RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 ACANP16112 2415 aa12.23□□□□□ -0.45
GABRB3-202ENST00000311550 RETNQ9HD89 108 aa12.22□□□□□ -0.45
GABRB3-202ENST00000311550 NANOS2P60321 138 aaKnown RBP12.22□□□□□ -0.45
GABRB3-202ENST00000311550 A0A087WVE0 104 aa12.21□□□□□ -0.45
GABRB3-202ENST00000311550 FAM236DA0A1B0GTK5 79 aa12.21□□□□□ -0.45
GABRB3-202ENST00000311550 FAM236CP0DP71 79 aa12.21□□□□□ -0.45
GABRB3-202ENST00000311550 ANKRD17O75179 2603 aaKnown RBP12.21□□□□□ -0.45
GABRB3-202ENST00000311550 COX7CP15954 63 aa12.21□□□□□ -0.46
GABRB3-202ENST00000311550 Q6Q795 121 aa12.2□□□□□ -0.46
GABRB3-202ENST00000311550 SNURFQ9Y675 71 aa12.2□□□□□ -0.46
GABRB3-202ENST00000311550 KLK5Q9Y337 293 aaPredicted RBP12.2□□□□□ -0.46
GABRB3-202ENST00000311550 B9D2Q9BPU9 175 aa12.2□□□□□ -0.46
GABRB3-202ENST00000311550 Q8N814 137 aa12.2□□□□□ -0.46
GABRB3-202ENST00000311550 SHISA2Q6UWI4 295 aa12.19□□□□□ -0.46
GABRB3-202ENST00000311550 CDIP1Q9H305 208 aa12.19□□□□□ -0.46
GABRB3-202ENST00000311550 SMCPP49901 116 aaPredicted RBP12.19□□□□□ -0.46
GABRB3-202ENST00000311550 A0A0J9YWU9 116 aa12.19□□□□□ -0.46
GABRB3-202ENST00000311550 C6orf223Q8N319 242 aa12.19□□□□□ -0.46
GABRB3-202ENST00000311550 TRBV10-3A0A0K0K1G6 114 aa12.18□□□□□ -0.46
GABRB3-202ENST00000311550 Q6JHZ5 121 aa12.18□□□□□ -0.46
GABRB3-202ENST00000311550 TRAV10A0A0B4J240 114 aa12.18□□□□□ -0.46
GABRB3-202ENST00000311550 NTM-AS1Q6ZSK4 140 aa12.18□□□□□ -0.46
GABRB3-202ENST00000311550 LINC00337Q8N6G1 96 aa12.18□□□□□ -0.46
GABRB3-202ENST00000311550 UNC80Q8N2C7 3258 aa12.17□□□□□ -0.46
GABRB3-202ENST00000311550 C14orf177Q52M58 125 aa12.16□□□□□ -0.46
GABRB3-202ENST00000311550 C16orf95Q9H693 158 aa12.16□□□□□ -0.46
GABRB3-202ENST00000311550 PPDPFQ9H3Y8 114 aa12.15□□□□□ -0.46
GABRB3-202ENST00000311550 MPLKIPQ8TAP9 179 aa12.14□□□□□ -0.47
GABRB3-202ENST00000311550 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.14□□□□□ -0.47
GABRB3-202ENST00000311550 IGLV5-39A0A0G2JS06 123 aa12.14□□□□□ -0.47
GABRB3-202ENST00000311550 PRO0461Q9UI25 63 aa12.14□□□□□ -0.47
GABRB3-202ENST00000311550 A8MTW9 85 aa12.13□□□□□ -0.47
GABRB3-202ENST00000311550 Q8N2B8 174 aa12.13□□□□□ -0.47
GABRB3-202ENST00000311550 WFDC10BQ8IUB3 73 aa12.13□□□□□ -0.47
GABRB3-202ENST00000311550 Q6ZTC4 211 aa12.12□□□□□ -0.47
GABRB3-202ENST00000311550 CFAP54Q96N23 3096 aa12.12□□□□□ -0.47
GABRB3-202ENST00000311550 A0A1B0GUV1 79 aa12.11□□□□□ -0.47
GABRB3-202ENST00000311550 BRK1Q8WUW1 75 aa12.11□□□□□ -0.47
GABRB3-202ENST00000311550 DHRS4-AS1Q9P1J3 65 aa12.11□□□□□ -0.47
GABRB3-202ENST00000311550 MUC7Q8TAX7 377 aa12.1□□□□□ -0.47
GABRB3-202ENST00000311550 NDUFC2O95298 119 aa12.1□□□□□ -0.47
GABRB3-202ENST00000311550 EGFEM1PQ0D2K5 195 aa12.1□□□□□ -0.47
GABRB3-202ENST00000311550 TRANK1O15050 2925 aa12.09□□□□□ -0.47
GABRB3-202ENST00000311550 WFDC13Q8IUB5 93 aa12.08□□□□□ -0.48
GABRB3-202ENST00000311550 M0QXV9 152 aa12.08□□□□□ -0.48
GABRB3-202ENST00000311550 FASNP49327 2511 aaKnown RBP12.07□□□□□ -0.48
GABRB3-202ENST00000311550 IGHV3OR16-9A0A0B4J2B5 98 aa12.07□□□□□ -0.48
GABRB3-202ENST00000311550 CHKB-CPT1BH3BT56 60 aa12.07□□□□□ -0.48
GABRB3-202ENST00000311550 LINC00846Q9NV44 126 aa12.07□□□□□ -0.48
GABRB3-202ENST00000311550 PRUNE2Q8WUY3 3088 aa12.06□□□□□ -0.48
GABRB3-202ENST00000311550 FAM19A3Q7Z5A8 133 aa12.06□□□□□ -0.48
GABRB3-202ENST00000311550 EPG5Q9HCE0 2579 aa12.06□□□□□ -0.48
GABRB3-202ENST00000311550 SOSTDC1Q6X4U4 206 aa12.06□□□□□ -0.48
GABRB3-202ENST00000311550 IGKV4-1P06312 121 aa12.06□□□□□ -0.48
GABRB3-202ENST00000311550 MUC4Q99102 2169 aa12.06□□□□□ -0.48
GABRB3-202ENST00000311550 LOC107984640A0A0U1RRK4 108 aa12.05□□□□□ -0.48
GABRB3-202ENST00000311550 M0R2N4 97 aa12.05□□□□□ -0.48
GABRB3-202ENST00000311550 KLK9Q2XQG4 91 aa12.05□□□□□ -0.48
GABRB3-202ENST00000311550 PRR4Q16378 134 aa12.04□□□□□ -0.48
GABRB3-202ENST00000311550 LYPD5Q6UWN5 251 aa12.03□□□□□ -0.48
GABRB3-202ENST00000311550 CELA1Q9UNI1 258 aa12.03□□□□□ -0.48
GABRB3-202ENST00000311550 IGLV5-45A0A087WSX0 123 aa12.03□□□□□ -0.48
GABRB3-202ENST00000311550 FAM218AQ96MZ4 157 aa12.01□□□□□ -0.49
GABRB3-202ENST00000311550 FAM30AQ9NZY2 134 aa12.01□□□□□ -0.49
GABRB3-202ENST00000311550 LRCOL1A6NCL2 159 aa12.01□□□□□ -0.49
GABRB3-202ENST00000311550 LINC00575Q6W349 94 aa12□□□□□ -0.49
GABRB3-202ENST00000311550 FHL3Q13643 280 aa12□□□□□ -0.49
GABRB3-202ENST00000311550 NDUFC2-KCTD14E9PQ53 114 aa11.99□□□□□ -0.49
GABRB3-202ENST00000311550 HRCT1Q6UXD1 115 aa11.99□□□□□ -0.49
GABRB3-202ENST00000311550 C4orf48Q5BLP8 95 aa11.99□□□□□ -0.49
GABRB3-202ENST00000311550 Q6ZRU5 148 aa11.98□□□□□ -0.49
GABRB3-202ENST00000311550 C1orf137Q5JT78 98 aa11.98□□□□□ -0.49
GABRB3-202ENST00000311550 NDUFC1O43677 76 aa11.97□□□□□ -0.49
GABRB3-202ENST00000311550 Q8N3U1 123 aa11.97□□□□□ -0.49
GABRB3-202ENST00000311550 IL17DQ8TAD2 202 aa11.97□□□□□ -0.49
GABRB3-202ENST00000311550 TRAV7A0A075B6U4 112 aa11.96□□□□□ -0.49
GABRB3-202ENST00000311550 LINC01561Q8N1V8 128 aa11.95□□□□□ -0.5
GABRB3-202ENST00000311550 TRBV7-7A0A0K0K1E9 115 aa11.95□□□□□ -0.5
GABRB3-202ENST00000311550 PLAC8L1A1L4L8 177 aa11.94□□□□□ -0.5
GABRB3-202ENST00000311550 CDH23Q9H251 3354 aa11.94□□□□□ -0.5
GABRB3-202ENST00000311550 SPINK6Q6UWN8 80 aa11.94□□□□□ -0.5
GABRB3-202ENST00000311550 LITAFQ99732 161 aa11.94□□□□□ -0.5
GABRB3-202ENST00000311550 XIRP2A4UGR9 3374 aa11.94□□□□□ -0.5
GABRB3-202ENST00000311550 SBSPONQ8IVN8 264 aa11.94□□□□□ -0.5
GABRB3-202ENST00000311550 IGLV9-49A0A0B4J1Y8 123 aa11.94□□□□□ -0.5
GABRB3-202ENST00000311550 Q6ZVQ6 151 aa11.94□□□□□ -0.5
GABRB3-202ENST00000311550 A0A0U1RQV1 116 aa11.92□□□□□ -0.5
GABRB3-202ENST00000311550 X6R8D5 127 aa11.91□□□□□ -0.5
GABRB3-202ENST00000311550 C10orf25Q5T742 122 aa11.9□□□□□ -0.5
GABRB3-202ENST00000311550 REG3GQ6UW15 175 aa11.9□□□□□ -0.5
GABRB3-202ENST00000311550 C2orf48Q96LS8 159 aa11.9□□□□□ -0.51
GABRB3-202ENST00000311550 FSHBP01225 129 aa11.89□□□□□ -0.51
GABRB3-202ENST00000311550 ATP5EP56381 51 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-202ENST00000311550 LINC01547P58512 204 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-202ENST00000311550 SPTSSBQ8NFR3 76 aa11.89□□□□□ -0.51
GABRB3-202ENST00000311550 EIF4EBP3O60516 100 aaPredicted RBP11.87□□□□□ -0.51
GABRB3-202ENST00000311550 Q8N9L7 120 aa11.86□□□□□ -0.51
GABRB3-202ENST00000311550 TRIOO75962 3097 aa11.86□□□□□ -0.51
GABRB3-202ENST00000311550 C6orf48Q9UBA6 75 aa11.86□□□□□ -0.51
GABRB3-202ENST00000311550 MRPL55Q7Z7F7 128 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms