RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 CARD19Q96LW7 228 aa12.11□□□□□ -0.47
TSSC4-201ENST00000333256 PGPEP1Q9NXJ5 209 aa12.11□□□□□ -0.47
TSSC4-201ENST00000333256 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.1□□□□□ -0.47
TSSC4-201ENST00000333256 JOSD1Q15040 202 aaPredicted RBP12.1□□□□□ -0.47
TSSC4-201ENST00000333256 PKHD1P08F94 4074 aa12.1□□□□□ -0.47
TSSC4-201ENST00000333256 LEPROTO15243 131 aa12.1□□□□□ -0.47
TSSC4-201ENST00000333256 ANKRD39Q53RE8 183 aa12.1□□□□□ -0.47
TSSC4-201ENST00000333256 IGKV2D-26A0A0A0MRZ7 120 aa12.09□□□□□ -0.47
TSSC4-201ENST00000333256 E9PLD3 99 aa12.09□□□□□ -0.47
TSSC4-201ENST00000333256 PYY3Q5JQD4 70 aa12.09□□□□□ -0.47
TSSC4-201ENST00000333256 C6orf48Q9UBA6 75 aa12.09□□□□□ -0.47
TSSC4-201ENST00000333256 DNAH5Q8TE73 4624 aa12.08□□□□□ -0.48
TSSC4-201ENST00000333256 J3QQQ9 107 aa12.08□□□□□ -0.48
TSSC4-201ENST00000333256 C9orf116Q5BN46 136 aaPredicted RBP12.08□□□□□ -0.48
TSSC4-201ENST00000333256 C9orf163Q8N9P6 203 aa12.08□□□□□ -0.48
TSSC4-201ENST00000333256 ZNF625Q96I27 306 aaPredicted RBP12.08□□□□□ -0.48
TSSC4-201ENST00000333256 PLEKHB2Q96CS7 222 aa12.07□□□□□ -0.48
TSSC4-201ENST00000333256 EPPK1P58107 5090 aaKnown RBP12.07□□□□□ -0.48
TSSC4-201ENST00000333256 CXCL5P42830 114 aa12.06□□□□□ -0.48
TSSC4-201ENST00000333256 CDPF1Q6NVV7 123 aa12.06□□□□□ -0.48
TSSC4-201ENST00000333256 LGALS3P17931 250 aaKnown RBP12.06□□□□□ -0.48
TSSC4-201ENST00000333256 TTTY13Q9BZ97 58 aa12.06□□□□□ -0.48
TSSC4-201ENST00000333256 F8WDY8 70 aa12.05□□□□□ -0.48
TSSC4-201ENST00000333256 NMUP48645 174 aa12.05□□□□□ -0.48
TSSC4-201ENST00000333256 NDUFA12Q9UI09 145 aa12.05□□□□□ -0.48
TSSC4-201ENST00000333256 C16orf90A8MZG2 172 aa12.04□□□□□ -0.48
TSSC4-201ENST00000333256 HSBP1L1C9JCN9 74 aa12.04□□□□□ -0.48
TSSC4-201ENST00000333256 GCSHP23434 173 aa12.04□□□□□ -0.48
TSSC4-201ENST00000333256 TRBV30A0A0K0K1B3 111 aa12.03□□□□□ -0.48
TSSC4-201ENST00000333256 LOC105371267A0A1B0GV96 52 aa12.03□□□□□ -0.48
TSSC4-201ENST00000333256 KRTAP10-1P60331 282 aa12.02□□□□□ -0.49
TSSC4-201ENST00000333256 SDIM1Q6ZPB5 146 aa12.01□□□□□ -0.49
TSSC4-201ENST00000333256 MYMXA0A1B0GTQ4 84 aa12□□□□□ -0.49
TSSC4-201ENST00000333256 PAM16Q9Y3D7 125 aa12□□□□□ -0.49
TSSC4-201ENST00000333256 PFN2P35080 140 aa12□□□□□ -0.49
TSSC4-201ENST00000333256 RPL18AQ02543 176 aaKnown RBP12□□□□□ -0.49
TSSC4-201ENST00000333256 RNF151Q2KHN1 245 aa12□□□□□ -0.49
TSSC4-201ENST00000333256 PCP2Q8IVA1 136 aa12□□□□□ -0.49
TSSC4-201ENST00000333256 A0A0U1RRA0 63 aa11.99□□□□□ -0.49
TSSC4-201ENST00000333256 VAMP8Q9BV40 100 aa11.99□□□□□ -0.49
TSSC4-201ENST00000333256 DYNC1H1Q14204 4646 aaKnown RBP11.98□□□□□ -0.49
TSSC4-201ENST00000333256 IGKV2-24A0A0C4DH68 120 aa11.98□□□□□ -0.49
TSSC4-201ENST00000333256 ZNF815PA8K554 130 aa11.98□□□□□ -0.49
TSSC4-201ENST00000333256 CHTF8P0CG12 524 aa11.98□□□□□ -0.49
TSSC4-201ENST00000333256 SFTA2Q6UW10 78 aa11.98□□□□□ -0.49
TSSC4-201ENST00000333256 Q6ZRP5 223 aa11.98□□□□□ -0.49
TSSC4-201ENST00000333256 ERG28Q9UKR5 140 aa11.98□□□□□ -0.49
TSSC4-201ENST00000333256 A0A096LNI7 61 aa11.97□□□□□ -0.49
TSSC4-201ENST00000333256 LOC107984640A0A0U1RRK4 108 aa11.97□□□□□ -0.49
TSSC4-201ENST00000333256 GAGE2BQ13066 116 aa11.97□□□□□ -0.49
TSSC4-201ENST00000333256 PANO1I0J062 215 aa11.97□□□□□ -0.49
TSSC4-201ENST00000333256 HERV-K104P63124 156 aa11.97□□□□□ -0.49
TSSC4-201ENST00000333256 GAGE2EQ4V326 116 aa11.97□□□□□ -0.49
TSSC4-201ENST00000333256 SPATA45Q537H7 98 aa11.97□□□□□ -0.49
TSSC4-201ENST00000333256 MEIG1Q5JSS6 88 aa11.97□□□□□ -0.49
TSSC4-201ENST00000333256 GAGE2DQ9UEU5 116 aa11.97□□□□□ -0.49
TSSC4-201ENST00000333256 NDUFC2-KCTD14E9PQ53 114 aa11.96□□□□□ -0.5
TSSC4-201ENST00000333256 FAM30AQ9NZY2 134 aa11.96□□□□□ -0.5
TSSC4-201ENST00000333256 TP73-AS1Q9UF72 201 aa11.96□□□□□ -0.5
TSSC4-201ENST00000333256 LRP1BQ9NZR2 4599 aa11.96□□□□□ -0.5
TSSC4-201ENST00000333256 SMIM13P0DJ93 91 aa11.95□□□□□ -0.5
TSSC4-201ENST00000333256 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.95□□□□□ -0.5
TSSC4-201ENST00000333256 A0A0J9YXY3 114 aa11.94□□□□□ -0.5
TSSC4-201ENST00000333256 LINC00158P58513 81 aa11.94□□□□□ -0.5
TSSC4-201ENST00000333256 TLX1NBP0CAT3 122 aa11.94□□□□□ -0.5
TSSC4-201ENST00000333256 PTTG1IPP53801 180 aa11.94□□□□□ -0.5
TSSC4-201ENST00000333256 HAMPP81172 84 aa11.93□□□□□ -0.5
TSSC4-201ENST00000333256 XAGE1AQ9HD64 81 aa11.93□□□□□ -0.5
TSSC4-201ENST00000333256 DAND5Q8N907 189 aa11.92□□□□□ -0.5
TSSC4-201ENST00000333256 C14orf144Q96I85 54 aa11.92□□□□□ -0.5
TSSC4-201ENST00000333256 DPH3Q96FX2 82 aa11.91□□□□□ -0.5
TSSC4-201ENST00000333256 COX17Q14061 63 aa11.91□□□□□ -0.5
TSSC4-201ENST00000333256 SCGB1D4Q6XE38 83 aa11.91□□□□□ -0.5
TSSC4-201ENST00000333256 PKIGQ9Y2B9 76 aa11.9□□□□□ -0.5
TSSC4-201ENST00000333256 C9orf129Q5T035 196 aaKnown RBP11.89□□□□□ -0.51
TSSC4-201ENST00000333256 MIR7-3HGQ8N6C7 128 aa11.89□□□□□ -0.51
TSSC4-201ENST00000333256 SPACA4Q8TDM5 124 aa11.89□□□□□ -0.51
TSSC4-201ENST00000333256 SMIM6P0DI80 62 aa11.88□□□□□ -0.51
TSSC4-201ENST00000333256 COX8AP10176 69 aa11.88□□□□□ -0.51
TSSC4-201ENST00000333256 ADAMTSL4-AS1Q5T5F5 129 aa11.88□□□□□ -0.51
TSSC4-201ENST00000333256 Q6ZSA8 131 aa11.88□□□□□ -0.51
TSSC4-201ENST00000333256 SND1-IT1Q9HBX3 110 aa11.88□□□□□ -0.51
TSSC4-201ENST00000333256 S100A12P80511 92 aa11.87□□□□□ -0.51
TSSC4-201ENST00000333256 FAM168BA1KXE4 195 aa11.87□□□□□ -0.51
TSSC4-201ENST00000333256 LINC00587B1AMM8 73 aa11.87□□□□□ -0.51
TSSC4-201ENST00000333256 BOD1L2Q8IYS8 172 aa11.87□□□□□ -0.51
TSSC4-201ENST00000333256 LITAFQ99732 161 aa11.87□□□□□ -0.51
TSSC4-201ENST00000333256 CIRBPQ14011 172 aaKnown RBP11.86□□□□□ -0.51
TSSC4-201ENST00000333256 LINC00474Q9P2X8 69 aa11.86□□□□□ -0.51
TSSC4-201ENST00000333256 NPC2P61916 151 aa11.85□□□□□ -0.51
TSSC4-201ENST00000333256 DNAH8Q96JB1 4490 aa11.85□□□□□ -0.51
TSSC4-201ENST00000333256 A0A087WYN8 130 aa11.84□□□□□ -0.51
TSSC4-201ENST00000333256 SCXQ7RTU7 201 aa11.84□□□□□ -0.51
TSSC4-201ENST00000333256 A0A1W2PNN7 141 aa11.84□□□□□ -0.51
TSSC4-201ENST00000333256 CIRBP-AS1Q8TBR5 109 aa11.84□□□□□ -0.51
TSSC4-201ENST00000333256 SLC25A34Q6PIV7 304 aa11.83□□□□□ -0.52
TSSC4-201ENST00000333256 FAM19A5Q7Z5A7 132 aaPredicted RBP11.83□□□□□ -0.52
TSSC4-201ENST00000333256 EIF4EBP3O60516 100 aaPredicted RBP11.82□□□□□ -0.52
TSSC4-201ENST00000333256 TIMM17BO60830 172 aa11.82□□□□□ -0.52
TSSC4-201ENST00000333256 APOBP04114 4563 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms