RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 LINC00467Q9BRT7 94 aa7.37□□□□□ -1.23
APOBEC3F-201ENST00000308521 SERP1Q9Y6X1 66 aa7.37□□□□□ -1.23
APOBEC3F-201ENST00000308521 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.36□□□□□ -1.23
APOBEC3F-201ENST00000308521 IGHV3OR16-12A0A075B7B8 117 aa7.36□□□□□ -1.23
APOBEC3F-201ENST00000308521 IGKV2-29A2NJV5 120 aaPredicted RBP7.36□□□□□ -1.23
APOBEC3F-201ENST00000308521 IGHV3-53P01767 116 aa7.36□□□□□ -1.23
APOBEC3F-201ENST00000308521 Q6ZSN1 163 aa7.36□□□□□ -1.23
APOBEC3F-201ENST00000308521 IGLV5-39A0A0G2JS06 123 aa7.36□□□□□ -1.23
APOBEC3F-201ENST00000308521 IGLV1-51P01701 117 aa7.36□□□□□ -1.23
APOBEC3F-201ENST00000308521 FAM19A3Q7Z5A8 133 aa7.36□□□□□ -1.23
APOBEC3F-201ENST00000308521 LINC00308Q8TCZ7 52 aa7.36□□□□□ -1.23
APOBEC3F-201ENST00000308521 CDKN2A-AS1Q9UH64 79 aa7.36□□□□□ -1.23
APOBEC3F-201ENST00000308521 BEAN1Q3B7T3 259 aa7.35□□□□□ -1.23
APOBEC3F-201ENST00000308521 STHQ8IWL8 128 aa7.35□□□□□ -1.23
APOBEC3F-201ENST00000308521 NACAE9PAV3 2078 aa7.35□□□□□ -1.23
APOBEC3F-201ENST00000308521 SEC61GP60059 68 aa7.35□□□□□ -1.23
APOBEC3F-201ENST00000308521 LINC00482Q8N8I6 264 aa7.35□□□□□ -1.23
APOBEC3F-201ENST00000308521 CYSTM1Q9H1C7 97 aa7.35□□□□□ -1.23
APOBEC3F-201ENST00000308521 Q9UF83 564 aa7.35□□□□□ -1.23
APOBEC3F-201ENST00000308521 RPL35AP18077 110 aaKnown RBP7.34□□□□□ -1.23
APOBEC3F-201ENST00000308521 DAZ2Q13117 558 aaKnown RBP7.34□□□□□ -1.23
APOBEC3F-201ENST00000308521 DAZ4Q86SG3 579 aaKnown RBP7.34□□□□□ -1.23
APOBEC3F-201ENST00000308521 DAZ3Q9NR90 486 aaKnown RBP7.34□□□□□ -1.23
APOBEC3F-201ENST00000308521 C1orf43Q9BWL3 253 aa7.34□□□□□ -1.23
APOBEC3F-201ENST00000308521 V9GYY9 64 aa7.34□□□□□ -1.23
APOBEC3F-201ENST00000308521 BCE1O60756 84 aa7.33□□□□□ -1.24
APOBEC3F-201ENST00000308521 OVOL2Q9BRP0 275 aa7.33□□□□□ -1.24
APOBEC3F-201ENST00000308521 COX6A2Q02221 97 aa7.33□□□□□ -1.24
APOBEC3F-201ENST00000308521 C11orf72Q8NBR9 251 aa7.33□□□□□ -1.24
APOBEC3F-201ENST00000308521 Q9H8V8 135 aa7.33□□□□□ -1.24
APOBEC3F-201ENST00000308521 USP17L23D6RBM5 183 aa7.32□□□□□ -1.24
APOBEC3F-201ENST00000308521 DGAT2L7PQ6IED9 249 aa7.32□□□□□ -1.24
APOBEC3F-201ENST00000308521 FAM236DA0A1B0GTK5 79 aa7.32□□□□□ -1.24
APOBEC3F-201ENST00000308521 BAALC-AS2P0C853 105 aa7.32□□□□□ -1.24
APOBEC3F-201ENST00000308521 FAM236CP0DP71 79 aa7.32□□□□□ -1.24
APOBEC3F-201ENST00000308521 LINC00242Q5T6M2 205 aa7.32□□□□□ -1.24
APOBEC3F-201ENST00000308521 LINC00336Q6ZUF6 198 aa7.32□□□□□ -1.24
APOBEC3F-201ENST00000308521 C19orf73Q9NVV2 129 aa7.32□□□□□ -1.24
APOBEC3F-201ENST00000308521 IGHV3-38A0A0C4DH36 116 aa7.31□□□□□ -1.24
APOBEC3F-201ENST00000308521 KRTAP24-1Q3LI83 254 aa7.31□□□□□ -1.24
APOBEC3F-201ENST00000308521 ATP5EP2Q5VTU8 51 aa7.31□□□□□ -1.24
APOBEC3F-201ENST00000308521 SMIM26A0A096LP01 95 aa7.31□□□□□ -1.24
APOBEC3F-201ENST00000308521 SMIM1B2RUZ4 78 aa7.3□□□□□ -1.24
APOBEC3F-201ENST00000308521 SOSTDC1Q6X4U4 206 aa7.3□□□□□ -1.24
APOBEC3F-201ENST00000308521 ZNF625Q96I27 306 aaPredicted RBP7.3□□□□□ -1.24
APOBEC3F-201ENST00000308521 DNAL4O96015 105 aa7.3□□□□□ -1.24
APOBEC3F-201ENST00000308521 S100A7L2Q5SY68 101 aa7.3□□□□□ -1.24
APOBEC3F-201ENST00000308521 C1orf158Q8N1D5 194 aa7.3□□□□□ -1.24
APOBEC3F-201ENST00000308521 INSP01308 110 aa7.29□□□□□ -1.24
APOBEC3F-201ENST00000308521 GIG44P09565 113 aaPredicted RBP7.29□□□□□ -1.24
APOBEC3F-201ENST00000308521 NOTCH1P46531 2555 aa7.29□□□□□ -1.24
APOBEC3F-201ENST00000308521 ANK2Q01484 3957 aa7.28□□□□□ -1.24
APOBEC3F-201ENST00000308521 FHL2Q14192 279 aa7.28□□□□□ -1.24
APOBEC3F-201ENST00000308521 TMEM243Q9BU79 118 aa7.28□□□□□ -1.24
APOBEC3F-201ENST00000308521 LINC01561Q8N1V8 128 aa7.27□□□□□ -1.25
APOBEC3F-201ENST00000308521 OBSCN-AS1Q96MR7 158 aa7.27□□□□□ -1.25
APOBEC3F-201ENST00000308521 C22orf24Q9Y442 160 aa7.27□□□□□ -1.25
APOBEC3F-201ENST00000308521 TRBV10-1A0A0K0K1A3 114 aa7.27□□□□□ -1.25
APOBEC3F-201ENST00000308521 CMYA5Q8N3K9 4069 aa7.27□□□□□ -1.25
APOBEC3F-201ENST00000308521 ATP5EP56381 51 aaPredicted RBP7.26□□□□□ -1.25
APOBEC3F-201ENST00000308521 C1orf195Q5TG92 126 aa7.26□□□□□ -1.25
APOBEC3F-201ENST00000308521 IL17DQ8TAD2 202 aa7.26□□□□□ -1.25
APOBEC3F-201ENST00000308521 TRAV13-2A0A0B4J235 113 aa7.26□□□□□ -1.25
APOBEC3F-201ENST00000308521 TRBV10-3A0A0K0K1G6 114 aa7.26□□□□□ -1.25
APOBEC3F-201ENST00000308521 RPL28P46779 137 aaKnown RBP7.26□□□□□ -1.25
APOBEC3F-201ENST00000308521 A0A0U1RRA0 63 aa7.25□□□□□ -1.25
APOBEC3F-201ENST00000308521 RPL36AP83881 106 aaKnown RBP7.25□□□□□ -1.25
APOBEC3F-201ENST00000308521 C9orf66Q5T8R8 295 aa7.25□□□□□ -1.25
APOBEC3F-201ENST00000308521 RPL36ALQ969Q0 106 aaKnown RBP7.25□□□□□ -1.25
APOBEC3F-201ENST00000308521 CDC42SE2Q9NRR3 84 aa7.25□□□□□ -1.25
APOBEC3F-201ENST00000308521 FAM218AQ96MZ4 157 aa7.24□□□□□ -1.25
APOBEC3F-201ENST00000308521 K7EQD1 137 aa7.24□□□□□ -1.25
APOBEC3F-201ENST00000308521 LCE2BO14633 110 aa7.24□□□□□ -1.25
APOBEC3F-201ENST00000308521 NTM-AS1Q6ZSK4 140 aa7.24□□□□□ -1.25
APOBEC3F-201ENST00000308521 TRGV1A0A0A0MS02 117 aa7.24□□□□□ -1.25
APOBEC3F-201ENST00000308521 CMC4P56277 68 aaPredicted RBP7.24□□□□□ -1.25
APOBEC3F-201ENST00000308521 NOP10Q9NPE3 64 aaKnown RBP7.24□□□□□ -1.25
APOBEC3F-201ENST00000308521 Q6ZTI0 123 aa7.23□□□□□ -1.25
APOBEC3F-201ENST00000308521 PKIGQ9Y2B9 76 aa7.23□□□□□ -1.25
APOBEC3F-201ENST00000308521 XCL1P47992 114 aa7.23□□□□□ -1.25
APOBEC3F-201ENST00000308521 TNP2Q05952 138 aa7.23□□□□□ -1.25
APOBEC3F-201ENST00000308521 CSNK1G2-AS1Q8NCQ2 148 aa7.23□□□□□ -1.25
APOBEC3F-201ENST00000308521 GHRHP01286 108 aa7.22□□□□□ -1.25
APOBEC3F-201ENST00000308521 IGKV3D-7A0A0C4DH55 119 aa7.22□□□□□ -1.25
APOBEC3F-201ENST00000308521 NDUFC1O43677 76 aa7.22□□□□□ -1.25
APOBEC3F-201ENST00000308521 CRPP02741 224 aa7.22□□□□□ -1.25
APOBEC3F-201ENST00000308521 NBEAL1Q6ZS30 2694 aa7.22□□□□□ -1.25
APOBEC3F-201ENST00000308521 KLKP1Q107X0 134 aa7.21□□□□□ -1.25
APOBEC3F-201ENST00000308521 WFDC9Q8NEX5 89 aa7.21□□□□□ -1.25
APOBEC3F-201ENST00000308521 H7BZZ5 65 aa7.21□□□□□ -1.26
APOBEC3F-201ENST00000308521 LYPD5Q6UWN5 251 aa7.21□□□□□ -1.26
APOBEC3F-201ENST00000308521 LINC00846Q9NV44 126 aa7.21□□□□□ -1.26
APOBEC3F-201ENST00000308521 TRAV7A0A075B6U4 112 aa7.2□□□□□ -1.26
APOBEC3F-201ENST00000308521 H0YGX0 51 aa7.2□□□□□ -1.26
APOBEC3F-201ENST00000308521 COX7B2Q8TF08 81 aa7.2□□□□□ -1.26
APOBEC3F-201ENST00000308521 MGAM2Q2M2H8 2515 aa7.2□□□□□ -1.26
APOBEC3F-201ENST00000308521 IGKV2-28A0A075B6P5 120 aa7.2□□□□□ -1.26
APOBEC3F-201ENST00000308521 IGKV2D-28P01615 120 aa7.2□□□□□ -1.26
APOBEC3F-201ENST00000308521 LINC00337Q8N6G1 96 aa7.2□□□□□ -1.26
APOBEC3F-201ENST00000308521 PLAC8L1A1L4L8 177 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms