RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 SETD2Q9BYW2 2564 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-201ENST00000307142 ACANP16112 2415 aa7.54□□□□□ -1.2
SYNPO2-201ENST00000307142 A0A1B0GUV1 79 aa7.54□□□□□ -1.2
SYNPO2-201ENST00000307142 IGIPA6NJ69 53 aa7.53□□□□□ -1.2
SYNPO2-201ENST00000307142 POLQO75417 2590 aa7.53□□□□□ -1.2
SYNPO2-201ENST00000307142 PRR3P79522 188 aaKnown RBP7.53□□□□□ -1.2
SYNPO2-201ENST00000307142 F8P00451 2351 aa7.53□□□□□ -1.2
SYNPO2-201ENST00000307142 PTH2Q96A98 100 aa7.53□□□□□ -1.2
SYNPO2-201ENST00000307142 F8WDY8 70 aa7.52□□□□□ -1.2
SYNPO2-201ENST00000307142 USP9YO00507 2555 aaPredicted RBP7.52□□□□□ -1.21
SYNPO2-201ENST00000307142 TAX1BP3O14907 124 aa7.52□□□□□ -1.21
SYNPO2-201ENST00000307142 TRBV10-3A0A0K0K1G6 114 aa7.52□□□□□ -1.21
SYNPO2-201ENST00000307142 TEX49A0A1B0GTD5 131 aa7.52□□□□□ -1.21
SYNPO2-201ENST00000307142 FAM236AA0A1B0GUQ0 79 aa7.52□□□□□ -1.21
SYNPO2-201ENST00000307142 FAM236BA0A1B0GV22 79 aa7.52□□□□□ -1.21
SYNPO2-201ENST00000307142 MKI67P46013 3256 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-201ENST00000307142 SMIM1B2RUZ4 78 aa7.51□□□□□ -1.21
SYNPO2-201ENST00000307142 SPATA3Q8NHX4 192 aa7.51□□□□□ -1.21
SYNPO2-201ENST00000307142 C2orf48Q96LS8 159 aa7.51□□□□□ -1.21
SYNPO2-201ENST00000307142 Q6ZRU5 148 aa7.51□□□□□ -1.21
SYNPO2-201ENST00000307142 ATOX1O00244 68 aa7.5□□□□□ -1.21
SYNPO2-201ENST00000307142 CSDC2Q9Y534 153 aaKnown RBP7.5□□□□□ -1.21
SYNPO2-201ENST00000307142 TMEM258P61165 79 aa7.5□□□□□ -1.21
SYNPO2-201ENST00000307142 C11orf72Q8NBR9 251 aa7.5□□□□□ -1.21
SYNPO2-201ENST00000307142 TP73-AS1Q9UF72 201 aa7.49□□□□□ -1.21
SYNPO2-201ENST00000307142 LINC00315P59091 139 aa7.49□□□□□ -1.21
SYNPO2-201ENST00000307142 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.49□□□□□ -1.21
SYNPO2-201ENST00000307142 SMIM20Q8N5G0 67 aa7.49□□□□□ -1.21
SYNPO2-201ENST00000307142 NDUFV3P56181 108 aaKnown RBP7.48□□□□□ -1.21
SYNPO2-201ENST00000307142 NBDYA0A0U1RRE5 68 aa7.48□□□□□ -1.21
SYNPO2-201ENST00000307142 FAM236DA0A1B0GTK5 79 aa7.48□□□□□ -1.21
SYNPO2-201ENST00000307142 FAM236CP0DP71 79 aa7.48□□□□□ -1.21
SYNPO2-201ENST00000307142 KRTAP10-11P60412 298 aa7.48□□□□□ -1.21
SYNPO2-201ENST00000307142 Q9BRP9 147 aa7.48□□□□□ -1.21
SYNPO2-201ENST00000307142 SDIM1Q6ZPB5 146 aa7.48□□□□□ -1.21
SYNPO2-201ENST00000307142 ENHOQ6UWT2 76 aa7.48□□□□□ -1.21
SYNPO2-201ENST00000307142 WFDC13Q8IUB5 93 aa7.48□□□□□ -1.21
SYNPO2-201ENST00000307142 LINC00337Q8N6G1 96 aa7.48□□□□□ -1.21
SYNPO2-201ENST00000307142 MTORP42345 2549 aa7.48□□□□□ -1.21
SYNPO2-201ENST00000307142 RTL8CO15255 209 aa7.47□□□□□ -1.21
SYNPO2-201ENST00000307142 X6R8D5 127 aa7.47□□□□□ -1.21
SYNPO2-201ENST00000307142 PRYO14603 147 aa7.46□□□□□ -1.21
SYNPO2-201ENST00000307142 K7EIL1 84 aa7.46□□□□□ -1.21
SYNPO2-201ENST00000307142 PRLHP81277 87 aa7.46□□□□□ -1.21
SYNPO2-201ENST00000307142 LST1O00453 97 aa7.46□□□□□ -1.22
SYNPO2-201ENST00000307142 Q8NAQ8 132 aa7.45□□□□□ -1.22
SYNPO2-201ENST00000307142 RETNLBQ9BQ08 111 aa7.45□□□□□ -1.22
SYNPO2-201ENST00000307142 COX8CQ7Z4L0 72 aa7.45□□□□□ -1.22
SYNPO2-201ENST00000307142 H3BNG1 76 aa7.45□□□□□ -1.22
SYNPO2-201ENST00000307142 C22orf24Q9Y442 160 aa7.44□□□□□ -1.22
SYNPO2-201ENST00000307142 J3QL48 77 aa7.44□□□□□ -1.22
SYNPO2-201ENST00000307142 AMELXQ99217 191 aa7.44□□□□□ -1.22
SYNPO2-201ENST00000307142 LINC00588Q9Y4M8 146 aa7.44□□□□□ -1.22
SYNPO2-201ENST00000307142 CHD7Q9P2D1 2997 aa7.44□□□□□ -1.22
SYNPO2-201ENST00000307142 LINC00643Q86TS7 51 aa7.43□□□□□ -1.22
SYNPO2-201ENST00000307142 IGHV6-1A0A0B4J1U7 121 aa7.43□□□□□ -1.22
SYNPO2-201ENST00000307142 EPG5Q9HCE0 2579 aa7.43□□□□□ -1.22
SYNPO2-201ENST00000307142 LIMD2Q9BT23 127 aa7.43□□□□□ -1.22
SYNPO2-201ENST00000307142 LINC01561Q8N1V8 128 aa7.42□□□□□ -1.22
SYNPO2-201ENST00000307142 KRTAP10-3P60369 221 aa7.42□□□□□ -1.22
SYNPO2-201ENST00000307142 Q6ZVQ6 151 aa7.41□□□□□ -1.22
SYNPO2-201ENST00000307142 FAM19A3Q7Z5A8 133 aa7.41□□□□□ -1.22
SYNPO2-201ENST00000307142 Q8N814 137 aa7.41□□□□□ -1.22
SYNPO2-201ENST00000307142 YPEL4Q96NS1 127 aa7.41□□□□□ -1.22
SYNPO2-201ENST00000307142 PLA2G1BP04054 148 aaKnown RBP7.41□□□□□ -1.22
SYNPO2-201ENST00000307142 PRRC2CQ9Y520 2896 aaKnown RBP7.41□□□□□ -1.22
SYNPO2-201ENST00000307142 BRCA2P51587 3418 aa7.41□□□□□ -1.22
SYNPO2-201ENST00000307142 CHTF8P0CG12 524 aa7.4□□□□□ -1.22
SYNPO2-201ENST00000307142 FAM19A4Q96LR4 140 aa7.4□□□□□ -1.22
SYNPO2-201ENST00000307142 A0A096LNT2 108 aa7.39□□□□□ -1.23
SYNPO2-201ENST00000307142 Q8N3U1 123 aa7.39□□□□□ -1.23
SYNPO2-201ENST00000307142 C3orf22Q8N5N4 141 aa7.39□□□□□ -1.23
SYNPO2-201ENST00000307142 Q6JHZ5 121 aa7.39□□□□□ -1.23
SYNPO2-201ENST00000307142 SMCR5Q8TEV8 140 aa7.39□□□□□ -1.23
SYNPO2-201ENST00000307142 TSPEAR-AS2P59090 65 aa7.39□□□□□ -1.23
SYNPO2-201ENST00000307142 LAMA3Q16787 3333 aa7.38□□□□□ -1.23
SYNPO2-201ENST00000307142 FAM30AQ9NZY2 134 aa7.38□□□□□ -1.23
SYNPO2-201ENST00000307142 A8MTW9 85 aa7.38□□□□□ -1.23
SYNPO2-201ENST00000307142 NTM-AS1Q6ZSK4 140 aa7.38□□□□□ -1.23
SYNPO2-201ENST00000307142 ATP5EP2Q5VTU8 51 aa7.38□□□□□ -1.23
SYNPO2-201ENST00000307142 PHF5AQ7RTV0 110 aaKnown RBP7.38□□□□□ -1.23
SYNPO2-201ENST00000307142 HTTP42858 3142 aa7.38□□□□□ -1.23
SYNPO2-201ENST00000307142 ADAMTSL4-AS1Q5T5F5 129 aa7.37□□□□□ -1.23
SYNPO2-201ENST00000307142 A0A087WYN8 130 aa7.37□□□□□ -1.23
SYNPO2-201ENST00000307142 SPACA4Q8TDM5 124 aa7.37□□□□□ -1.23
SYNPO2-201ENST00000307142 KRTAP1-3Q8IUG1 177 aa7.37□□□□□ -1.23
SYNPO2-201ENST00000307142 RPL37AP61513 92 aaKnown RBP7.36□□□□□ -1.23
SYNPO2-201ENST00000307142 C2orf91Q6ZV80 131 aa7.36□□□□□ -1.23
SYNPO2-201ENST00000307142 NDUFC2O95298 119 aa7.36□□□□□ -1.23
SYNPO2-201ENST00000307142 MOBPQ13875 183 aa7.35□□□□□ -1.23
SYNPO2-201ENST00000307142 DEFB116Q30KQ4 102 aa7.35□□□□□ -1.23
SYNPO2-201ENST00000307142 B5MCH6 92 aa7.35□□□□□ -1.23
SYNPO2-201ENST00000307142 Q6ZRP5 223 aa7.35□□□□□ -1.23
SYNPO2-201ENST00000307142 KIF25-AS1Q9Y6Z4 181 aa7.35□□□□□ -1.23
SYNPO2-201ENST00000307142 CR1P17927 2039 aa7.35□□□□□ -1.23
SYNPO2-201ENST00000307142 TYMSOSQ8TAI1 123 aa7.35□□□□□ -1.23
SYNPO2-201ENST00000307142 URB1-AS1Q96HZ7 61 aa7.34□□□□□ -1.23
SYNPO2-201ENST00000307142 C6orf48Q9UBA6 75 aa7.34□□□□□ -1.23
SYNPO2-201ENST00000307142 LINC00167Q96N53 147 aa7.34□□□□□ -1.24
SYNPO2-201ENST00000307142 RANBP2P49792 3224 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms