RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 STAB1Q9NY15 2570 aa8□□□□□ -1.13
PTPN2-201ENST00000309660 CKS1BP61024 79 aa8□□□□□ -1.13
PTPN2-201ENST00000309660 LINC00337Q8N6G1 96 aa8□□□□□ -1.13
PTPN2-201ENST00000309660 LYRM9A8MSI8 78 aa8□□□□□ -1.13
PTPN2-201ENST00000309660 CCL18P55774 89 aa8□□□□□ -1.13
PTPN2-201ENST00000309660 MALP21145 153 aa7.99□□□□□ -1.13
PTPN2-201ENST00000309660 LINC00612Q8N6U2 182 aa7.99□□□□□ -1.13
PTPN2-201ENST00000309660 H3BT86 120 aa7.99□□□□□ -1.13
PTPN2-201ENST00000309660 ATP5G1P05496 136 aa7.99□□□□□ -1.13
PTPN2-201ENST00000309660 IGHV4-30-4P0DP06 118 aa7.99□□□□□ -1.13
PTPN2-201ENST00000309660 MAST4O15021 2626 aa7.99□□□□□ -1.13
PTPN2-201ENST00000309660 OXLD1Q5BKU9 147 aa7.99□□□□□ -1.13
PTPN2-201ENST00000309660 TRAV13-2A0A0B4J235 113 aa7.98□□□□□ -1.13
PTPN2-201ENST00000309660 A0A1B0GV72 72 aa7.98□□□□□ -1.13
PTPN2-201ENST00000309660 LINC00526Q96FQ7 95 aa7.98□□□□□ -1.13
PTPN2-201ENST00000309660 FAM218AQ96MZ4 157 aa7.98□□□□□ -1.13
PTPN2-201ENST00000309660 IGKV2-28A0A075B6P5 120 aa7.98□□□□□ -1.13
PTPN2-201ENST00000309660 IGKV2D-28P01615 120 aa7.98□□□□□ -1.13
PTPN2-201ENST00000309660 REG3AQ06141 175 aa7.97□□□□□ -1.13
PTPN2-201ENST00000309660 SHISA2Q6UWI4 295 aa7.97□□□□□ -1.13
PTPN2-201ENST00000309660 CHCHD10Q8WYQ3 142 aaPredicted RBP7.97□□□□□ -1.13
PTPN2-201ENST00000309660 SNCGO76070 127 aa7.97□□□□□ -1.13
PTPN2-201ENST00000309660 SPART-AS1P0CW21 52 aa7.97□□□□□ -1.13
PTPN2-201ENST00000309660 CFAP161Q6P656 301 aa7.97□□□□□ -1.13
PTPN2-201ENST00000309660 CITED1Q99966 193 aa7.97□□□□□ -1.13
PTPN2-201ENST00000309660 IBA57-AS1B1ANH7 110 aa7.97□□□□□ -1.13
PTPN2-201ENST00000309660 PRR3P79522 188 aaKnown RBP7.97□□□□□ -1.13
PTPN2-201ENST00000309660 C9orf116Q5BN46 136 aaPredicted RBP7.96□□□□□ -1.13
PTPN2-201ENST00000309660 RETNQ9HD89 108 aa7.96□□□□□ -1.13
PTPN2-201ENST00000309660 A0A1B0GUV1 79 aa7.96□□□□□ -1.14
PTPN2-201ENST00000309660 BAALC-AS2P0C853 105 aa7.96□□□□□ -1.14
PTPN2-201ENST00000309660 TTC32Q5I0X7 151 aa7.96□□□□□ -1.14
PTPN2-201ENST00000309660 SMIM11BQ8TCY0 68 aa7.96□□□□□ -1.14
PTPN2-201ENST00000309660 NOTCH1P46531 2555 aa7.96□□□□□ -1.14
PTPN2-201ENST00000309660 Q8NAQ8 132 aa7.95□□□□□ -1.14
PTPN2-201ENST00000309660 KLK12Q9UKR0 248 aa7.95□□□□□ -1.14
PTPN2-201ENST00000309660 DNAL4O96015 105 aa7.95□□□□□ -1.14
PTPN2-201ENST00000309660 SCGB1A1P11684 91 aa7.95□□□□□ -1.14
PTPN2-201ENST00000309660 M0QXV9 152 aa7.95□□□□□ -1.14
PTPN2-201ENST00000309660 C15orf53Q8NAA6 179 aa7.94□□□□□ -1.14
PTPN2-201ENST00000309660 MIFP14174 115 aa7.94□□□□□ -1.14
PTPN2-201ENST00000309660 MRPL23Q16540 153 aaKnown RBP7.94□□□□□ -1.14
PTPN2-201ENST00000309660 A0A087WYN8 130 aa7.93□□□□□ -1.14
PTPN2-201ENST00000309660 CD164L2Q6UWJ8 174 aa7.93□□□□□ -1.14
PTPN2-201ENST00000309660 Q8IZM0 81 aa7.92□□□□□ -1.14
PTPN2-201ENST00000309660 LECT2O14960 151 aa7.92□□□□□ -1.14
PTPN2-201ENST00000309660 GAGE2BQ13066 116 aa7.92□□□□□ -1.14
PTPN2-201ENST00000309660 GAGE2EQ4V326 116 aa7.92□□□□□ -1.14
PTPN2-201ENST00000309660 C6orf223Q8N319 242 aa7.92□□□□□ -1.14
PTPN2-201ENST00000309660 GAGE2DQ9UEU5 116 aa7.92□□□□□ -1.14
PTPN2-201ENST00000309660 SLPIP03973 132 aa7.91□□□□□ -1.14
PTPN2-201ENST00000309660 RPL28P46779 137 aaKnown RBP7.91□□□□□ -1.14
PTPN2-201ENST00000309660 PKD1L1Q8TDX9 2849 aa7.91□□□□□ -1.14
PTPN2-201ENST00000309660 TRACP01848 142 aa7.9□□□□□ -1.14
PTPN2-201ENST00000309660 NCR3O14931 201 aa7.89□□□□□ -1.15
PTPN2-201ENST00000309660 SPAG11BQ08648 103 aa7.89□□□□□ -1.15
PTPN2-201ENST00000309660 GAGE2AQ6NT46 116 aa7.89□□□□□ -1.15
PTPN2-201ENST00000309660 UNQ6190/PRO20217Q6UXQ8 127 aa7.89□□□□□ -1.15
PTPN2-201ENST00000309660 WFDC9Q8NEX5 89 aa7.88□□□□□ -1.15
PTPN2-201ENST00000309660 ANAPC13Q9BS18 74 aa7.88□□□□□ -1.15
PTPN2-201ENST00000309660 C10orf25Q5T742 122 aa7.88□□□□□ -1.15
PTPN2-201ENST00000309660 LELP1Q5T871 98 aa7.88□□□□□ -1.15
PTPN2-201ENST00000309660 C3orf56Q8N813 242 aa7.88□□□□□ -1.15
PTPN2-201ENST00000309660 COL6A5A8TX70 2615 aa7.88□□□□□ -1.15
PTPN2-201ENST00000309660 KIAA0087Q14695 138 aa7.87□□□□□ -1.15
PTPN2-201ENST00000309660 TENM3Q9P273 2699 aa7.87□□□□□ -1.15
PTPN2-201ENST00000309660 Q6ZTC4 211 aa7.87□□□□□ -1.15
PTPN2-201ENST00000309660 FBN1P35555 2871 aaKnown RBP7.86□□□□□ -1.15
PTPN2-201ENST00000309660 KRTAP10-11P60412 298 aa7.86□□□□□ -1.15
PTPN2-201ENST00000309660 S100A7L2Q5SY68 101 aa7.86□□□□□ -1.15
PTPN2-201ENST00000309660 LINC01600Q96MT4 127 aa7.86□□□□□ -1.15
PTPN2-201ENST00000309660 WFDC10BQ8IUB3 73 aa7.86□□□□□ -1.15
PTPN2-201ENST00000309660 C14orf132Q9NPU4 83 aa7.86□□□□□ -1.15
PTPN2-201ENST00000309660 CYSRT1A8MQ03 144 aa7.85□□□□□ -1.15
PTPN2-201ENST00000309660 H0YGX0 51 aa7.85□□□□□ -1.15
PTPN2-201ENST00000309660 C9orf129Q5T035 196 aaKnown RBP7.85□□□□□ -1.15
PTPN2-201ENST00000309660 KPRPQ5T749 579 aaPredicted RBP7.85□□□□□ -1.15
PTPN2-201ENST00000309660 HIGD2BQ4VC39 106 aa7.85□□□□□ -1.15
PTPN2-201ENST00000309660 LYPD5Q6UWN5 251 aa7.85□□□□□ -1.15
PTPN2-201ENST00000309660 PRB2P02812 416 aaPredicted RBP7.84□□□□□ -1.15
PTPN2-201ENST00000309660 CXCL5P42830 114 aa7.84□□□□□ -1.15
PTPN2-201ENST00000309660 XAGE1AQ9HD64 81 aa7.84□□□□□ -1.15
PTPN2-201ENST00000309660 KRTAP24-1Q3LI83 254 aa7.84□□□□□ -1.15
PTPN2-201ENST00000309660 ENHOQ6UWT2 76 aa7.83□□□□□ -1.16
PTPN2-201ENST00000309660 C22orf24Q9Y442 160 aa7.83□□□□□ -1.16
PTPN2-201ENST00000309660 RPL18AQ02543 176 aaKnown RBP7.83□□□□□ -1.16
PTPN2-201ENST00000309660 C6orf99Q4VX62 202 aa7.82□□□□□ -1.16
PTPN2-201ENST00000309660 Q8NDZ9 215 aa7.82□□□□□ -1.16
PTPN2-201ENST00000309660 INAFM2P0DMQ5 153 aa7.82□□□□□ -1.16
PTPN2-201ENST00000309660 NANOS2P60321 138 aaKnown RBP7.82□□□□□ -1.16
PTPN2-201ENST00000309660 PPDPFQ9H3Y8 114 aa7.82□□□□□ -1.16
PTPN2-201ENST00000309660 DEFB121Q5J5C9 76 aa7.82□□□□□ -1.16
PTPN2-201ENST00000309660 TMEM126AQ9H061 195 aa7.82□□□□□ -1.16
PTPN2-201ENST00000309660 A0A0J9YWU9 116 aa7.81□□□□□ -1.16
PTPN2-201ENST00000309660 FAM240AA0A1B0GVK7 77 aa7.81□□□□□ -1.16
PTPN2-201ENST00000309660 NDUFV3P56181 108 aaKnown RBP7.81□□□□□ -1.16
PTPN2-201ENST00000309660 LINC01561Q8N1V8 128 aa7.8□□□□□ -1.16
PTPN2-201ENST00000309660 SMCR5Q8TEV8 140 aa7.8□□□□□ -1.16
PTPN2-201ENST00000309660 ORMDL1Q9P0S3 153 aa7.8□□□□□ -1.16
PTPN2-201ENST00000309660 ZNF561-AS1K7EIQ3 104 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms