RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 H0Y8G0 127 aa14.11□□□□□ -0.15
SNUPN-201ENST00000308588 PRSS2P07478 247 aa14.11□□□□□ -0.15
SNUPN-201ENST00000308588 ODF1Q14990 250 aa14.11□□□□□ -0.15
SNUPN-201ENST00000308588 C6orf226Q5I0X4 101 aa14.11□□□□□ -0.15
SNUPN-201ENST00000308588 CIRBP-AS1Q8TBR5 109 aa14.1□□□□□ -0.15
SNUPN-201ENST00000308588 C6orf48Q9UBA6 75 aa14.1□□□□□ -0.15
SNUPN-201ENST00000308588 TMEM170BQ5T4T1 132 aa14.1□□□□□ -0.15
SNUPN-201ENST00000308588 A0A096LNI7 61 aa14.09□□□□□ -0.15
SNUPN-201ENST00000308588 IGLV5-39A0A0G2JS06 123 aa14.08□□□□□ -0.16
SNUPN-201ENST00000308588 LOC107984640A0A0U1RRK4 108 aa14.08□□□□□ -0.16
SNUPN-201ENST00000308588 SPACA4Q8TDM5 124 aa14.08□□□□□ -0.16
SNUPN-201ENST00000308588 COX7B2Q8TF08 81 aa14.08□□□□□ -0.16
SNUPN-201ENST00000308588 PKIGQ9Y2B9 76 aa14.08□□□□□ -0.16
SNUPN-201ENST00000308588 IGKV2-24A0A0C4DH68 120 aa14.07□□□□□ -0.16
SNUPN-201ENST00000308588 CKS1BP61024 79 aa14.07□□□□□ -0.16
SNUPN-201ENST00000308588 TRBV30A0A0K0K1B3 111 aa14.06□□□□□ -0.16
SNUPN-201ENST00000308588 SMR3BP02814 79 aaPredicted RBP14.06□□□□□ -0.16
SNUPN-201ENST00000308588 MAP1LC3CQ9BXW4 147 aa14.06□□□□□ -0.16
SNUPN-201ENST00000308588 FAT1Q14517 4588 aa14.05□□□□□ -0.16
SNUPN-201ENST00000308588 Q8N1X5 172 aa14.05□□□□□ -0.16
SNUPN-201ENST00000308588 CXCL5P42830 114 aa14.04□□□□□ -0.16
SNUPN-201ENST00000308588 PTTG1IPP53801 180 aa14.04□□□□□ -0.16
SNUPN-201ENST00000308588 GAGE2BQ13066 116 aa14.04□□□□□ -0.16
SNUPN-201ENST00000308588 MAJINQ3KP22 176 aa14.04□□□□□ -0.16
SNUPN-201ENST00000308588 DPH3Q96FX2 82 aa14.04□□□□□ -0.16
SNUPN-201ENST00000308588 A0A087WYN8 130 aa14.03□□□□□ -0.16
SNUPN-201ENST00000308588 TMEM223A0PJW6 202 aa14.03□□□□□ -0.16
SNUPN-201ENST00000308588 TLX1NBP0CAT3 122 aa14.03□□□□□ -0.16
SNUPN-201ENST00000308588 C9orf116Q5BN46 136 aaPredicted RBP14.03□□□□□ -0.16
SNUPN-201ENST00000308588 PMCHL2Q9BQD1 86 aa14.03□□□□□ -0.16
SNUPN-201ENST00000308588 RPL18AQ02543 176 aaKnown RBP14.02□□□□□ -0.16
SNUPN-201ENST00000308588 LINC00474Q9P2X8 69 aa14.02□□□□□ -0.16
SNUPN-201ENST00000308588 SYS1-DBNDD2H3BUS1 97 aa14.01□□□□□ -0.17
SNUPN-201ENST00000308588 Q6ZRP5 223 aa14□□□□□ -0.17
SNUPN-201ENST00000308588 PLAC8Q9NZF1 115 aa14□□□□□ -0.17
SNUPN-201ENST00000308588 PLNP26678 52 aa14□□□□□ -0.17
SNUPN-201ENST00000308588 DPM2O94777 84 aa13.99□□□□□ -0.17
SNUPN-201ENST00000308588 STPG4Q8N801 248 aa13.99□□□□□ -0.17
SNUPN-201ENST00000308588 NDUFC2-KCTD14E9PQ53 114 aa13.98□□□□□ -0.17
SNUPN-201ENST00000308588 KRTAP4-5Q9BYR2 181 aa13.98□□□□□ -0.17
SNUPN-201ENST00000308588 IGKCP01834 107 aa13.97□□□□□ -0.17
SNUPN-201ENST00000308588 C3orf79P0CE67 100 aa13.97□□□□□ -0.17
SNUPN-201ENST00000308588 GAGE2EQ4V326 116 aa13.95□□□□□ -0.18
SNUPN-201ENST00000308588 PET117Q6UWS5 81 aa13.95□□□□□ -0.18
SNUPN-201ENST00000308588 GAGE2DQ9UEU5 116 aa13.95□□□□□ -0.18
SNUPN-201ENST00000308588 LINC01545Q5VT33 79 aa13.95□□□□□ -0.18
SNUPN-201ENST00000308588 LINC00528Q8N1L1 170 aa13.95□□□□□ -0.18
SNUPN-201ENST00000308588 HIST3H2BBQ8N257 126 aa13.95□□□□□ -0.18
SNUPN-201ENST00000308588 EPM2AB3EWF7 344 aa13.94□□□□□ -0.18
SNUPN-201ENST00000308588 A0A1W2PNN7 141 aa13.93□□□□□ -0.18
SNUPN-201ENST00000308588 S100A6P06703 90 aa13.93□□□□□ -0.18
SNUPN-201ENST00000308588 KRTDAPP60985 99 aa13.93□□□□□ -0.18
SNUPN-201ENST00000308588 Q5VSD8 79 aa13.93□□□□□ -0.18
SNUPN-201ENST00000308588 ZNF625Q96I27 306 aaPredicted RBP13.93□□□□□ -0.18
SNUPN-201ENST00000308588 FAM229AH3BQW9 127 aa13.92□□□□□ -0.18
SNUPN-201ENST00000308588 HIST1H2BLQ99880 126 aa13.9□□□□□ -0.18
SNUPN-201ENST00000308588 C9orf129Q5T035 196 aaKnown RBP13.9□□□□□ -0.19
SNUPN-201ENST00000308588 SFTA2Q6UW10 78 aa13.9□□□□□ -0.19
SNUPN-201ENST00000308588 FAM168BA1KXE4 195 aa13.88□□□□□ -0.19
SNUPN-201ENST00000308588 S100A2P29034 98 aa13.88□□□□□ -0.19
SNUPN-201ENST00000308588 SNRPEP62304 92 aaKnown RBP13.88□□□□□ -0.19
SNUPN-201ENST00000308588 LEPROTO15243 131 aa13.87□□□□□ -0.19
SNUPN-201ENST00000308588 TSPEAR-AS2P59090 65 aa13.87□□□□□ -0.19
SNUPN-201ENST00000308588 HERVK_113P61574 105 aa13.87□□□□□ -0.19
SNUPN-201ENST00000308588 XAGE1AQ9HD64 81 aa13.87□□□□□ -0.19
SNUPN-201ENST00000308588 ERG28Q9UKR5 140 aa13.86□□□□□ -0.19
SNUPN-201ENST00000308588 VPS13BQ7Z7G8 4022 aa13.86□□□□□ -0.19
SNUPN-201ENST00000308588 C5orf52A6NGY3 159 aa13.85□□□□□ -0.19
SNUPN-201ENST00000308588 PFN2P35080 140 aa13.85□□□□□ -0.19
SNUPN-201ENST00000308588 KRTAP7-1Q8IUC3 87 aa13.85□□□□□ -0.19
SNUPN-201ENST00000308588 PLEKHB2Q96CS7 222 aa13.85□□□□□ -0.19
SNUPN-201ENST00000308588 NDUFA12Q9UI09 145 aa13.85□□□□□ -0.19
SNUPN-201ENST00000308588 J3QQQ9 107 aa13.84□□□□□ -0.19
SNUPN-201ENST00000308588 KRTAP10-4P60372 401 aaPredicted RBP13.84□□□□□ -0.19
SNUPN-201ENST00000308588 ABCA13Q86UQ4 5058 aa13.83□□□□□ -0.2
SNUPN-201ENST00000308588 PLA2G1BP04054 148 aaKnown RBP13.83□□□□□ -0.2
SNUPN-201ENST00000308588 COX17Q14061 63 aa13.83□□□□□ -0.2
SNUPN-201ENST00000308588 E9PLD3 99 aa13.82□□□□□ -0.2
SNUPN-201ENST00000308588 FAM19A5Q7Z5A7 132 aaPredicted RBP13.82□□□□□ -0.2
SNUPN-201ENST00000308588 C20orf202A1L168 122 aa13.81□□□□□ -0.2
SNUPN-201ENST00000308588 C7orf33Q8WU49 177 aa13.81□□□□□ -0.2
SNUPN-201ENST00000308588 MYMXA0A1B0GTQ4 84 aa13.8□□□□□ -0.2
SNUPN-201ENST00000308588 RPL37AP61513 92 aaKnown RBP13.8□□□□□ -0.2
SNUPN-201ENST00000308588 HERV-K104P63124 156 aa13.8□□□□□ -0.2
SNUPN-201ENST00000308588 SERTAD4-AS1Q5TG53 156 aa13.8□□□□□ -0.2
SNUPN-201ENST00000308588 PHF5AQ7RTV0 110 aaKnown RBP13.8□□□□□ -0.2
SNUPN-201ENST00000308588 LGALS3P17931 250 aaKnown RBP13.79□□□□□ -0.2
SNUPN-201ENST00000308588 SRRM2Q9UQ35 2752 aaKnown RBP13.78□□□□□ -0.2
SNUPN-201ENST00000308588 SND1-IT1Q9HBX3 110 aa13.78□□□□□ -0.2
SNUPN-201ENST00000308588 NMUP48645 174 aa13.77□□□□□ -0.21
SNUPN-201ENST00000308588 LINC00158P58513 81 aa13.77□□□□□ -0.21
SNUPN-201ENST00000308588 A0A0U1RRA0 63 aa13.76□□□□□ -0.21
SNUPN-201ENST00000308588 SMIM13P0DJ93 91 aa13.76□□□□□ -0.21
SNUPN-201ENST00000308588 ATOH7Q8N100 152 aa13.76□□□□□ -0.21
SNUPN-201ENST00000308588 M0QXV9 152 aa13.75□□□□□ -0.21
SNUPN-201ENST00000308588 MEIG1Q5JSS6 88 aa13.75□□□□□ -0.21
SNUPN-201ENST00000308588 PCLOQ9Y6V0 5065 aa13.75□□□□□ -0.21
SNUPN-201ENST00000308588 IGKV2D-26A0A0A0MRZ7 120 aa13.74□□□□□ -0.21
SNUPN-201ENST00000308588 PLA2G2DQ9UNK4 145 aa13.74□□□□□ -0.21
SNUPN-201ENST00000308588 AKR1D1P51857 326 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms