RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 LINC01546A6NGU7 62 aa9.08□□□□□ -0.96
SH3PXD2A-201ENST00000315994 USP9XQ93008 2570 aaPredicted RBP9.08□□□□□ -0.96
SH3PXD2A-201ENST00000315994 Q6ZQY7 126 aa9.07□□□□□ -0.96
SH3PXD2A-201ENST00000315994 ABCA12Q86UK0 2595 aa9.07□□□□□ -0.96
SH3PXD2A-201ENST00000315994 RPL28P46779 137 aaKnown RBP9.06□□□□□ -0.96
SH3PXD2A-201ENST00000315994 LINC01561Q8N1V8 128 aa9.06□□□□□ -0.96
SH3PXD2A-201ENST00000315994 F8WDY8 70 aa9.06□□□□□ -0.96
SH3PXD2A-201ENST00000315994 ATP5EP2Q5VTU8 51 aa9.06□□□□□ -0.96
SH3PXD2A-201ENST00000315994 PPDPFQ9H3Y8 114 aa9.06□□□□□ -0.96
SH3PXD2A-201ENST00000315994 C20orf197Q8N268 126 aa9.06□□□□□ -0.96
SH3PXD2A-201ENST00000315994 SERP2Q8N6R1 65 aa9.06□□□□□ -0.96
SH3PXD2A-201ENST00000315994 LINC00315P59091 139 aa9.05□□□□□ -0.96
SH3PXD2A-201ENST00000315994 RPL37AP8A6NKH3 93 aa9.05□□□□□ -0.96
SH3PXD2A-201ENST00000315994 FAM240AA0A1B0GVK7 77 aa9.04□□□□□ -0.96
SH3PXD2A-201ENST00000315994 HRCT1Q6UXD1 115 aa9.04□□□□□ -0.96
SH3PXD2A-201ENST00000315994 WFDC10BQ8IUB3 73 aa9.04□□□□□ -0.96
SH3PXD2A-201ENST00000315994 C2CD3Q4AC94 2353 aa9.04□□□□□ -0.96
SH3PXD2A-201ENST00000315994 A0A0U1RQV1 116 aa9.04□□□□□ -0.96
SH3PXD2A-201ENST00000315994 C9orf116Q5BN46 136 aaPredicted RBP9.04□□□□□ -0.96
SH3PXD2A-201ENST00000315994 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.04□□□□□ -0.96
SH3PXD2A-201ENST00000315994 CELA1Q9UNI1 258 aa9.04□□□□□ -0.96
SH3PXD2A-201ENST00000315994 CCKP06307 115 aa9.03□□□□□ -0.96
SH3PXD2A-201ENST00000315994 SPINK6Q6UWN8 80 aa9.03□□□□□ -0.96
SH3PXD2A-201ENST00000315994 USP17L23D6RBM5 183 aa9.03□□□□□ -0.96
SH3PXD2A-201ENST00000315994 TLN2Q9Y4G6 2542 aa9.02□□□□□ -0.97
SH3PXD2A-201ENST00000315994 USP9YO00507 2555 aaPredicted RBP9.02□□□□□ -0.97
SH3PXD2A-201ENST00000315994 ADAMTSL4-AS1Q5T5F5 129 aa9.02□□□□□ -0.97
SH3PXD2A-201ENST00000315994 C2orf48Q96LS8 159 aa9.02□□□□□ -0.97
SH3PXD2A-201ENST00000315994 DOPEY1Q5JWR5 2465 aa9.02□□□□□ -0.97
SH3PXD2A-201ENST00000315994 IGLV9-49A0A0B4J1Y8 123 aa9.02□□□□□ -0.97
SH3PXD2A-201ENST00000315994 KRTAP24-1Q3LI83 254 aa9.02□□□□□ -0.97
SH3PXD2A-201ENST00000315994 CEP350Q5VT06 3117 aa9.01□□□□□ -0.97
SH3PXD2A-201ENST00000315994 NDUFC2-KCTD14E9PQ53 114 aa9.01□□□□□ -0.97
SH3PXD2A-201ENST00000315994 PKD1L2Q7Z442 2459 aa9.01□□□□□ -0.97
SH3PXD2A-201ENST00000315994 JMJD1CQ15652 2540 aa9□□□□□ -0.97
SH3PXD2A-201ENST00000315994 A0A096LNT2 108 aa9□□□□□ -0.97
SH3PXD2A-201ENST00000315994 C6orf223Q8N319 242 aa8.99□□□□□ -0.97
SH3PXD2A-201ENST00000315994 TRBV10-3A0A0K0K1G6 114 aa8.99□□□□□ -0.97
SH3PXD2A-201ENST00000315994 LRRK2Q5S007 2527 aa8.99□□□□□ -0.97
SH3PXD2A-201ENST00000315994 X6R8D5 127 aa8.99□□□□□ -0.97
SH3PXD2A-201ENST00000315994 C1orf195Q5TG92 126 aa8.98□□□□□ -0.97
SH3PXD2A-201ENST00000315994 ENHOQ6UWT2 76 aa8.98□□□□□ -0.97
SH3PXD2A-201ENST00000315994 NTM-AS1Q6ZSK4 140 aa8.97□□□□□ -0.97
SH3PXD2A-201ENST00000315994 SCXQ7RTU7 201 aa8.97□□□□□ -0.97
SH3PXD2A-201ENST00000315994 MPLKIPQ8TAP9 179 aa8.97□□□□□ -0.97
SH3PXD2A-201ENST00000315994 AGRNO00468 2067 aa8.97□□□□□ -0.97
SH3PXD2A-201ENST00000315994 C3orf84H3BNL1 204 aa8.96□□□□□ -0.97
SH3PXD2A-201ENST00000315994 Q8N814 137 aa8.96□□□□□ -0.97
SH3PXD2A-201ENST00000315994 C10orf25Q5T742 122 aa8.96□□□□□ -0.98
SH3PXD2A-201ENST00000315994 REG3GQ6UW15 175 aa8.96□□□□□ -0.98
SH3PXD2A-201ENST00000315994 ZFYVE26Q68DK2 2539 aa8.95□□□□□ -0.98
SH3PXD2A-201ENST00000315994 H3BNG1 76 aa8.95□□□□□ -0.98
SH3PXD2A-201ENST00000315994 PRO0461Q9UI25 63 aa8.95□□□□□ -0.98
SH3PXD2A-201ENST00000315994 IGLV5-39A0A0G2JS06 123 aa8.95□□□□□ -0.98
SH3PXD2A-201ENST00000315994 PRR3P79522 188 aaKnown RBP8.95□□□□□ -0.98
SH3PXD2A-201ENST00000315994 LINC01556Q5JQF7 62 aa8.94□□□□□ -0.98
SH3PXD2A-201ENST00000315994 CHD7Q9P2D1 2997 aa8.94□□□□□ -0.98
SH3PXD2A-201ENST00000315994 ANKRD17O75179 2603 aaKnown RBP8.94□□□□□ -0.98
SH3PXD2A-201ENST00000315994 C1orf137Q5JT78 98 aa8.93□□□□□ -0.98
SH3PXD2A-201ENST00000315994 SMCPP49901 116 aaPredicted RBP8.93□□□□□ -0.98
SH3PXD2A-201ENST00000315994 MRPL55Q7Z7F7 128 aaKnown RBP8.93□□□□□ -0.98
SH3PXD2A-201ENST00000315994 FN1P02751 2386 aaKnown RBP8.93□□□□□ -0.98
SH3PXD2A-201ENST00000315994 IGHV3OR16-9A0A0B4J2B5 98 aa8.92□□□□□ -0.98
SH3PXD2A-201ENST00000315994 Q6ZRU5 148 aa8.92□□□□□ -0.98
SH3PXD2A-201ENST00000315994 A0A087WYN8 130 aa8.92□□□□□ -0.98
SH3PXD2A-201ENST00000315994 ATP5EP56381 51 aaPredicted RBP8.92□□□□□ -0.98
SH3PXD2A-201ENST00000315994 MDFIQ99750 246 aa8.92□□□□□ -0.98
SH3PXD2A-201ENST00000315994 ESRGQ1W209 222 aa8.91□□□□□ -0.98
SH3PXD2A-201ENST00000315994 Q6JHZ5 121 aa8.91□□□□□ -0.98
SH3PXD2A-201ENST00000315994 SMIM26A0A096LP01 95 aa8.91□□□□□ -0.98
SH3PXD2A-201ENST00000315994 CIRBP-AS1Q8TBR5 109 aa8.91□□□□□ -0.98
SH3PXD2A-201ENST00000315994 TRBV7-7A0A0K0K1E9 115 aa8.91□□□□□ -0.98
SH3PXD2A-201ENST00000315994 SBSPONQ8IVN8 264 aa8.91□□□□□ -0.98
SH3PXD2A-201ENST00000315994 PRYO14603 147 aa8.9□□□□□ -0.98
SH3PXD2A-201ENST00000315994 IGLV5-45A0A087WSX0 123 aa8.9□□□□□ -0.98
SH3PXD2A-201ENST00000315994 SERP1Q9Y6X1 66 aa8.9□□□□□ -0.98
SH3PXD2A-201ENST00000315994 HTTP42858 3142 aa8.9□□□□□ -0.99
SH3PXD2A-201ENST00000315994 NDUFC1O43677 76 aa8.9□□□□□ -0.99
SH3PXD2A-201ENST00000315994 Q8NAQ8 132 aa8.9□□□□□ -0.99
SH3PXD2A-201ENST00000315994 K7ERS5 55 aa8.88□□□□□ -0.99
SH3PXD2A-201ENST00000315994 POLQO75417 2590 aa8.87□□□□□ -0.99
SH3PXD2A-201ENST00000315994 Q9UF83 564 aa8.87□□□□□ -0.99
SH3PXD2A-201ENST00000315994 A8MTW9 85 aa8.87□□□□□ -0.99
SH3PXD2A-201ENST00000315994 SNURFQ9Y675 71 aa8.86□□□□□ -0.99
SH3PXD2A-201ENST00000315994 CHD9Q3L8U1 2897 aa8.86□□□□□ -0.99
SH3PXD2A-201ENST00000315994 LINC00337Q8N6G1 96 aa8.86□□□□□ -0.99
SH3PXD2A-201ENST00000315994 WWC2-AS2Q96NR7 200 aa8.85□□□□□ -0.99
SH3PXD2A-201ENST00000315994 FAM229AH3BQW9 127 aa8.85□□□□□ -0.99
SH3PXD2A-201ENST00000315994 RPS28P62857 69 aaKnown RBP8.85□□□□□ -0.99
SH3PXD2A-201ENST00000315994 LINC00575Q6W349 94 aa8.84□□□□□ -0.99
SH3PXD2A-201ENST00000315994 SETD2Q9BYW2 2564 aaPredicted RBP8.84□□□□□ -0.99
SH3PXD2A-201ENST00000315994 PRO0628Q9UI54 55 aa8.84□□□□□ -0.99
SH3PXD2A-201ENST00000315994 KRTAP1-3Q8IUG1 177 aa8.83□□□□□ -1
SH3PXD2A-201ENST00000315994 A0A087WVE0 104 aa8.83□□□□□ -1
SH3PXD2A-201ENST00000315994 LIMD2Q9BT23 127 aa8.83□□□□□ -1
SH3PXD2A-201ENST00000315994 WFDC13Q8IUB5 93 aa8.82□□□□□ -1
SH3PXD2A-201ENST00000315994 SPTSSBQ8NFR3 76 aa8.82□□□□□ -1
SH3PXD2A-201ENST00000315994 CSNK1G2-AS1Q8NCQ2 148 aa8.82□□□□□ -1
SH3PXD2A-201ENST00000315994 MTORP42345 2549 aa8.82□□□□□ -1
SH3PXD2A-201ENST00000315994 CRYGAP11844 174 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms