RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 TIRAPP58753 221 aa3.47□□□□□ -1.85
CKS1B-201ENST00000308987 LINC01620Q4KN68 170 aa3.47□□□□□ -1.85
CKS1B-201ENST00000308987 MUSTN1Q8IVN3 82 aa3.47□□□□□ -1.85
CKS1B-201ENST00000308987 ANKRD29Q8N6D5 301 aa3.47□□□□□ -1.85
CKS1B-201ENST00000308987 COPS9Q8WXC6 57 aa3.47□□□□□ -1.85
CKS1B-201ENST00000308987 FAM110AQ9BQ89 295 aa3.47□□□□□ -1.85
CKS1B-201ENST00000308987 HERC1Q15751 4861 aa3.46□□□□□ -1.86
CKS1B-201ENST00000308987 IGKV3-7A0A075B6H7 116 aa3.46□□□□□ -1.86
CKS1B-201ENST00000308987 IGLV5-45A0A087WSX0 123 aa3.46□□□□□ -1.86
CKS1B-201ENST00000308987 FAM240AA0A1B0GVK7 77 aa3.46□□□□□ -1.86
CKS1B-201ENST00000308987 C9JAW5 83 aa3.46□□□□□ -1.86
CKS1B-201ENST00000308987 EMP1P54849 157 aa3.46□□□□□ -1.86
CKS1B-201ENST00000308987 XGP55808 180 aa3.46□□□□□ -1.86
CKS1B-201ENST00000308987 ZNF415Q09FC8 603 aa3.46□□□□□ -1.86
CKS1B-201ENST00000308987 MIAQ16674 131 aa3.46□□□□□ -1.86
CKS1B-201ENST00000308987 FAM74A4Q5TZK3 123 aa3.46□□□□□ -1.86
CKS1B-201ENST00000308987 FAM19A3Q7Z5A8 133 aa3.46□□□□□ -1.86
CKS1B-201ENST00000308987 VSIG2Q96IQ7 327 aa3.46□□□□□ -1.86
CKS1B-201ENST00000308987 LITAFQ99732 161 aa3.46□□□□□ -1.86
CKS1B-201ENST00000308987 GEMIN7Q9H840 131 aaKnown RBP3.46□□□□□ -1.86
CKS1B-201ENST00000308987 NDUFA12Q9UI09 145 aa3.46□□□□□ -1.86
CKS1B-201ENST00000308987 RBMY1BA6NDE4 496 aaKnown RBP3.45□□□□□ -1.86
CKS1B-201ENST00000308987 RBMY1EA6NEQ0 496 aaKnown RBP3.45□□□□□ -1.86
CKS1B-201ENST00000308987 IGHV3-53P01767 116 aa3.45□□□□□ -1.86
CKS1B-201ENST00000308987 MT-ATP8P03928 68 aa3.45□□□□□ -1.86
CKS1B-201ENST00000308987 RBMY1DP0C7P1 496 aaKnown RBP3.45□□□□□ -1.86
CKS1B-201ENST00000308987 SPINK13Q1W4C9 94 aa3.45□□□□□ -1.86
CKS1B-201ENST00000308987 FAM104AQ969W3 186 aa3.45□□□□□ -1.86
CKS1B-201ENST00000308987 WFDC10AQ9H1F0 79 aa3.45□□□□□ -1.86
CKS1B-201ENST00000308987 PEMTQ9UBM1 199 aa3.45□□□□□ -1.86
CKS1B-201ENST00000308987 FAT1Q14517 4588 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 TRAV12-2A0A075B6T6 113 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 TRAV25A0A0B4J276 109 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 H3BMM0 161 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 LST1O00453 97 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 NDUFA1O15239 70 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 RS1O15537 224 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 SNCGO76070 127 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 ACYP1P07311 99 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 EDN2P20800 178 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 SYNJ2BPP57105 145 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 GAGE2BQ13066 116 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 CIRBPQ14011 172 aaKnown RBP3.44□□□□□ -1.86
CKS1B-201ENST00000308987 Q1RN00 199 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 GAGE2EQ4V326 116 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 TMEM61Q8N0U2 210 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 UBE2WQ96B02 151 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 OPRPNQ99935 248 aaPredicted RBP3.44□□□□□ -1.86
CKS1B-201ENST00000308987 CHCHD7Q9BUK0 85 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 GAGE2DQ9UEU5 116 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 UBE2D4Q9Y2X8 147 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 CSDC2Q9Y534 153 aaKnown RBP3.44□□□□□ -1.86
CKS1B-201ENST00000308987 ICOSQ9Y6W8 199 aa3.44□□□□□ -1.86
CKS1B-201ENST00000308987 TRAV8-4A0A0B4J246 113 aa3.43□□□□□ -1.86
CKS1B-201ENST00000308987 TRBV10-1A0A0K0K1A3 114 aa3.43□□□□□ -1.86
CKS1B-201ENST00000308987 PRSS2P07478 247 aa3.43□□□□□ -1.86
CKS1B-201ENST00000308987 HERVK_113P63121 156 aa3.43□□□□□ -1.86
CKS1B-201ENST00000308987 HERV-K104P63124 156 aa3.43□□□□□ -1.86
CKS1B-201ENST00000308987 GAGE5Q13069 117 aa3.43□□□□□ -1.86
CKS1B-201ENST00000308987 GAGE6Q13070 117 aa3.43□□□□□ -1.86
CKS1B-201ENST00000308987 SFTA2Q6UW10 78 aa3.43□□□□□ -1.86
CKS1B-201ENST00000308987 C2orf82Q6UX34 121 aa3.43□□□□□ -1.86
CKS1B-201ENST00000308987 ANAPC13Q9BS18 74 aa3.43□□□□□ -1.86
CKS1B-201ENST00000308987 TRAV26-1A0A087WT03 109 aa3.42□□□□□ -1.86
CKS1B-201ENST00000308987 TRAV4A0A0B4J268 109 aa3.42□□□□□ -1.86
CKS1B-201ENST00000308987 H7C423 109 aa3.42□□□□□ -1.86
CKS1B-201ENST00000308987 INSP01308 110 aa3.42□□□□□ -1.86
CKS1B-201ENST00000308987 RBMY1A1P0DJD3 496 aaKnown RBP3.42□□□□□ -1.86
CKS1B-201ENST00000308987 RBMY1CP0DJD4 496 aa3.42□□□□□ -1.86
CKS1B-201ENST00000308987 CMC4P56277 68 aaPredicted RBP3.42□□□□□ -1.86
CKS1B-201ENST00000308987 DEFB131AP59861 70 aa3.42□□□□□ -1.86
CKS1B-201ENST00000308987 RBMY1FQ15415 496 aaKnown RBP3.42□□□□□ -1.86
CKS1B-201ENST00000308987 ADAMTSL4-AS1Q5T5F5 129 aa3.42□□□□□ -1.86
CKS1B-201ENST00000308987 C11orf72Q8NBR9 251 aa3.42□□□□□ -1.86
CKS1B-201ENST00000308987 IMUPQ9GZP8 106 aa3.42□□□□□ -1.86
CKS1B-201ENST00000308987 IGHV3-64A0A075B6Q5 118 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 TRAV8-3A0A0A6YYJ7 113 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 TRBV7-7A0A0K0K1E9 115 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 KNCNA6PVL3 124 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 COX7A2LO14548 114 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 LY6G6CO95867 125 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 TRACP01848 142 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 NDUFV3P56181 108 aaKnown RBP3.41□□□□□ -1.86
CKS1B-201ENST00000308987 RPL36AP83881 106 aaKnown RBP3.41□□□□□ -1.86
CKS1B-201ENST00000308987 DAZ2Q13117 558 aaKnown RBP3.41□□□□□ -1.86
CKS1B-201ENST00000308987 TTC32Q5I0X7 151 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 FAM222AQ5U5X8 452 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 DGAT2L7PQ6IED9 249 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 DAZ4Q86SG3 579 aaKnown RBP3.41□□□□□ -1.86
CKS1B-201ENST00000308987 LINC00308Q8TCZ7 52 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 TMEM101Q96IK0 257 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 LINC01587Q99440 93 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 OVOL2Q9BRP0 275 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 MAP6D1Q9H9H5 199 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 DAZ3Q9NR90 486 aaKnown RBP3.41□□□□□ -1.86
CKS1B-201ENST00000308987 CDKN2A-AS1Q9UH64 79 aa3.41□□□□□ -1.86
CKS1B-201ENST00000308987 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
CKS1B-201ENST00000308987 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.4□□□□□ -1.87
CKS1B-201ENST00000308987 TEX49A0A1B0GTD5 131 aa3.4□□□□□ -1.87
CKS1B-201ENST00000308987 IGKV2-29A2NJV5 120 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms