RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 C2orf82Q6UX34 121 aa11.64□□□□□ -0.55
TMED3-201ENST00000299705 TRBV30A0A0K0K1B3 111 aa11.63□□□□□ -0.55
TMED3-201ENST00000299705 E9PLD3 99 aa11.63□□□□□ -0.55
TMED3-201ENST00000299705 SCGB1D1O95968 90 aa11.63□□□□□ -0.55
TMED3-201ENST00000299705 GCSHP23434 173 aa11.63□□□□□ -0.55
TMED3-201ENST00000299705 C10orf25Q5T742 122 aa11.63□□□□□ -0.55
TMED3-201ENST00000299705 SFTA2Q6UW10 78 aa11.63□□□□□ -0.55
TMED3-201ENST00000299705 PLEKHB2Q96CS7 222 aa11.63□□□□□ -0.55
TMED3-201ENST00000299705 EPPK1P58107 5090 aaKnown RBP11.63□□□□□ -0.55
TMED3-201ENST00000299705 ATOH7Q8N100 152 aa11.63□□□□□ -0.55
TMED3-201ENST00000299705 STPG4Q8N801 248 aa11.63□□□□□ -0.55
TMED3-201ENST00000299705 C16orf90A8MZG2 172 aa11.62□□□□□ -0.55
TMED3-201ENST00000299705 C6orf48Q9UBA6 75 aa11.62□□□□□ -0.55
TMED3-201ENST00000299705 JOSD1Q15040 202 aaPredicted RBP11.61□□□□□ -0.55
TMED3-201ENST00000299705 J3QQQ9 107 aa11.6□□□□□ -0.55
TMED3-201ENST00000299705 LINC01620Q4KN68 170 aa11.6□□□□□ -0.55
TMED3-201ENST00000299705 ZNF625Q96I27 306 aaPredicted RBP11.6□□□□□ -0.55
TMED3-201ENST00000299705 PKIGQ9Y2B9 76 aa11.6□□□□□ -0.55
TMED3-201ENST00000299705 LOC105371267A0A1B0GV96 52 aa11.59□□□□□ -0.55
TMED3-201ENST00000299705 SDIM1Q6ZPB5 146 aa11.59□□□□□ -0.55
TMED3-201ENST00000299705 HECTD4Q9Y4D8 3996 aa11.59□□□□□ -0.55
TMED3-201ENST00000299705 TSPEAR-AS2P59090 65 aa11.58□□□□□ -0.56
TMED3-201ENST00000299705 TLX1NBP0CAT3 122 aa11.57□□□□□ -0.56
TMED3-201ENST00000299705 LGALS3P17931 250 aaKnown RBP11.57□□□□□ -0.56
TMED3-201ENST00000299705 NMUP48645 174 aa11.57□□□□□ -0.56
TMED3-201ENST00000299705 NDUFA12Q9UI09 145 aa11.57□□□□□ -0.56
TMED3-201ENST00000299705 LOC107984640A0A0U1RRK4 108 aa11.57□□□□□ -0.56
TMED3-201ENST00000299705 KRTAP10-1P60331 282 aa11.57□□□□□ -0.56
TMED3-201ENST00000299705 BIRC6Q9NR09 4857 aa11.56□□□□□ -0.56
TMED3-201ENST00000299705 MYMXA0A1B0GTQ4 84 aa11.56□□□□□ -0.56
TMED3-201ENST00000299705 HSBP1L1C9JCN9 74 aa11.56□□□□□ -0.56
TMED3-201ENST00000299705 HERV-K104P63124 156 aa11.56□□□□□ -0.56
TMED3-201ENST00000299705 ANKRD39Q53RE8 183 aa11.56□□□□□ -0.56
TMED3-201ENST00000299705 IGKV2D-26A0A0A0MRZ7 120 aa11.55□□□□□ -0.56
TMED3-201ENST00000299705 MAJINQ3KP22 176 aa11.55□□□□□ -0.56
TMED3-201ENST00000299705 C9orf116Q5BN46 136 aaPredicted RBP11.55□□□□□ -0.56
TMED3-201ENST00000299705 PYY3Q5JQD4 70 aa11.54□□□□□ -0.56
TMED3-201ENST00000299705 NDUFC2-KCTD14E9PQ53 114 aa11.53□□□□□ -0.56
TMED3-201ENST00000299705 COX17Q14061 63 aa11.53□□□□□ -0.56
TMED3-201ENST00000299705 DNAH5Q8TE73 4624 aa11.53□□□□□ -0.56
TMED3-201ENST00000299705 ERG28Q9UKR5 140 aa11.52□□□□□ -0.56
TMED3-201ENST00000299705 PKHD1P08F94 4074 aa11.52□□□□□ -0.57
TMED3-201ENST00000299705 LINC00587B1AMM8 73 aa11.51□□□□□ -0.57
TMED3-201ENST00000299705 Q6ZSA8 131 aa11.51□□□□□ -0.57
TMED3-201ENST00000299705 A0A096LNI7 61 aa11.51□□□□□ -0.57
TMED3-201ENST00000299705 PTTG1IPP53801 180 aa11.51□□□□□ -0.57
TMED3-201ENST00000299705 RPL18AQ02543 176 aaKnown RBP11.51□□□□□ -0.57
TMED3-201ENST00000299705 Q6ZRP5 223 aa11.51□□□□□ -0.57
TMED3-201ENST00000299705 LINC00474Q9P2X8 69 aa11.51□□□□□ -0.57
TMED3-201ENST00000299705 GAGE2BQ13066 116 aa11.5□□□□□ -0.57
TMED3-201ENST00000299705 CIRBPQ14011 172 aaKnown RBP11.5□□□□□ -0.57
TMED3-201ENST00000299705 ZNF815PA8K554 130 aa11.49□□□□□ -0.57
TMED3-201ENST00000299705 FAM30AQ9NZY2 134 aa11.49□□□□□ -0.57
TMED3-201ENST00000299705 PFN2P35080 140 aa11.48□□□□□ -0.57
TMED3-201ENST00000299705 VAMP8Q9BV40 100 aa11.48□□□□□ -0.57
TMED3-201ENST00000299705 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.48□□□□□ -0.57
TMED3-201ENST00000299705 IGKV2-24A0A0C4DH68 120 aa11.47□□□□□ -0.57
TMED3-201ENST00000299705 CHTF8P0CG12 524 aa11.47□□□□□ -0.57
TMED3-201ENST00000299705 GAGE2EQ4V326 116 aa11.47□□□□□ -0.57
TMED3-201ENST00000299705 MEIG1Q5JSS6 88 aa11.47□□□□□ -0.57
TMED3-201ENST00000299705 SPACA4Q8TDM5 124 aa11.47□□□□□ -0.57
TMED3-201ENST00000299705 TTTY13Q9BZ97 58 aa11.47□□□□□ -0.57
TMED3-201ENST00000299705 GAGE2DQ9UEU5 116 aa11.47□□□□□ -0.57
TMED3-201ENST00000299705 A0A0J9YXY3 114 aa11.46□□□□□ -0.57
TMED3-201ENST00000299705 PANO1I0J062 215 aa11.46□□□□□ -0.57
TMED3-201ENST00000299705 PCP2Q8IVA1 136 aa11.46□□□□□ -0.57
TMED3-201ENST00000299705 DYNC1H1Q14204 4646 aaKnown RBP11.46□□□□□ -0.57
TMED3-201ENST00000299705 SMIM13P0DJ93 91 aa11.45□□□□□ -0.58
TMED3-201ENST00000299705 LINC00158P58513 81 aa11.45□□□□□ -0.58
TMED3-201ENST00000299705 SPATA45Q537H7 98 aa11.44□□□□□ -0.58
TMED3-201ENST00000299705 PAM16Q9Y3D7 125 aa11.44□□□□□ -0.58
TMED3-201ENST00000299705 TIMM17BO60830 172 aa11.43□□□□□ -0.58
TMED3-201ENST00000299705 DPH3Q96FX2 82 aa11.43□□□□□ -0.58
TMED3-201ENST00000299705 LRP1BQ9NZR2 4599 aa11.43□□□□□ -0.58
TMED3-201ENST00000299705 A0A0U1RRA0 63 aa11.42□□□□□ -0.58
TMED3-201ENST00000299705 CDK2AP2O75956 126 aa11.42□□□□□ -0.58
TMED3-201ENST00000299705 C9orf129Q5T035 196 aaKnown RBP11.42□□□□□ -0.58
TMED3-201ENST00000299705 XAGE1AQ9HD64 81 aa11.42□□□□□ -0.58
TMED3-201ENST00000299705 A0A087WYN8 130 aa11.41□□□□□ -0.58
TMED3-201ENST00000299705 COX8AP10176 69 aa11.41□□□□□ -0.58
TMED3-201ENST00000299705 SCGB1D4Q6XE38 83 aa11.41□□□□□ -0.58
TMED3-201ENST00000299705 SND1-IT1Q9HBX3 110 aa11.41□□□□□ -0.58
TMED3-201ENST00000299705 EPM2AB3EWF7 344 aa11.4□□□□□ -0.58
TMED3-201ENST00000299705 XGP55808 180 aa11.4□□□□□ -0.58
TMED3-201ENST00000299705 BOD1L2Q8IYS8 172 aa11.4□□□□□ -0.58
TMED3-201ENST00000299705 MIR7-3HGQ8N6C7 128 aa11.4□□□□□ -0.58
TMED3-201ENST00000299705 CIRBP-AS1Q8TBR5 109 aa11.4□□□□□ -0.58
TMED3-201ENST00000299705 PLAC8Q9NZF1 115 aa11.4□□□□□ -0.58
TMED3-201ENST00000299705 SMIM6P0DI80 62 aa11.39□□□□□ -0.59
TMED3-201ENST00000299705 SCXQ7RTU7 201 aa11.39□□□□□ -0.59
TMED3-201ENST00000299705 LITAFQ99732 161 aa11.39□□□□□ -0.59
TMED3-201ENST00000299705 DLEU1O43261 78 aa11.38□□□□□ -0.59
TMED3-201ENST00000299705 S100A12P80511 92 aa11.38□□□□□ -0.59
TMED3-201ENST00000299705 A0A1W2PNN7 141 aa11.38□□□□□ -0.59
TMED3-201ENST00000299705 ADAMTSL4-AS1Q5T5F5 129 aa11.38□□□□□ -0.59
TMED3-201ENST00000299705 PLA2G2DQ9UNK4 145 aa11.38□□□□□ -0.59
TMED3-201ENST00000299705 DNAH8Q96JB1 4490 aa11.37□□□□□ -0.59
TMED3-201ENST00000299705 LOC107984156A0A0G2JMH3 177 aa11.37□□□□□ -0.59
TMED3-201ENST00000299705 ARL17AQ8IVW1 177 aa11.37□□□□□ -0.59
TMED3-201ENST00000299705 C14orf144Q96I85 54 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms