RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 CD164L2Q6UWJ8 174 aa13.61□□□□□ -0.23
NPLOC4-201ENST00000331134 Q6JHZ5 121 aa13.61□□□□□ -0.23
NPLOC4-201ENST00000331134 WDFY4Q6ZS81 3184 aa13.6□□□□□ -0.23
NPLOC4-201ENST00000331134 LRCOL1A6NCL2 159 aa13.6□□□□□ -0.23
NPLOC4-201ENST00000331134 UNQ6190/PRO20217Q6UXQ8 127 aa13.6□□□□□ -0.23
NPLOC4-201ENST00000331134 UBE2AP49459 152 aa13.6□□□□□ -0.23
NPLOC4-201ENST00000331134 NTM-AS1Q6ZSK4 140 aa13.6□□□□□ -0.23
NPLOC4-201ENST00000331134 FAM19A5Q7Z5A7 132 aaPredicted RBP13.6□□□□□ -0.23
NPLOC4-201ENST00000331134 SVIPQ8NHG7 77 aa13.59□□□□□ -0.23
NPLOC4-201ENST00000331134 PPDPFQ9H3Y8 114 aa13.59□□□□□ -0.23
NPLOC4-201ENST00000331134 Q9UF83 564 aa13.59□□□□□ -0.23
NPLOC4-201ENST00000331134 CELA1Q9UNI1 258 aa13.59□□□□□ -0.23
NPLOC4-201ENST00000331134 FAM19A1Q7Z5A9 133 aa13.59□□□□□ -0.23
NPLOC4-201ENST00000331134 NDUFC2-KCTD14E9PQ53 114 aa13.59□□□□□ -0.23
NPLOC4-201ENST00000331134 RPL28P46779 137 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-201ENST00000331134 LINC00846Q9NV44 126 aa13.58□□□□□ -0.24
NPLOC4-201ENST00000331134 SHISA2Q6UWI4 295 aa13.58□□□□□ -0.24
NPLOC4-201ENST00000331134 WFDC10BQ8IUB3 73 aa13.58□□□□□ -0.24
NPLOC4-201ENST00000331134 Q8N2B8 174 aa13.58□□□□□ -0.24
NPLOC4-201ENST00000331134 A8MTW9 85 aa13.57□□□□□ -0.24
NPLOC4-201ENST00000331134 SMIM9A6NGZ8 99 aa13.57□□□□□ -0.24
NPLOC4-201ENST00000331134 PLA2G2AP14555 144 aa13.57□□□□□ -0.24
NPLOC4-201ENST00000331134 SOSTDC1Q6X4U4 206 aa13.57□□□□□ -0.24
NPLOC4-201ENST00000331134 FAM19A3Q7Z5A8 133 aa13.57□□□□□ -0.24
NPLOC4-201ENST00000331134 A0A0J9YWU9 116 aa13.56□□□□□ -0.24
NPLOC4-201ENST00000331134 LINC00315P59091 139 aa13.56□□□□□ -0.24
NPLOC4-201ENST00000331134 CYSRT1A8MQ03 144 aa13.55□□□□□ -0.24
NPLOC4-201ENST00000331134 WFDC13Q8IUB5 93 aa13.55□□□□□ -0.24
NPLOC4-201ENST00000331134 HILS1P60008 231 aa13.55□□□□□ -0.24
NPLOC4-201ENST00000331134 LINC00337Q8N6G1 96 aa13.55□□□□□ -0.24
NPLOC4-201ENST00000331134 LYRM9A8MSI8 78 aa13.55□□□□□ -0.24
NPLOC4-201ENST00000331134 LINC01006Q8NI28 216 aa13.55□□□□□ -0.24
NPLOC4-201ENST00000331134 MGAM2Q2M2H8 2515 aa13.54□□□□□ -0.24
NPLOC4-201ENST00000331134 SPTBN5Q9NRC6 3674 aaKnown RBP13.53□□□□□ -0.24
NPLOC4-201ENST00000331134 RPL37AP8A6NKH3 93 aa13.52□□□□□ -0.25
NPLOC4-201ENST00000331134 SYCNQ0VAF6 134 aa13.52□□□□□ -0.25
NPLOC4-201ENST00000331134 Q8N814 137 aa13.52□□□□□ -0.25
NPLOC4-201ENST00000331134 CHKB-CPT1BH3BT56 60 aa13.51□□□□□ -0.25
NPLOC4-201ENST00000331134 ZNF73O43830 326 aaPredicted RBP13.51□□□□□ -0.25
NPLOC4-201ENST00000331134 Q8IZM0 81 aa13.51□□□□□ -0.25
NPLOC4-201ENST00000331134 VPS13AQ96RL7 3174 aa13.5□□□□□ -0.25
NPLOC4-201ENST00000331134 A0A087WZ39 114 aa13.5□□□□□ -0.25
NPLOC4-201ENST00000331134 IGKV4-1P06312 121 aa13.49□□□□□ -0.25
NPLOC4-201ENST00000331134 TRBV10-3A0A0K0K1G6 114 aa13.48□□□□□ -0.25
NPLOC4-201ENST00000331134 Q8N3U1 123 aa13.48□□□□□ -0.25
NPLOC4-201ENST00000331134 C11orf45Q8TAV5 145 aa13.48□□□□□ -0.25
NPLOC4-201ENST00000331134 ZNF843Q8N446 348 aa13.48□□□□□ -0.25
NPLOC4-201ENST00000331134 FAM30AQ9NZY2 134 aa13.48□□□□□ -0.25
NPLOC4-201ENST00000331134 DEFB131BA0A096LNP1 70 aa13.48□□□□□ -0.25
NPLOC4-201ENST00000331134 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.47□□□□□ -0.25
NPLOC4-201ENST00000331134 MIFP14174 115 aa13.47□□□□□ -0.25
NPLOC4-201ENST00000331134 MAST4O15021 2626 aa13.46□□□□□ -0.25
NPLOC4-201ENST00000331134 LINC01546A6NGU7 62 aa13.46□□□□□ -0.25
NPLOC4-201ENST00000331134 PRORYQ9H606 182 aa13.46□□□□□ -0.26
NPLOC4-201ENST00000331134 NANOS2P60321 138 aaKnown RBP13.45□□□□□ -0.26
NPLOC4-201ENST00000331134 MGAQ8IWI9 3026 aa13.45□□□□□ -0.26
NPLOC4-201ENST00000331134 KRTAP10-9P60411 292 aa13.44□□□□□ -0.26
NPLOC4-201ENST00000331134 C6orf223Q8N319 242 aa13.44□□□□□ -0.26
NPLOC4-201ENST00000331134 TRAV7A0A075B6U4 112 aa13.44□□□□□ -0.26
NPLOC4-201ENST00000331134 SMIM26A0A096LP01 95 aa13.43□□□□□ -0.26
NPLOC4-201ENST00000331134 NDUFC1O43677 76 aa13.43□□□□□ -0.26
NPLOC4-201ENST00000331134 CELSR3Q9NYQ7 3312 aa13.42□□□□□ -0.26
NPLOC4-201ENST00000331134 KPRPQ5T749 579 aaPredicted RBP13.42□□□□□ -0.26
NPLOC4-201ENST00000331134 TRBV7-7A0A0K0K1E9 115 aa13.42□□□□□ -0.26
NPLOC4-201ENST00000331134 M0R378 163 aa13.42□□□□□ -0.26
NPLOC4-201ENST00000331134 FAM218AQ96MZ4 157 aa13.42□□□□□ -0.26
NPLOC4-201ENST00000331134 INAFM1C9JVW0 142 aa13.41□□□□□ -0.26
NPLOC4-201ENST00000331134 CSDC2Q9Y534 153 aaKnown RBP13.41□□□□□ -0.26
NPLOC4-201ENST00000331134 FHL2Q14192 279 aa13.4□□□□□ -0.26
NPLOC4-201ENST00000331134 BEAN1Q3B7T3 259 aa13.4□□□□□ -0.26
NPLOC4-201ENST00000331134 LELP1Q5T871 98 aa13.4□□□□□ -0.27
NPLOC4-201ENST00000331134 V9GYY9 64 aa13.4□□□□□ -0.27
NPLOC4-201ENST00000331134 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.39□□□□□ -0.27
NPLOC4-201ENST00000331134 Q8N9L7 120 aa13.38□□□□□ -0.27
NPLOC4-201ENST00000331134 COX17Q14061 63 aa13.38□□□□□ -0.27
NPLOC4-201ENST00000331134 FHL3Q13643 280 aa13.38□□□□□ -0.27
NPLOC4-201ENST00000331134 HECTD1Q9ULT8 2610 aa13.38□□□□□ -0.27
NPLOC4-201ENST00000331134 KIR2DL5BQ8NHK3 375 aa13.36□□□□□ -0.27
NPLOC4-201ENST00000331134 Q6ZVQ6 151 aa13.36□□□□□ -0.27
NPLOC4-201ENST00000331134 IGLV5-39A0A0G2JS06 123 aa13.35□□□□□ -0.27
NPLOC4-201ENST00000331134 SERP1Q9Y6X1 66 aa13.35□□□□□ -0.27
NPLOC4-201ENST00000331134 C1orf195Q5TG92 126 aa13.34□□□□□ -0.27
NPLOC4-201ENST00000331134 SBSPONQ8IVN8 264 aa13.33□□□□□ -0.27
NPLOC4-201ENST00000331134 C11orf72Q8NBR9 251 aa13.32□□□□□ -0.28
NPLOC4-201ENST00000331134 NBEAQ8NFP9 2946 aa13.32□□□□□ -0.28
NPLOC4-201ENST00000331134 LINC00575Q6W349 94 aa13.32□□□□□ -0.28
NPLOC4-201ENST00000331134 B9D2Q9BPU9 175 aa13.32□□□□□ -0.28
NPLOC4-201ENST00000331134 MRPL55Q7Z7F7 128 aaKnown RBP13.31□□□□□ -0.28
NPLOC4-201ENST00000331134 A6NED7 52 aa13.31□□□□□ -0.28
NPLOC4-201ENST00000331134 SMR3AQ99954 134 aa13.31□□□□□ -0.28
NPLOC4-201ENST00000331134 EIF4EBP3O60516 100 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-201ENST00000331134 IGHV3OR16-9A0A0B4J2B5 98 aa13.31□□□□□ -0.28
NPLOC4-201ENST00000331134 ATP5EP56381 51 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-201ENST00000331134 SPINK6Q6UWN8 80 aa13.31□□□□□ -0.28
NPLOC4-201ENST00000331134 CHD6Q8TD26 2715 aa13.3□□□□□ -0.28
NPLOC4-201ENST00000331134 FAM19A4Q96LR4 140 aa13.3□□□□□ -0.28
NPLOC4-201ENST00000331134 LINC01547P58512 204 aaPredicted RBP13.3□□□□□ -0.28
NPLOC4-201ENST00000331134 LINC00208Q96KT6 92 aa13.3□□□□□ -0.28
NPLOC4-201ENST00000331134 DEFB116Q30KQ4 102 aa13.29□□□□□ -0.28
NPLOC4-201ENST00000331134 OXLD1Q5BKU9 147 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms