RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 IGLV4-60A0A075B6I1 120 aa9.63□□□□□ -0.87
KARS-201ENST00000302445 C18orf65Q6ZTR6 163 aa9.63□□□□□ -0.87
KARS-201ENST00000302445 LINC00959A0A1B0GUT2 108 aa9.63□□□□□ -0.87
KARS-201ENST00000302445 PRB1P04280 392 aa9.63□□□□□ -0.87
KARS-201ENST00000302445 FAM19A1Q7Z5A9 133 aa9.62□□□□□ -0.87
KARS-201ENST00000302445 C20orf197Q8N268 126 aa9.62□□□□□ -0.87
KARS-201ENST00000302445 NOP10Q9NPE3 64 aaKnown RBP9.62□□□□□ -0.87
KARS-201ENST00000302445 CFAP46Q8IYW2 2715 aa9.62□□□□□ -0.87
KARS-201ENST00000302445 PDE6GP18545 87 aa9.61□□□□□ -0.87
KARS-201ENST00000302445 HRCT1Q6UXD1 115 aa9.61□□□□□ -0.87
KARS-201ENST00000302445 MUC7Q8TAX7 377 aa9.61□□□□□ -0.87
KARS-201ENST00000302445 TRGV2A0A075B6R0 118 aa9.61□□□□□ -0.87
KARS-201ENST00000302445 A0A096LNT2 108 aa9.61□□□□□ -0.87
KARS-201ENST00000302445 PLAC8L1A1L4L8 177 aa9.61□□□□□ -0.87
KARS-201ENST00000302445 H7BZZ5 65 aa9.61□□□□□ -0.87
KARS-201ENST00000302445 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.61□□□□□ -0.872e-7■■■■□ 24.3
KARS-201ENST00000302445 HIVEP3Q5T1R4 2406 aa9.6□□□□□ -0.87
KARS-201ENST00000302445 ZNF561-AS1K7EIQ3 104 aa9.6□□□□□ -0.87
KARS-201ENST00000302445 Q6ZQT0 140 aa9.6□□□□□ -0.87
KARS-201ENST00000302445 LINC00482Q8N8I6 264 aa9.6□□□□□ -0.87
KARS-201ENST00000302445 RELNP78509 3460 aa9.6□□□□□ -0.87
KARS-201ENST00000302445 TRGV4A0A0C4DH28 118 aa9.6□□□□□ -0.87
KARS-201ENST00000302445 A0A1B0GUV1 79 aa9.6□□□□□ -0.87
KARS-201ENST00000302445 C6orf223Q8N319 242 aa9.6□□□□□ -0.87
KARS-201ENST00000302445 COL12A1Q99715 3063 aa9.59□□□□□ -0.87
KARS-201ENST00000302445 SPTA1P02549 2419 aa9.59□□□□□ -0.87
KARS-201ENST00000302445 NDUFC1O43677 76 aa9.59□□□□□ -0.87
KARS-201ENST00000302445 ATP5EP56381 51 aaPredicted RBP9.59□□□□□ -0.87
KARS-201ENST00000302445 CXCL6P80162 114 aa9.59□□□□□ -0.87
KARS-201ENST00000302445 IGKV3OR2-268A0A0C4DH90 116 aa9.58□□□□□ -0.88
KARS-201ENST00000302445 RBM3P98179 157 aaKnown RBP9.58□□□□□ -0.88
KARS-201ENST00000302445 IGHV4-28A0A0C4DH34 117 aa9.58□□□□□ -0.88
KARS-201ENST00000302445 LOC100131303A0A0U1RQF7 123 aa9.58□□□□□ -0.88
KARS-201ENST00000302445 BAHCC1Q9P281 2608 aa9.58□□□□□ -0.88
KARS-201ENST00000302445 C9orf66Q5T8R8 295 aa9.57□□□□□ -0.88
KARS-201ENST00000302445 LINC00575Q6W349 94 aa9.57□□□□□ -0.88
KARS-201ENST00000302445 WFDC9Q8NEX5 89 aa9.57□□□□□ -0.88
KARS-201ENST00000302445 CELSR1Q9NYQ6 3014 aa9.57□□□□□ -0.88
KARS-201ENST00000302445 GNLYP22749 145 aa9.56□□□□□ -0.88
KARS-201ENST00000302445 PRO0628Q9UI54 55 aa9.56□□□□□ -0.88
KARS-201ENST00000302445 LINC01547P58512 204 aaPredicted RBP9.55□□□□□ -0.88
KARS-201ENST00000302445 ZNF462Q96JM2 2506 aa9.55□□□□□ -0.88
KARS-201ENST00000302445 SMIM26A0A096LP01 95 aa9.55□□□□□ -0.88
KARS-201ENST00000302445 LORP23490 312 aaPredicted RBP9.55□□□□□ -0.88
KARS-201ENST00000302445 GCN1Q92616 2671 aaKnown RBP9.54□□□□□ -0.88
KARS-201ENST00000302445 GIG44P09565 113 aaPredicted RBP9.54□□□□□ -0.88
KARS-201ENST00000302445 KHDC1LQ5JSQ8 128 aa9.54□□□□□ -0.88
KARS-201ENST00000302445 HELZ2Q9BYK8 2649 aaKnown RBP9.54□□□□□ -0.88
KARS-201ENST00000302445 C6orf99Q4VX62 202 aa9.53□□□□□ -0.88
KARS-201ENST00000302445 Q6ZVQ6 151 aa9.53□□□□□ -0.88
KARS-201ENST00000302445 KIAA0087Q14695 138 aa9.52□□□□□ -0.89
KARS-201ENST00000302445 C11orf68Q9H3H3 251 aaKnown RBP9.51□□□□□ -0.89
KARS-201ENST00000302445 CD164L2Q6UWJ8 174 aa9.51□□□□□ -0.89
KARS-201ENST00000302445 CSNK1G2-AS1Q8NCQ2 148 aa9.51□□□□□ -0.89
KARS-201ENST00000302445 AKAP6Q13023 2319 aa9.5□□□□□ -0.89
KARS-201ENST00000302445 ERC2-IT1O76042 136 aa9.5□□□□□ -0.89
KARS-201ENST00000302445 LINC00612Q8N6U2 182 aa9.49□□□□□ -0.89
KARS-201ENST00000302445 ZNF843Q8N446 348 aa9.49□□□□□ -0.89
KARS-201ENST00000302445 LAMTOR3Q9UHA4 124 aa9.49□□□□□ -0.89
KARS-201ENST00000302445 NBASA2RRP1 2371 aa9.48□□□□□ -0.89
KARS-201ENST00000302445 TENM4Q6N022 2769 aa9.48□□□□□ -0.89
KARS-201ENST00000302445 PLA2G2AP14555 144 aa9.48□□□□□ -0.89
KARS-201ENST00000302445 IGHV4-31P0DP07 118 aa9.47□□□□□ -0.89
KARS-201ENST00000302445 PRR3P79522 188 aaKnown RBP9.47□□□□□ -0.89
KARS-201ENST00000302445 HAMPP81172 84 aa9.47□□□□□ -0.89
KARS-201ENST00000302445 FLNBO75369 2602 aaKnown RBP9.47□□□□□ -0.89
KARS-201ENST00000302445 TRBV7-4A0A0J9YYF1 115 aa9.46□□□□□ -0.89
KARS-201ENST00000302445 CCL24O00175 119 aa9.46□□□□□ -0.89
KARS-201ENST00000302445 IGLV6-57P01721 117 aa9.46□□□□□ -0.89
KARS-201ENST00000302445 F8WEM9 126 aa9.46□□□□□ -0.9
KARS-201ENST00000302445 C16orf95Q9H693 158 aa9.46□□□□□ -0.9
KARS-201ENST00000302445 TRAV10A0A0B4J240 114 aa9.44□□□□□ -0.9
KARS-201ENST00000302445 RNASE1P07998 156 aaKnown RBP9.44□□□□□ -0.9
KARS-201ENST00000302445 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.44□□□□□ -0.9
KARS-201ENST00000302445 C19orf73Q9NVV2 129 aa9.44□□□□□ -0.9
KARS-201ENST00000302445 LINC00336Q6ZUF6 198 aa9.44□□□□□ -0.9
KARS-201ENST00000302445 Q8N3U1 123 aa9.44□□□□□ -0.9
KARS-201ENST00000302445 RMI2Q96E14 147 aa9.44□□□□□ -0.9
KARS-201ENST00000302445 CSPG4Q6UVK1 2322 aa9.44□□□□□ -0.9
KARS-201ENST00000302445 SETXQ7Z333 2677 aaKnown RBP9.44□□□□□ -0.9
KARS-201ENST00000302445 GYPEP15421 78 aa9.43□□□□□ -0.9
KARS-201ENST00000302445 FP248Q71RG6 208 aaPredicted RBP9.43□□□□□ -0.9
KARS-201ENST00000302445 A0A0J9YWU9 116 aa9.43□□□□□ -0.9
KARS-201ENST00000302445 TRBV7-6A0A0J9YX20 115 aa9.43□□□□□ -0.9
KARS-201ENST00000302445 IGHV4-30-4P0DP06 118 aa9.43□□□□□ -0.9
KARS-201ENST00000302445 MIFP14174 115 aa9.42□□□□□ -0.9
KARS-201ENST00000302445 CHCHD10Q8WYQ3 142 aaPredicted RBP9.42□□□□□ -0.9
KARS-201ENST00000302445 PRO0255Q9UI72 69 aa9.42□□□□□ -0.9
KARS-201ENST00000302445 VPS13CQ709C8 3753 aa9.41□□□□□ -0.9
KARS-201ENST00000302445 M0R2N4 97 aa9.41□□□□□ -0.9
KARS-201ENST00000302445 Q6ZQY7 126 aa9.41□□□□□ -0.9
KARS-201ENST00000302445 Q8NDZ9 215 aa9.41□□□□□ -0.9
KARS-201ENST00000302445 SNURFQ9Y675 71 aa9.41□□□□□ -0.9
KARS-201ENST00000302445 CREBBPQ92793 2442 aa9.41□□□□□ -0.9
KARS-201ENST00000302445 CR1P17927 2039 aa9.41□□□□□ -0.9
KARS-201ENST00000302445 IGLV1-51P01701 117 aa9.41□□□□□ -0.9
KARS-201ENST00000302445 SPATA3Q8NHX4 192 aa9.41□□□□□ -0.9
KARS-201ENST00000302445 RPL35AP18077 110 aaKnown RBP9.4□□□□□ -0.9
KARS-201ENST00000302445 CRYBG3Q68DQ2 2970 aa9.4□□□□□ -0.9
KARS-201ENST00000302445 GVQW2A0A096LPI5 108 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms