RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 ATP5G1P05496 136 aa12.68□□□□□ -0.38
SHISA3-201ENST00000319234 MRPL23Q16540 153 aaKnown RBP12.68□□□□□ -0.38
SHISA3-201ENST00000319234 CHCHD5Q9BSY4 110 aa12.68□□□□□ -0.38
SHISA3-201ENST00000319234 TRAV13-2A0A0B4J235 113 aa12.67□□□□□ -0.38
SHISA3-201ENST00000319234 TRACP01848 142 aa12.67□□□□□ -0.38
SHISA3-201ENST00000319234 IGHV3OR16-9A0A0B4J2B5 98 aa12.65□□□□□ -0.38
SHISA3-201ENST00000319234 Q6Q795 121 aa12.65□□□□□ -0.38
SHISA3-201ENST00000319234 FBN1P35555 2871 aaKnown RBP12.65□□□□□ -0.38
SHISA3-201ENST00000319234 IGLV4-60A0A075B6I1 120 aa12.65□□□□□ -0.38
SHISA3-201ENST00000319234 A0A087WZ39 114 aa12.64□□□□□ -0.39
SHISA3-201ENST00000319234 GAGE2BQ13066 116 aa12.63□□□□□ -0.39
SHISA3-201ENST00000319234 GAGE2EQ4V326 116 aa12.63□□□□□ -0.39
SHISA3-201ENST00000319234 MIR7-3HGQ8N6C7 128 aa12.63□□□□□ -0.39
SHISA3-201ENST00000319234 GAGE2DQ9UEU5 116 aa12.63□□□□□ -0.39
SHISA3-201ENST00000319234 IBA57-AS1B1ANH7 110 aa12.62□□□□□ -0.39
SHISA3-201ENST00000319234 CRPP02741 224 aa12.62□□□□□ -0.39
SHISA3-201ENST00000319234 RPL28P46779 137 aaKnown RBP12.62□□□□□ -0.39
SHISA3-201ENST00000319234 TRAV26-1A0A087WT03 109 aa12.61□□□□□ -0.39
SHISA3-201ENST00000319234 A0A096LPF7 62 aa12.61□□□□□ -0.39
SHISA3-201ENST00000319234 TOMM7Q9P0U1 55 aa12.61□□□□□ -0.39
SHISA3-201ENST00000319234 CMYA5Q8N3K9 4069 aa12.61□□□□□ -0.39
SHISA3-201ENST00000319234 C15orf53Q8NAA6 179 aa12.61□□□□□ -0.39
SHISA3-201ENST00000319234 NBEAL2Q6ZNJ1 2754 aa12.61□□□□□ -0.39
SHISA3-201ENST00000319234 RETNQ9HD89 108 aa12.6□□□□□ -0.39
SHISA3-201ENST00000319234 IGKV3OR2-268A0A0C4DH90 116 aa12.6□□□□□ -0.39
SHISA3-201ENST00000319234 A0A1B0GUV1 79 aa12.6□□□□□ -0.39
SHISA3-201ENST00000319234 ACYP1P07311 99 aa12.6□□□□□ -0.39
SHISA3-201ENST00000319234 SND1-IT1Q9HBX3 110 aa12.6□□□□□ -0.39
SHISA3-201ENST00000319234 LINC00959A0A1B0GUT2 108 aa12.59□□□□□ -0.39
SHISA3-201ENST00000319234 HTN3P15516 51 aa12.59□□□□□ -0.39
SHISA3-201ENST00000319234 LINC00158P58513 81 aa12.58□□□□□ -0.4
SHISA3-201ENST00000319234 ANAPC13Q9BS18 74 aa12.58□□□□□ -0.4
SHISA3-201ENST00000319234 LINC01561Q8N1V8 128 aa12.57□□□□□ -0.4
SHISA3-201ENST00000319234 LINC00337Q8N6G1 96 aa12.57□□□□□ -0.4
SHISA3-201ENST00000319234 IGKV2-28A0A075B6P5 120 aa12.56□□□□□ -0.4
SHISA3-201ENST00000319234 IGKV2D-28P01615 120 aa12.56□□□□□ -0.4
SHISA3-201ENST00000319234 SS18Q15532 418 aa12.56□□□□□ -0.4
SHISA3-201ENST00000319234 STAB1Q9NY15 2570 aa12.55□□□□□ -0.4
SHISA3-201ENST00000319234 BAALC-AS2P0C853 105 aa12.55□□□□□ -0.4
SHISA3-201ENST00000319234 CCL18P55774 89 aa12.55□□□□□ -0.4
SHISA3-201ENST00000319234 C5orf38Q86SI9 138 aa12.55□□□□□ -0.4
SHISA3-201ENST00000319234 C11orf68Q9H3H3 251 aaKnown RBP12.55□□□□□ -0.4
SHISA3-201ENST00000319234 FAM218AQ96MZ4 157 aa12.54□□□□□ -0.4
SHISA3-201ENST00000319234 H0YGX0 51 aa12.52□□□□□ -0.4
SHISA3-201ENST00000319234 NDUFV3P56181 108 aaKnown RBP12.52□□□□□ -0.4
SHISA3-201ENST00000319234 TTC32Q5I0X7 151 aa12.52□□□□□ -0.4
SHISA3-201ENST00000319234 Q8IZM0 81 aa12.52□□□□□ -0.4
SHISA3-201ENST00000319234 C6orf226Q5I0X4 101 aa12.52□□□□□ -0.41
SHISA3-201ENST00000319234 DNAH3Q8TD57 4116 aa12.52□□□□□ -0.41
SHISA3-201ENST00000319234 INAFM2P0DMQ5 153 aa12.5□□□□□ -0.41
SHISA3-201ENST00000319234 LELP1Q5T871 98 aa12.5□□□□□ -0.41
SHISA3-201ENST00000319234 SMIM11BQ8TCY0 68 aa12.5□□□□□ -0.41
SHISA3-201ENST00000319234 TRBV7-7A0A0K0K1E9 115 aa12.5□□□□□ -0.41
SHISA3-201ENST00000319234 C22orf24Q9Y442 160 aa12.49□□□□□ -0.41
SHISA3-201ENST00000319234 H3BNG1 76 aa12.49□□□□□ -0.41
SHISA3-201ENST00000319234 MALP21145 153 aa12.49□□□□□ -0.41
SHISA3-201ENST00000319234 PFN2P35080 140 aa12.49□□□□□ -0.41
SHISA3-201ENST00000319234 NHLRC4P0CG21 123 aaPredicted RBP12.48□□□□□ -0.41
SHISA3-201ENST00000319234 XCL1P47992 114 aa12.48□□□□□ -0.41
SHISA3-201ENST00000319234 DNAL4O96015 105 aa12.47□□□□□ -0.41
SHISA3-201ENST00000319234 A0A0J9YWU9 116 aa12.47□□□□□ -0.41
SHISA3-201ENST00000319234 Q6ZTC4 211 aa12.47□□□□□ -0.41
SHISA3-201ENST00000319234 IMUPQ9GZP8 106 aa12.47□□□□□ -0.41
SHISA3-201ENST00000319234 LINC00269Q8N2A0 174 aa12.46□□□□□ -0.41
SHISA3-201ENST00000319234 CLPSL2Q6UWE3 100 aa12.45□□□□□ -0.42
SHISA3-201ENST00000319234 LYPD5Q6UWN5 251 aa12.45□□□□□ -0.42
SHISA3-201ENST00000319234 ANGP03950 147 aaKnown RBP12.45□□□□□ -0.42
SHISA3-201ENST00000319234 CXCL5P42830 114 aa12.45□□□□□ -0.42
SHISA3-201ENST00000319234 SDIM1Q6ZPB5 146 aa12.45□□□□□ -0.42
SHISA3-201ENST00000319234 PRB2P02812 416 aaPredicted RBP12.44□□□□□ -0.42
SHISA3-201ENST00000319234 CD164L2Q6UWJ8 174 aa12.44□□□□□ -0.42
SHISA3-201ENST00000319234 LINC00643Q86TS7 51 aa12.44□□□□□ -0.42
SHISA3-201ENST00000319234 Q8N3U1 123 aa12.44□□□□□ -0.42
SHISA3-201ENST00000319234 Q9HAA7 133 aa12.44□□□□□ -0.42
SHISA3-201ENST00000319234 KPRPQ5T749 579 aaPredicted RBP12.43□□□□□ -0.42
SHISA3-201ENST00000319234 COL6A5A8TX70 2615 aa12.43□□□□□ -0.42
SHISA3-201ENST00000319234 A0A087WYN8 130 aa12.43□□□□□ -0.42
SHISA3-201ENST00000319234 K7EIL1 84 aa12.43□□□□□ -0.42
SHISA3-201ENST00000319234 REG3AQ06141 175 aa12.43□□□□□ -0.42
SHISA3-201ENST00000319234 COX17Q14061 63 aa12.43□□□□□ -0.42
SHISA3-201ENST00000319234 C11orf45Q8TAV5 145 aa12.43□□□□□ -0.42
SHISA3-201ENST00000319234 PKD1L1Q8TDX9 2849 aa12.42□□□□□ -0.42
SHISA3-201ENST00000319234 NANOS2P60321 138 aaKnown RBP12.41□□□□□ -0.42
SHISA3-201ENST00000319234 OR13C6PQ8NH95 151 aa12.41□□□□□ -0.42
SHISA3-201ENST00000319234 ANK2Q01484 3957 aa12.41□□□□□ -0.42
SHISA3-201ENST00000319234 NDUFC2O95298 119 aa12.4□□□□□ -0.42
SHISA3-201ENST00000319234 CFAP161Q6P656 301 aa12.4□□□□□ -0.42
SHISA3-201ENST00000319234 CHCHD10Q8WYQ3 142 aaPredicted RBP12.4□□□□□ -0.42
SHISA3-201ENST00000319234 TM2D3Q9BRN9 247 aa12.4□□□□□ -0.42
SHISA3-201ENST00000319234 KIAA0087Q14695 138 aa12.39□□□□□ -0.43
SHISA3-201ENST00000319234 OBSCN-AS1Q96MR7 158 aa12.39□□□□□ -0.43
SHISA3-201ENST00000319234 DEFB131BA0A096LNP1 70 aa12.38□□□□□ -0.43
SHISA3-201ENST00000319234 A0A1B0GX51 115 aa12.38□□□□□ -0.43
SHISA3-201ENST00000319234 SMCR5Q8TEV8 140 aa12.38□□□□□ -0.43
SHISA3-201ENST00000319234 LECT2O14960 151 aa12.38□□□□□ -0.43
SHISA3-201ENST00000319234 MDFIQ99750 246 aa12.38□□□□□ -0.43
SHISA3-201ENST00000319234 PRR34Q9NV39 138 aa12.36□□□□□ -0.43
SHISA3-201ENST00000319234 IGLV10-54A0A075B6I4 117 aa12.36□□□□□ -0.43
SHISA3-201ENST00000319234 GAGE2AQ6NT46 116 aa12.36□□□□□ -0.43
SHISA3-201ENST00000319234 MUC7Q8TAX7 377 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms