RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 PLEKHB2Q96CS7 222 aa6.57□□□□□ -1.36
SMIM4-201ENST00000307106 TMEM141Q96I45 108 aa6.57□□□□□ -1.36
SMIM4-201ENST00000307106 IGLV5-37A0A075B6J1 123 aa6.56□□□□□ -1.36
SMIM4-201ENST00000307106 LINC00862A6NCI5 91 aa6.56□□□□□ -1.36
SMIM4-201ENST00000307106 HMSDA8MTL9 139 aa6.56□□□□□ -1.36
SMIM4-201ENST00000307106 FAM104BQ5XKR9 115 aa6.56□□□□□ -1.36
SMIM4-201ENST00000307106 TEX43Q6ZNM6 134 aa6.56□□□□□ -1.36
SMIM4-201ENST00000307106 PYGO1Q9Y3Y4 419 aa6.56□□□□□ -1.36
SMIM4-201ENST00000307106 M0R2T5 61 aa6.55□□□□□ -1.36
SMIM4-201ENST00000307106 CKS2P33552 79 aa6.55□□□□□ -1.36
SMIM4-201ENST00000307106 Q8NBF4 154 aa6.55□□□□□ -1.36
SMIM4-201ENST00000307106 C2orf88Q9BSF0 95 aa6.55□□□□□ -1.36
SMIM4-201ENST00000307106 EIF5A2Q9GZV4 153 aaKnown RBP6.55□□□□□ -1.36
SMIM4-201ENST00000307106 NDUFA12Q9UI09 145 aa6.55□□□□□ -1.36
SMIM4-201ENST00000307106 SCO1O75880 301 aa6.54□□□□□ -1.36
SMIM4-201ENST00000307106 SPINK1P00995 79 aa6.53□□□□□ -1.36
SMIM4-201ENST00000307106 ZC2HC1BQ5TFG8 222 aa6.53□□□□□ -1.36
SMIM4-201ENST00000307106 CBLN2Q8IUK8 224 aa6.53□□□□□ -1.36
SMIM4-201ENST00000307106 TMEM126AQ9H061 195 aa6.53□□□□□ -1.36
SMIM4-201ENST00000307106 TMEM238C9JI98 176 aa6.52□□□□□ -1.37
SMIM4-201ENST00000307106 TMEM250H0YL14 139 aa6.52□□□□□ -1.37
SMIM4-201ENST00000307106 NPYP01303 97 aa6.52□□□□□ -1.37
SMIM4-201ENST00000307106 CXCL5P42830 114 aa6.52□□□□□ -1.37
SMIM4-201ENST00000307106 HIGD2AQ9BW72 106 aa6.52□□□□□ -1.37
SMIM4-201ENST00000307106 GNB1LQ9BYB4 327 aa6.52□□□□□ -1.37
SMIM4-201ENST00000307106 OSTCQ9NRP0 149 aa6.52□□□□□ -1.37
SMIM4-201ENST00000307106 IGLV8-61A0A075B6I0 122 aa6.51□□□□□ -1.37
SMIM4-201ENST00000307106 D6R8Y8 96 aa6.51□□□□□ -1.37
SMIM4-201ENST00000307106 RAB5AP20339 215 aa6.51□□□□□ -1.37
SMIM4-201ENST00000307106 CEBPGP53567 150 aa6.51□□□□□ -1.37
SMIM4-201ENST00000307106 LINC01551Q86U37 167 aa6.51□□□□□ -1.37
SMIM4-201ENST00000307106 SPRR4Q96PI1 79 aa6.51□□□□□ -1.37
SMIM4-201ENST00000307106 FAM19A2Q8N3H0 131 aa6.5□□□□□ -1.37
SMIM4-201ENST00000307106 AMELXQ99217 191 aa6.5□□□□□ -1.37
SMIM4-201ENST00000307106 CDKN2A-AS1Q9UH64 79 aa6.5□□□□□ -1.37
SMIM4-201ENST00000307106 NAT8BQ9UHF3 227 aa6.5□□□□□ -1.37
SMIM4-201ENST00000307106 V9GYV3 84 aa6.5□□□□□ -1.37
SMIM4-201ENST00000307106 M0R378 163 aa6.49□□□□□ -1.37
SMIM4-201ENST00000307106 RAB5BP61020 215 aa6.49□□□□□ -1.37
SMIM4-201ENST00000307106 PCOTHQ58A44 107 aa6.49□□□□□ -1.37
SMIM4-201ENST00000307106 FAM19A3Q7Z5A8 133 aa6.49□□□□□ -1.37
SMIM4-201ENST00000307106 Q8N377 158 aa6.49□□□□□ -1.37
SMIM4-201ENST00000307106 VCX2Q9H322 139 aa6.49□□□□□ -1.37
SMIM4-201ENST00000307106 FLGP20930 4061 aaPredicted RBP6.49□□□□□ -1.37
SMIM4-201ENST00000307106 HERVK_113P63121 156 aa6.48□□□□□ -1.37
SMIM4-201ENST00000307106 C2orf66Q6UXQ4 117 aa6.48□□□□□ -1.37
SMIM4-201ENST00000307106 SMIM7Q9BQ49 75 aa6.47□□□□□ -1.37
SMIM4-201ENST00000307106 ZNF706Q9Y5V0 76 aaPredicted RBP6.47□□□□□ -1.37
SMIM4-201ENST00000307106 SSPOA2VEC9 5147 aa6.47□□□□□ -1.37
SMIM4-201ENST00000307106 RPS29P62273 56 aaKnown RBP6.46□□□□□ -1.38
SMIM4-201ENST00000307106 SEC11AP67812 179 aa6.46□□□□□ -1.38
SMIM4-201ENST00000307106 FAM74A3Q4VXF1 159 aa6.46□□□□□ -1.38
SMIM4-201ENST00000307106 GEMIN7Q9H840 131 aaKnown RBP6.46□□□□□ -1.38
SMIM4-201ENST00000307106 CYSLTR1Q9Y271 337 aa6.46□□□□□ -1.38
SMIM4-201ENST00000307106 A0A1B0GW15 77 aa6.45□□□□□ -1.38
SMIM4-201ENST00000307106 SLC25A20O43772 301 aa6.45□□□□□ -1.38
SMIM4-201ENST00000307106 PPBPP02775 128 aa6.45□□□□□ -1.38
SMIM4-201ENST00000307106 COX7B2Q8TF08 81 aa6.45□□□□□ -1.38
SMIM4-201ENST00000307106 USH2AO75445 5202 aa6.44□□□□□ -1.38
SMIM4-201ENST00000307106 SMIM1B2RUZ4 78 aa6.44□□□□□ -1.38
SMIM4-201ENST00000307106 F8W036 122 aa6.44□□□□□ -1.38
SMIM4-201ENST00000307106 VPREB1P12018 145 aa6.44□□□□□ -1.38
SMIM4-201ENST00000307106 NPSP0C0P6 89 aa6.43□□□□□ -1.38
SMIM4-201ENST00000307106 ORMDL3Q8N138 153 aa6.43□□□□□ -1.38
SMIM4-201ENST00000307106 LOC389332A0A1B0GUA5 103 aa6.42□□□□□ -1.38
SMIM4-201ENST00000307106 SMIM27A0A1W2PRY6 76 aa6.42□□□□□ -1.38
SMIM4-201ENST00000307106 IGIPA6NJ69 53 aa6.42□□□□□ -1.38
SMIM4-201ENST00000307106 S100A8P05109 93 aa6.42□□□□□ -1.38
SMIM4-201ENST00000307106 PDZD11Q5EBL8 140 aa6.42□□□□□ -1.38
SMIM4-201ENST00000307106 MRPL54Q6P161 138 aaKnown RBP6.42□□□□□ -1.38
SMIM4-201ENST00000307106 COX6B2Q6YFQ2 88 aa6.42□□□□□ -1.38
SMIM4-201ENST00000307106 PRELID3AQ96N28 172 aa6.42□□□□□ -1.38
SMIM4-201ENST00000307106 RPL24P83731 157 aaKnown RBP6.41□□□□□ -1.38
SMIM4-201ENST00000307106 TMEM136Q6ZRR5 245 aa6.41□□□□□ -1.38
SMIM4-201ENST00000307106 BATF3Q9NR55 127 aa6.41□□□□□ -1.38
SMIM4-201ENST00000307106 PFN2P35080 140 aa6.4□□□□□ -1.38
SMIM4-201ENST00000307106 MOBPQ13875 183 aa6.4□□□□□ -1.38
SMIM4-201ENST00000307106 SND1-IT1Q9HBX3 110 aa6.4□□□□□ -1.38
SMIM4-201ENST00000307106 A0A1B0GXF2 115 aa6.39□□□□□ -1.39
SMIM4-201ENST00000307106 PRSS47A8MTI9 375 aa6.39□□□□□ -1.39
SMIM4-201ENST00000307106 ATP5LO75964 103 aa6.39□□□□□ -1.39
SMIM4-201ENST00000307106 RAB14P61106 215 aa6.39□□□□□ -1.39
SMIM4-201ENST00000307106 PAPPA-AS1Q5QFB9 102 aa6.39□□□□□ -1.39
SMIM4-201ENST00000307106 SLC51BQ86UW2 128 aa6.39□□□□□ -1.39
SMIM4-201ENST00000307106 MAP1LC3AQ9H492 121 aa6.39□□□□□ -1.39
SMIM4-201ENST00000307106 IGLV9-49A0A0B4J1Y8 123 aa6.38□□□□□ -1.39
SMIM4-201ENST00000307106 ORMDL2Q53FV1 153 aa6.38□□□□□ -1.39
SMIM4-201ENST00000307106 LINC00483Q53H64 154 aa6.38□□□□□ -1.39
SMIM4-201ENST00000307106 AKAP14Q86UN6 197 aa6.38□□□□□ -1.39
SMIM4-201ENST00000307106 Q8N8P6 123 aa6.38□□□□□ -1.39
SMIM4-201ENST00000307106 Q8NDZ9 215 aa6.38□□□□□ -1.39
SMIM4-201ENST00000307106 SMCR5Q8TEV8 140 aa6.38□□□□□ -1.39
SMIM4-201ENST00000307106 FCGBPQ9Y6R7 5405 aaPredicted RBP6.38□□□□□ -1.39
SMIM4-201ENST00000307106 SYNE2Q8WXH0 6885 aaKnown RBP6.37□□□□□ -1.39
SMIM4-201ENST00000307106 SPINK8P0C7L1 97 aa6.37□□□□□ -1.39
SMIM4-201ENST00000307106 RPL23P62829 140 aaKnown RBP6.37□□□□□ -1.39
SMIM4-201ENST00000307106 RGS21Q2M5E4 152 aa6.37□□□□□ -1.39
SMIM4-201ENST00000307106 SSBP3-AS1Q7Z2R9 100 aa6.37□□□□□ -1.39
SMIM4-201ENST00000307106 IGLV5-45A0A087WSX0 123 aa6.36□□□□□ -1.39
SMIM4-201ENST00000307106 TINCRA0A1B0GVN0 87 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms