 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.27□□□□□ -0.6
CHGA-202ENST00000334654 ZNF625Q96I27 306 aaPredicted RBP11.27□□□□□ -0.6
CHGA-202ENST00000334654 IGKV2D-26A0A0A0MRZ7 120 aa11.26□□□□□ -0.61
CHGA-202ENST00000334654 CXCL5P42830 114 aa11.26□□□□□ -0.61
CHGA-202ENST00000334654 HNRNPA3P51991 378 aaKnown RBP11.26□□□□□ -0.61
CHGA-202ENST00000334654 CKS1BP61024 79 aa11.26□□□□□ -0.61
CHGA-202ENST00000334654 RNF151Q2KHN1 245 aa11.26□□□□□ -0.61
CHGA-202ENST00000334654 SDIM1Q6ZPB5 146 aa11.26□□□□□ -0.61
CHGA-202ENST00000334654 J3QQQ9 107 aa11.25□□□□□ -0.61
CHGA-202ENST00000334654 HIGD1BQ9P298 99 aa11.25□□□□□ -0.61
CHGA-202ENST00000334654 TRBV30A0A0K0K1B3 111 aa11.25□□□□□ -0.61
CHGA-202ENST00000334654 GCSHP23434 173 aa11.25□□□□□ -0.61
CHGA-202ENST00000334654 KRTAP10-1P60331 282 aa11.25□□□□□ -0.61
CHGA-202ENST00000334654 C9orf116Q5BN46 136 aaPredicted RBP11.25□□□□□ -0.61
CHGA-202ENST00000334654 DYNC1H1Q14204 4646 aaKnown RBP11.24□□□□□ -0.61
CHGA-202ENST00000334654 MYMXA0A1B0GTQ4 84 aa11.23□□□□□ -0.61
CHGA-202ENST00000334654 LINC00587B1AMM8 73 aa11.23□□□□□ -0.61
CHGA-202ENST00000334654 PCP2Q8IVA1 136 aa11.23□□□□□ -0.61
CHGA-202ENST00000334654 C16orf90A8MZG2 172 aa11.22□□□□□ -0.61
CHGA-202ENST00000334654 NDUFA12Q9UI09 145 aa11.22□□□□□ -0.61
CHGA-202ENST00000334654 LRP1BQ9NZR2 4599 aa11.21□□□□□ -0.61
CHGA-202ENST00000334654 LGALS3P17931 250 aaKnown RBP11.21□□□□□ -0.61
CHGA-202ENST00000334654 LBHQ53QV2 105 aaPredicted RBP11.21□□□□□ -0.61
CHGA-202ENST00000334654 TTTY13Q9BZ97 58 aa11.21□□□□□ -0.61
CHGA-202ENST00000334654 TLX1NBP0CAT3 122 aa11.2□□□□□ -0.62
CHGA-202ENST00000334654 CTAG1AP78358 180 aa11.19□□□□□ -0.62
CHGA-202ENST00000334654 SFTA2Q6UW10 78 aa11.19□□□□□ -0.62
CHGA-202ENST00000334654 FAM30AQ9NZY2 134 aa11.19□□□□□ -0.62
CHGA-202ENST00000334654 PANO1I0J062 215 aa11.19□□□□□ -0.62
CHGA-202ENST00000334654 M0R143 59 aa11.19□□□□□ -0.62
CHGA-202ENST00000334654 TAL2Q16559 108 aa11.19□□□□□ -0.62
CHGA-202ENST00000334654 C2orf91Q6ZV80 131 aa11.19□□□□□ -0.62
CHGA-202ENST00000334654 DNAH8Q96JB1 4490 aa11.18□□□□□ -0.62
CHGA-202ENST00000334654 A0A096LNI7 61 aa11.18□□□□□ -0.62
CHGA-202ENST00000334654 LOC107984640A0A0U1RRK4 108 aa11.18□□□□□ -0.62
CHGA-202ENST00000334654 ZNF815PA8K554 130 aa11.18□□□□□ -0.62
CHGA-202ENST00000334654 Q6ZRP5 223 aa11.18□□□□□ -0.62
CHGA-202ENST00000334654 Q6ZSA8 131 aa11.18□□□□□ -0.62
CHGA-202ENST00000334654 HERV-K104P63124 156 aa11.17□□□□□ -0.62
CHGA-202ENST00000334654 NDUFC2-KCTD14E9PQ53 114 aa11.16□□□□□ -0.62
CHGA-202ENST00000334654 CHTF8P0CG12 524 aa11.16□□□□□ -0.62
CHGA-202ENST00000334654 CIRBPQ14011 172 aaKnown RBP11.16□□□□□ -0.62
CHGA-202ENST00000334654 ERG28Q9UKR5 140 aa11.16□□□□□ -0.62
CHGA-202ENST00000334654 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.16□□□□□ -0.62
CHGA-202ENST00000334654 HSD52Q0P140 79 aa11.15□□□□□ -0.62
CHGA-202ENST00000334654 PTTG1IPP53801 180 aa11.14□□□□□ -0.63
CHGA-202ENST00000334654 SCGB1D4Q6XE38 83 aa11.14□□□□□ -0.63
CHGA-202ENST00000334654 A0A0J9YXY3 114 aa11.13□□□□□ -0.63
CHGA-202ENST00000334654 PFN2P35080 140 aa11.13□□□□□ -0.63
CHGA-202ENST00000334654 RPL18AQ02543 176 aaKnown RBP11.13□□□□□ -0.63
CHGA-202ENST00000334654 GAGE2BQ13066 116 aa11.13□□□□□ -0.63
CHGA-202ENST00000334654 COX17Q14061 63 aa11.13□□□□□ -0.63
CHGA-202ENST00000334654 SMIM13P0DJ93 91 aa11.12□□□□□ -0.63
CHGA-202ENST00000334654 Q6ZVH6 145 aa11.12□□□□□ -0.63
CHGA-202ENST00000334654 SPACA4Q8TDM5 124 aa11.12□□□□□ -0.63
CHGA-202ENST00000334654 SPANXB1Q9NS25 103 aaPredicted RBP11.12□□□□□ -0.63
CHGA-202ENST00000334654 IGKV2-24A0A0C4DH68 120 aa11.12□□□□□ -0.63
CHGA-202ENST00000334654 TIMM17BO60830 172 aa11.12□□□□□ -0.63
CHGA-202ENST00000334654 GAGE2EQ4V326 116 aa11.12□□□□□ -0.63
CHGA-202ENST00000334654 GAGE2DQ9UEU5 116 aa11.12□□□□□ -0.63
CHGA-202ENST00000334654 PKIGQ9Y2B9 76 aa11.12□□□□□ -0.63
CHGA-202ENST00000334654 A0A0U1RRA0 63 aa11.11□□□□□ -0.63
CHGA-202ENST00000334654 C9orf129Q5T035 196 aaKnown RBP11.11□□□□□ -0.63
CHGA-202ENST00000334654 MEIG1Q5JSS6 88 aa11.1□□□□□ -0.63
CHGA-202ENST00000334654 LITAFQ99732 161 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms