RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SPANXDQ9BXN6 97 aa9.63□□□□□ -0.87
DDX54-202ENST00000314045 TRBV10-2A0A0K0K1G8 114 aa9.63□□□□□ -0.87
DDX54-202ENST00000314045 A0A1B0GUV1 79 aa9.63□□□□□ -0.87
DDX54-202ENST00000314045 TSPEAR-AS2P59090 65 aa9.63□□□□□ -0.87
DDX54-202ENST00000314045 LYPD5Q6UWN5 251 aa9.63□□□□□ -0.87
DDX54-202ENST00000314045 CYSRT1A8MQ03 144 aa9.62□□□□□ -0.87
DDX54-202ENST00000314045 NTM-AS1Q6ZSK4 140 aa9.62□□□□□ -0.87
DDX54-202ENST00000314045 ZZEF1O43149 2961 aa9.62□□□□□ -0.87
DDX54-202ENST00000314045 H3BT86 120 aa9.62□□□□□ -0.87
DDX54-202ENST00000314045 WFDC10BQ8IUB3 73 aa9.61□□□□□ -0.87
DDX54-202ENST00000314045 ANAPC13Q9BS18 74 aa9.61□□□□□ -0.87
DDX54-202ENST00000314045 COX7BP24311 80 aa9.61□□□□□ -0.87
DDX54-202ENST00000314045 UNQ6190/PRO20217Q6UXQ8 127 aa9.61□□□□□ -0.87
DDX54-202ENST00000314045 BAHCC1Q9P281 2608 aa9.61□□□□□ -0.87
DDX54-202ENST00000314045 CDK2AP2O75956 126 aa9.61□□□□□ -0.87
DDX54-202ENST00000314045 UBE2AP49459 152 aa9.61□□□□□ -0.87
DDX54-202ENST00000314045 KRTAP10-3P60369 221 aa9.61□□□□□ -0.87
DDX54-202ENST00000314045 A8MTW9 85 aa9.6□□□□□ -0.87
DDX54-202ENST00000314045 LINC01546A6NGU7 62 aa9.6□□□□□ -0.87
DDX54-202ENST00000314045 TRIAP1O43715 76 aa9.6□□□□□ -0.87
DDX54-202ENST00000314045 NUPR2A6NF83 97 aa9.59□□□□□ -0.87
DDX54-202ENST00000314045 SBSPONQ8IVN8 264 aa9.58□□□□□ -0.88
DDX54-202ENST00000314045 C6orf99Q4VX62 202 aa9.58□□□□□ -0.88
DDX54-202ENST00000314045 LY6G6CO95867 125 aa9.57□□□□□ -0.88
DDX54-202ENST00000314045 TRBV30A0A0K0K1B3 111 aa9.57□□□□□ -0.88
DDX54-202ENST00000314045 FAM19A5Q7Z5A7 132 aaPredicted RBP9.56□□□□□ -0.88
DDX54-202ENST00000314045 C9orf116Q5BN46 136 aaPredicted RBP9.56□□□□□ -0.88
DDX54-202ENST00000314045 KALRNO60229 2985 aa9.56□□□□□ -0.88
DDX54-202ENST00000314045 UBR5O95071 2799 aaPredicted RBP9.56□□□□□ -0.88
DDX54-202ENST00000314045 Q8NAQ8 132 aa9.56□□□□□ -0.88
DDX54-202ENST00000314045 HIGD2AQ9BW72 106 aa9.56□□□□□ -0.88
DDX54-202ENST00000314045 CR1P17927 2039 aa9.56□□□□□ -0.88
DDX54-202ENST00000314045 JMJD7-PLA2G4BH0Y9G9 81 aa9.55□□□□□ -0.88
DDX54-202ENST00000314045 COX17Q14061 63 aa9.55□□□□□ -0.88
DDX54-202ENST00000314045 C19orf73Q9NVV2 129 aa9.55□□□□□ -0.88
DDX54-202ENST00000314045 hADV29S1A0JD25 119 aa9.55□□□□□ -0.88
DDX54-202ENST00000314045 TMEM256-PLSCR3K7ERE1 68 aa9.55□□□□□ -0.88
DDX54-202ENST00000314045 FOXI1Q12951 378 aa9.55□□□□□ -0.88
DDX54-202ENST00000314045 TACC2O95359 2948 aa9.55□□□□□ -0.88
DDX54-202ENST00000314045 ITPR2Q14571 2701 aa9.54□□□□□ -0.88
DDX54-202ENST00000314045 MYO15AQ9UKN7 3530 aa9.54□□□□□ -0.88
DDX54-202ENST00000314045 FUSP35637 526 aaKnown RBP eCLIP9.54□□□□□ -0.88
DDX54-202ENST00000314045 H3BQ85 93 aa9.54□□□□□ -0.88
DDX54-202ENST00000314045 NOTCH1P46531 2555 aa9.54□□□□□ -0.88
DDX54-202ENST00000314045 NHLRC4P0CG21 123 aaPredicted RBP9.54□□□□□ -0.88
DDX54-202ENST00000314045 ADAMTSL4-AS1Q5T5F5 129 aa9.54□□□□□ -0.88
DDX54-202ENST00000314045 CSNK1G2-AS1Q8NCQ2 148 aa9.54□□□□□ -0.88
DDX54-202ENST00000314045 ACYP1P07311 99 aa9.53□□□□□ -0.88
DDX54-202ENST00000314045 RBM3P98179 157 aaKnown RBP9.53□□□□□ -0.88
DDX54-202ENST00000314045 EGFEM1PQ0D2K5 195 aa9.53□□□□□ -0.88
DDX54-202ENST00000314045 SLPIP03973 132 aa9.52□□□□□ -0.89
DDX54-202ENST00000314045 MUC7Q8TAX7 377 aa9.52□□□□□ -0.89
DDX54-202ENST00000314045 IGKV2-28A0A075B6P5 120 aa9.52□□□□□ -0.89
DDX54-202ENST00000314045 IGHV3OR16-9A0A0B4J2B5 98 aa9.52□□□□□ -0.89
DDX54-202ENST00000314045 IGKV2D-28P01615 120 aa9.52□□□□□ -0.89
DDX54-202ENST00000314045 ESRGQ1W209 222 aa9.52□□□□□ -0.89
DDX54-202ENST00000314045 GIG44P09565 113 aaPredicted RBP9.51□□□□□ -0.89
DDX54-202ENST00000314045 USP17L23D6RBM5 183 aa9.51□□□□□ -0.89
DDX54-202ENST00000314045 M0R378 163 aa9.51□□□□□ -0.89
DDX54-202ENST00000314045 TRACP01848 142 aa9.51□□□□□ -0.89
DDX54-202ENST00000314045 SMIM11BQ8TCY0 68 aa9.51□□□□□ -0.89
DDX54-202ENST00000314045 TRAV23DV6A0A075B6W5 121 aa9.5□□□□□ -0.89
DDX54-202ENST00000314045 LOC107984640A0A0U1RRK4 108 aa9.5□□□□□ -0.89
DDX54-202ENST00000314045 FAM19A1Q7Z5A9 133 aa9.5□□□□□ -0.89
DDX54-202ENST00000314045 C6orf223Q8N319 242 aa9.5□□□□□ -0.89
DDX54-202ENST00000314045 LOC400499M0QZD8 3231 aa9.49□□□□□ -0.89
DDX54-202ENST00000314045 ITPR1Q14643 2758 aa9.49□□□□□ -0.89
DDX54-202ENST00000314045 C14orf132Q9NPU4 83 aa9.49□□□□□ -0.89
DDX54-202ENST00000314045 IGLV5-39A0A0G2JS06 123 aa9.48□□□□□ -0.89
DDX54-202ENST00000314045 LRBAP50851 2863 aa9.47□□□□□ -0.89
DDX54-202ENST00000314045 TEX49A0A1B0GTD5 131 aa9.47□□□□□ -0.89
DDX54-202ENST00000314045 H3BNG1 76 aa9.47□□□□□ -0.89
DDX54-202ENST00000314045 B9D2Q9BPU9 175 aa9.47□□□□□ -0.89
DDX54-202ENST00000314045 PRR3P79522 188 aaKnown RBP9.47□□□□□ -0.89
DDX54-202ENST00000314045 LST1O00453 97 aa9.47□□□□□ -0.89
DDX54-202ENST00000314045 KRTAP10-11P60412 298 aa9.47□□□□□ -0.89
DDX54-202ENST00000314045 SS18L2Q9UHA2 77 aa9.46□□□□□ -0.89
DDX54-202ENST00000314045 LINC01561Q8N1V8 128 aa9.46□□□□□ -0.9
DDX54-202ENST00000314045 LINC01556Q5JQF7 62 aa9.46□□□□□ -0.9
DDX54-202ENST00000314045 Q6ZQY7 126 aa9.45□□□□□ -0.9
DDX54-202ENST00000314045 RPL37AP8A6NKH3 93 aa9.45□□□□□ -0.9
DDX54-202ENST00000314045 NREPQ16612 68 aa9.45□□□□□ -0.9
DDX54-202ENST00000314045 IGKV3D-7A0A0C4DH55 119 aa9.44□□□□□ -0.9
DDX54-202ENST00000314045 PDE6GP18545 87 aa9.44□□□□□ -0.9
DDX54-202ENST00000314045 USP34Q70CQ2 3546 aa9.44□□□□□ -0.9
DDX54-202ENST00000314045 ZNF73O43830 326 aaPredicted RBP9.44□□□□□ -0.9
DDX54-202ENST00000314045 Q8N3U1 123 aa9.44□□□□□ -0.9
DDX54-202ENST00000314045 IGLV5-45A0A087WSX0 123 aa9.43□□□□□ -0.9
DDX54-202ENST00000314045 B5MCH6 92 aa9.43□□□□□ -0.9
DDX54-202ENST00000314045 C2orf48Q96LS8 159 aa9.43□□□□□ -0.9
DDX54-202ENST00000314045 A0A096LNI7 61 aa9.43□□□□□ -0.9
DDX54-202ENST00000314045 NDUFC2-KCTD14E9PQ53 114 aa9.43□□□□□ -0.9
DDX54-202ENST00000314045 UTP20O75691 2785 aaKnown RBP9.42□□□□□ -0.9
DDX54-202ENST00000314045 PLAC8L1A1L4L8 177 aa9.42□□□□□ -0.9
DDX54-202ENST00000314045 K7EIL1 84 aa9.42□□□□□ -0.9
DDX54-202ENST00000314045 Q6ZRU5 148 aa9.42□□□□□ -0.9
DDX54-202ENST00000314045 TRBV10-3A0A0K0K1G6 114 aa9.41□□□□□ -0.9
DDX54-202ENST00000314045 CFAP47Q6ZTR5 3102 aa9.4□□□□□ -0.9
DDX54-202ENST00000314045 C9orf153Q5TBE3 101 aa9.4□□□□□ -0.9
DDX54-202ENST00000314045 RPL28P46779 137 aaKnown RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms