RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 CFHR3Q02985 330 aa3.37□□□□□ -1.87
CNOT1-201ENST00000317147 IGLV4-69A0A075B6H9 119 aa3.37□□□□□ -1.87
CNOT1-201ENST00000317147 IGHV3-11P01762 117 aa3.37□□□□□ -1.87
CNOT1-201ENST00000317147 NHLRC4P0CG21 123 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-201ENST00000317147 GATA1P15976 413 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-201ENST00000317147 SPINK13Q1W4C9 94 aa3.37□□□□□ -1.87
CNOT1-201ENST00000317147 MSRB2Q9Y3D2 182 aa3.37□□□□□ -1.87
CNOT1-201ENST00000317147 ESRGQ1W209 222 aa3.37□□□□□ -1.87
CNOT1-201ENST00000317147 MIR7-3HGQ8N6C7 128 aa3.37□□□□□ -1.87
CNOT1-201ENST00000317147 C5orf56Q8N8D9 126 aa3.37□□□□□ -1.87
CNOT1-201ENST00000317147 PLAC8L1A1L4L8 177 aa3.37□□□□□ -1.87
CNOT1-201ENST00000317147 SHISA2Q6UWI4 295 aa3.37□□□□□ -1.87
CNOT1-201ENST00000317147 LY6LH3BQJ8 138 aa3.37□□□□□ -1.87
CNOT1-201ENST00000317147 CRIP1P50238 77 aa3.37□□□□□ -1.87
CNOT1-201ENST00000317147 CD164L2Q6UWJ8 174 aa3.37□□□□□ -1.87
CNOT1-201ENST00000317147 LYPD2Q6UXB3 125 aa3.37□□□□□ -1.87
CNOT1-201ENST00000317147 INSL3P51460 131 aa3.36□□□□□ -1.87
CNOT1-201ENST00000317147 APRG1Q8IVJ8 170 aa3.36□□□□□ -1.87
CNOT1-201ENST00000317147 IGLV5-45A0A087WSX0 123 aa3.36□□□□□ -1.87
CNOT1-201ENST00000317147 E7EQL1 145 aa3.36□□□□□ -1.87
CNOT1-201ENST00000317147 LY6HO94772 140 aa3.36□□□□□ -1.87
CNOT1-201ENST00000317147 ENHOQ6UWT2 76 aa3.36□□□□□ -1.87
CNOT1-201ENST00000317147 Q8IZM0 81 aa3.36□□□□□ -1.87
CNOT1-201ENST00000317147 TRBV6-4A0A1B0GX49 114 aa3.36□□□□□ -1.87
CNOT1-201ENST00000317147 TSHBP01222 138 aa3.36□□□□□ -1.87
CNOT1-201ENST00000317147 CRIP2P52943 208 aaPredicted RBP3.36□□□□□ -1.87
CNOT1-201ENST00000317147 KLKP1Q107X0 134 aa3.36□□□□□ -1.87
CNOT1-201ENST00000317147 LOC110117498A0A087WWA1 95 aa3.35□□□□□ -1.87
CNOT1-201ENST00000317147 LY6EQ16553 131 aa3.35□□□□□ -1.87
CNOT1-201ENST00000317147 PRYO14603 147 aa3.35□□□□□ -1.87
CNOT1-201ENST00000317147 GNRH2O43555 120 aa3.35□□□□□ -1.87
CNOT1-201ENST00000317147 MSMBP08118 114 aa3.35□□□□□ -1.87
CNOT1-201ENST00000317147 DCANP1Q8TF63 244 aa3.35□□□□□ -1.87
CNOT1-201ENST00000317147 CHCHD7Q9BUK0 85 aa3.35□□□□□ -1.87
CNOT1-201ENST00000317147 FAM215AQ9Y5M1 114 aa3.35□□□□□ -1.87
CNOT1-201ENST00000317147 PRR4Q16378 134 aa3.35□□□□□ -1.87
CNOT1-201ENST00000317147 hDV103S1A0JD37 113 aa3.35□□□□□ -1.87
CNOT1-201ENST00000317147 XCL1P47992 114 aa3.35□□□□□ -1.87
CNOT1-201ENST00000317147 XCL2Q9UBD3 114 aa3.35□□□□□ -1.87
CNOT1-201ENST00000317147 Q8N9W7 124 aa3.35□□□□□ -1.87
CNOT1-201ENST00000317147 HRCT1Q6UXD1 115 aa3.35□□□□□ -1.87
CNOT1-201ENST00000317147 Q8N6K4 173 aa3.34□□□□□ -1.87
CNOT1-201ENST00000317147 CTSZQ9UBR2 303 aa3.34□□□□□ -1.87
CNOT1-201ENST00000317147 SPRY2O43597 315 aa3.34□□□□□ -1.87
CNOT1-201ENST00000317147 DEFB131AP59861 70 aa3.34□□□□□ -1.87
CNOT1-201ENST00000317147 KLK9Q2XQG4 91 aa3.34□□□□□ -1.87
CNOT1-201ENST00000317147 SPAG11BQ08648 103 aa3.34□□□□□ -1.87
CNOT1-201ENST00000317147 CELA1Q9UNI1 258 aa3.34□□□□□ -1.87
CNOT1-201ENST00000317147 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.34□□□□□ -1.88
CNOT1-201ENST00000317147 IGHV3-73A0A0B4J1V6 119 aa3.34□□□□□ -1.88
CNOT1-201ENST00000317147 IGLV5-39A0A0G2JS06 123 aa3.34□□□□□ -1.88
CNOT1-201ENST00000317147 IGKV2-29A2NJV5 120 aaPredicted RBP3.34□□□□□ -1.88
CNOT1-201ENST00000317147 NTM-AS1Q6ZSK4 140 aa3.34□□□□□ -1.88
CNOT1-201ENST00000317147 Q6ZQT7 251 aa3.34□□□□□ -1.88
CNOT1-201ENST00000317147 C1orf229Q6ZS94 237 aaPredicted RBP3.34□□□□□ -1.88
CNOT1-201ENST00000317147 Q8N814 137 aa3.34□□□□□ -1.88
CNOT1-201ENST00000317147 C4orf3Q8WVX3 66 aa3.34□□□□□ -1.88
CNOT1-201ENST00000317147 CYP4F30PQ9H0H9 118 aa3.34□□□□□ -1.88
CNOT1-201ENST00000317147 CDKN2A-AS1Q9UH64 79 aa3.34□□□□□ -1.88
CNOT1-201ENST00000317147 SCXQ7RTU7 201 aa3.33□□□□□ -1.88
CNOT1-201ENST00000317147 RPL37AP8A6NKH3 93 aa3.33□□□□□ -1.88
CNOT1-201ENST00000317147 K7EQG2 157 aa3.33□□□□□ -1.88
CNOT1-201ENST00000317147 H0Y9J4 135 aa3.33□□□□□ -1.88
CNOT1-201ENST00000317147 RNASE3P12724 160 aaKnown RBP3.33□□□□□ -1.88
CNOT1-201ENST00000317147 HTN3P15516 51 aa3.33□□□□□ -1.88
CNOT1-201ENST00000317147 CD164Q04900 197 aa3.33□□□□□ -1.88
CNOT1-201ENST00000317147 PRO3102Q9H379 93 aa3.33□□□□□ -1.88
CNOT1-201ENST00000317147 DEFB112Q30KQ8 113 aa3.33□□□□□ -1.88
CNOT1-201ENST00000317147 LINC01560Q8TB33 94 aa3.33□□□□□ -1.88
CNOT1-201ENST00000317147 FAM30AQ9NZY2 134 aa3.32□□□□□ -1.88
CNOT1-201ENST00000317147 C8orf87E5RJ46 101 aa3.32□□□□□ -1.88
CNOT1-201ENST00000317147 G3V318 75 aa3.32□□□□□ -1.88
CNOT1-201ENST00000317147 C14orf177Q52M58 125 aa3.32□□□□□ -1.88
CNOT1-201ENST00000317147 A0A1B0GUV1 79 aa3.32□□□□□ -1.88
CNOT1-201ENST00000317147 PRAC2D3DTV9 90 aa3.32□□□□□ -1.88
CNOT1-201ENST00000317147 ANGP03950 147 aaKnown RBP3.32□□□□□ -1.88
CNOT1-201ENST00000317147 WFDC10AQ9H1F0 79 aa3.32□□□□□ -1.88
CNOT1-201ENST00000317147 SMCPP49901 116 aaPredicted RBP3.31□□□□□ -1.88
CNOT1-201ENST00000317147 SPAG11AQ6PDA7 123 aa3.31□□□□□ -1.88
CNOT1-201ENST00000317147 PLA2G2CQ5R387 149 aa3.31□□□□□ -1.88
CNOT1-201ENST00000317147 SIRPDQ9H106 197 aa3.31□□□□□ -1.88
CNOT1-201ENST00000317147 GAS8-AS1O95177 125 aa3.31□□□□□ -1.88
CNOT1-201ENST00000317147 MSMPQ1L6U9 139 aa3.31□□□□□ -1.88
CNOT1-201ENST00000317147 B9D2Q9BPU9 175 aa3.31□□□□□ -1.88
CNOT1-201ENST00000317147 PRO0255Q9UI72 69 aa3.31□□□□□ -1.88
CNOT1-201ENST00000317147 ELOF1P60002 83 aaKnown RBP3.31□□□□□ -1.88
CNOT1-201ENST00000317147 BEAN1Q3B7T3 259 aa3.31□□□□□ -1.88
CNOT1-201ENST00000317147 Q6ZS46 218 aa3.31□□□□□ -1.88
CNOT1-201ENST00000317147 RETNLBQ9BQ08 111 aa3.31□□□□□ -1.88
CNOT1-201ENST00000317147 TP53AIP1Q9HCN2 124 aa3.31□□□□□ -1.88
CNOT1-201ENST00000317147 SMIM1B2RUZ4 78 aa3.3□□□□□ -1.88
CNOT1-201ENST00000317147 HCG22E2RYF7 251 aa3.3□□□□□ -1.88
CNOT1-201ENST00000317147 RNASE13Q5GAN3 156 aaKnown RBP3.3□□□□□ -1.88
CNOT1-201ENST00000317147 CAMK2N2Q96S95 79 aa3.3□□□□□ -1.88
CNOT1-201ENST00000317147 M0R378 163 aa3.3□□□□□ -1.88
CNOT1-201ENST00000317147 NCR3O14931 201 aa3.3□□□□□ -1.88
CNOT1-201ENST00000317147 ZNF73O43830 326 aaPredicted RBP3.3□□□□□ -1.88
CNOT1-201ENST00000317147 IGHV4-59P01825 116 aa3.3□□□□□ -1.88
CNOT1-201ENST00000317147 Q8N3U1 123 aa3.3□□□□□ -1.88
CNOT1-201ENST00000317147 Q9HAA7 133 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 191.9 ms