RNA–Protein interactions for RNA: ENST00000317702.9

TUBB6-201, Transcript of tubulin beta 6 class V, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB6, Length 2,064 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-201ENST00000317702 RETNQ9HD89 108 aa19.66■□□□□ 0.74
TUBB6-201ENST00000317702 NTN5Q8WTR8 489 aaPredicted RBP19.64■□□□□ 0.74
TUBB6-201ENST00000317702 CDIP1Q9H305 208 aa19.64■□□□□ 0.74
TUBB6-201ENST00000317702 STAB1Q9NY15 2570 aa19.64■□□□□ 0.73
TUBB6-201ENST00000317702 XCL1P47992 114 aa19.64■□□□□ 0.73
TUBB6-201ENST00000317702 TRAV26-1A0A087WT03 109 aa19.63■□□□□ 0.73
TUBB6-201ENST00000317702 C2orf82Q6UX34 121 aa19.63■□□□□ 0.73
TUBB6-201ENST00000317702 LINC00158P58513 81 aa19.62■□□□□ 0.73
TUBB6-201ENST00000317702 CLPSL2Q6UWE3 100 aa19.62■□□□□ 0.73
TUBB6-201ENST00000317702 IBA57-AS1B1ANH7 110 aa19.61■□□□□ 0.73
TUBB6-201ENST00000317702 H3BT86 120 aa19.61■□□□□ 0.73
TUBB6-201ENST00000317702 HTN3P15516 51 aa19.61■□□□□ 0.73
TUBB6-201ENST00000317702 COX7A2LO14548 114 aa19.61■□□□□ 0.73
TUBB6-201ENST00000317702 C6orf226Q5I0X4 101 aa19.58■□□□□ 0.73
TUBB6-201ENST00000317702 SCGB1A1P11684 91 aa19.58■□□□□ 0.72
TUBB6-201ENST00000317702 SND1-IT1Q9HBX3 110 aa19.58■□□□□ 0.72
TUBB6-201ENST00000317702 TRAV13-2A0A0B4J235 113 aa19.57■□□□□ 0.72
TUBB6-201ENST00000317702 LINC01561Q8N1V8 128 aa19.56■□□□□ 0.72
TUBB6-201ENST00000317702 TEX49A0A1B0GTD5 131 aa19.56■□□□□ 0.72
TUBB6-201ENST00000317702 LINC00269Q8N2A0 174 aa19.55■□□□□ 0.72
TUBB6-201ENST00000317702 UBE2WQ96B02 151 aa19.55■□□□□ 0.72
TUBB6-201ENST00000317702 CRPP02741 224 aa19.55■□□□□ 0.72
TUBB6-201ENST00000317702 Q8IZM0 81 aa19.55■□□□□ 0.72
TUBB6-201ENST00000317702 PFN2P35080 140 aa19.54■□□□□ 0.72
TUBB6-201ENST00000317702 C11orf68Q9H3H3 251 aaKnown RBP19.54■□□□□ 0.72
TUBB6-201ENST00000317702 CCL18P55774 89 aa19.53■□□□□ 0.72
TUBB6-201ENST00000317702 IGKV2-28A0A075B6P5 120 aa19.53■□□□□ 0.72
TUBB6-201ENST00000317702 IGKV2D-28P01615 120 aa19.53■□□□□ 0.72
TUBB6-201ENST00000317702 LINC00337Q8N6G1 96 aa19.52■□□□□ 0.72
TUBB6-201ENST00000317702 DNAH3Q8TD57 4116 aa19.52■□□□□ 0.71
TUBB6-201ENST00000317702 ANGP03950 147 aaKnown RBP19.52■□□□□ 0.71
TUBB6-201ENST00000317702 MRPL23Q16540 153 aaKnown RBP19.52■□□□□ 0.71
TUBB6-201ENST00000317702 CD164L2Q6UWJ8 174 aa19.51■□□□□ 0.71
TUBB6-201ENST00000317702 Q8N3U1 123 aa19.51■□□□□ 0.71
TUBB6-201ENST00000317702 PKD1L1Q8TDX9 2849 aa19.51■□□□□ 0.71
TUBB6-201ENST00000317702 REG3AQ06141 175 aa19.49■□□□□ 0.71
TUBB6-201ENST00000317702 RPL28P46779 137 aaKnown RBP19.48■□□□□ 0.71
TUBB6-201ENST00000317702 XGP55808 180 aa19.48■□□□□ 0.71
TUBB6-201ENST00000317702 CHCHD10Q8WYQ3 142 aaPredicted RBP19.48■□□□□ 0.71
TUBB6-201ENST00000317702 ANK2Q01484 3957 aa19.45■□□□□ 0.7
TUBB6-201ENST00000317702 TRACP01848 142 aa19.45■□□□□ 0.7
TUBB6-201ENST00000317702 MT-ATP8P03928 68 aa19.45■□□□□ 0.7
TUBB6-201ENST00000317702 LELP1Q5T871 98 aa19.45■□□□□ 0.7
TUBB6-201ENST00000317702 IGLV10-54A0A075B6I4 117 aa19.44■□□□□ 0.7
TUBB6-201ENST00000317702 CKS1BP61024 79 aa19.44■□□□□ 0.7
TUBB6-201ENST00000317702 KIAA0087Q14695 138 aa19.42■□□□□ 0.7
TUBB6-201ENST00000317702 FAM218AQ96MZ4 157 aa19.42■□□□□ 0.7
TUBB6-201ENST00000317702 COL6A5A8TX70 2615 aa19.41■□□□□ 0.7
TUBB6-201ENST00000317702 TRAV8-4A0A0B4J246 113 aa19.41■□□□□ 0.7
TUBB6-201ENST00000317702 Q6ZTC4 211 aa19.4■□□□□ 0.7
TUBB6-201ENST00000317702 PRB2P02812 416 aaPredicted RBP19.4■□□□□ 0.7
TUBB6-201ENST00000317702 MALP21145 153 aa19.4■□□□□ 0.7
TUBB6-201ENST00000317702 CFAP161Q6P656 301 aa19.4■□□□□ 0.7
TUBB6-201ENST00000317702 CXCL5P42830 114 aa19.39■□□□□ 0.69
TUBB6-201ENST00000317702 DEFB121Q5J5C9 76 aa19.39■□□□□ 0.69
TUBB6-201ENST00000317702 SMIM11BQ8TCY0 68 aa19.39■□□□□ 0.69
TUBB6-201ENST00000317702 A0A0J9YWU9 116 aa19.39■□□□□ 0.69
TUBB6-201ENST00000317702 LYPD5Q6UWN5 251 aa19.35■□□□□ 0.69
TUBB6-201ENST00000317702 COX17Q14061 63 aa19.34■□□□□ 0.69
TUBB6-201ENST00000317702 KPRPQ5T749 579 aaPredicted RBP19.33■□□□□ 0.69
TUBB6-201ENST00000317702 H3BNG1 76 aa19.32■□□□□ 0.68
TUBB6-201ENST00000317702 OR13C6PQ8NH95 151 aa19.32■□□□□ 0.68
TUBB6-201ENST00000317702 BAALC-AS2P0C853 105 aa19.32■□□□□ 0.68
TUBB6-201ENST00000317702 NANOS2P60321 138 aaKnown RBP19.32■□□□□ 0.68
TUBB6-201ENST00000317702 PRR34Q9NV39 138 aa19.31■□□□□ 0.68
TUBB6-201ENST00000317702 H0YGX0 51 aa19.3■□□□□ 0.68
TUBB6-201ENST00000317702 KLK12Q9UKR0 248 aa19.3■□□□□ 0.68
TUBB6-201ENST00000317702 K7EIL1 84 aa19.29■□□□□ 0.68
TUBB6-201ENST00000317702 KLK5Q9Y337 293 aaPredicted RBP19.29■□□□□ 0.68
TUBB6-201ENST00000317702 FAM240AA0A1B0GVK7 77 aa19.28■□□□□ 0.68
TUBB6-201ENST00000317702 C11orf45Q8TAV5 145 aa19.28■□□□□ 0.68
TUBB6-201ENST00000317702 Q9HAA7 133 aa19.28■□□□□ 0.68
TUBB6-201ENST00000317702 TENM3Q9P273 2699 aa19.27■□□□□ 0.68
TUBB6-201ENST00000317702 A0A087WYN8 130 aa19.26■□□□□ 0.67
TUBB6-201ENST00000317702 C9orf116Q5BN46 136 aaPredicted RBP19.25■□□□□ 0.67
TUBB6-201ENST00000317702 ENHOQ6UWT2 76 aa19.25■□□□□ 0.67
TUBB6-201ENST00000317702 C22orf24Q9Y442 160 aa19.25■□□□□ 0.67
TUBB6-201ENST00000317702 NDUFC2O95298 119 aa19.24■□□□□ 0.67
TUBB6-201ENST00000317702 SPAG11BQ08648 103 aa19.24■□□□□ 0.67
TUBB6-201ENST00000317702 SNCGO76070 127 aa19.23■□□□□ 0.67
TUBB6-201ENST00000317702 DNAL4O96015 105 aa19.23■□□□□ 0.67
TUBB6-201ENST00000317702 MDFIQ99750 246 aa19.23■□□□□ 0.67
TUBB6-201ENST00000317702 NOTCH1P46531 2555 aa19.23■□□□□ 0.67
TUBB6-201ENST00000317702 DEFB131BA0A096LNP1 70 aa19.23■□□□□ 0.67
TUBB6-201ENST00000317702 TM2D3Q9BRN9 247 aa19.22■□□□□ 0.67
TUBB6-201ENST00000317702 WFDC10BQ8IUB3 73 aa19.21■□□□□ 0.67
TUBB6-201ENST00000317702 C6orf223Q8N319 242 aa19.2■□□□□ 0.66
TUBB6-201ENST00000317702 PRR3P79522 188 aaKnown RBP19.2■□□□□ 0.66
TUBB6-201ENST00000317702 MRAPQ8TCY5 172 aa19.2■□□□□ 0.66
TUBB6-201ENST00000317702 UNQ6190/PRO20217Q6UXQ8 127 aa19.19■□□□□ 0.66
TUBB6-201ENST00000317702 C15orf53Q8NAA6 179 aa19.19■□□□□ 0.66
TUBB6-201ENST00000317702 C10orf25Q5T742 122 aa19.18■□□□□ 0.66
TUBB6-201ENST00000317702 ESRGQ1W209 222 aa19.17■□□□□ 0.66
TUBB6-201ENST00000317702 LECT2O14960 151 aa19.16■□□□□ 0.66
TUBB6-201ENST00000317702 LINC00526Q96FQ7 95 aa19.16■□□□□ 0.66
TUBB6-201ENST00000317702 A0A1B0GV72 72 aa19.15■□□□□ 0.66
TUBB6-201ENST00000317702 MUC7Q8TAX7 377 aa19.15■□□□□ 0.66
TUBB6-201ENST00000317702 ACYP1P07311 99 aa19.15■□□□□ 0.66
TUBB6-201ENST00000317702 TMEM126AQ9H061 195 aa19.14■□□□□ 0.65
TUBB6-201ENST00000317702 DNHD1Q96M86 4753 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms