RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 ODF1Q14990 250 aa8.46□□□□□ -1.05
TMEM41B-201ENST00000299596 KIAA1644Q3SXP7 199 aa8.46□□□□□ -1.05
TMEM41B-201ENST00000299596 Q8IZM0 81 aa8.46□□□□□ -1.05
TMEM41B-201ENST00000299596 ALKBH7Q9BT30 221 aaPredicted RBP8.46□□□□□ -1.05
TMEM41B-201ENST00000299596 TOMM7Q9P0U1 55 aa8.46□□□□□ -1.05
TMEM41B-201ENST00000299596 UBE2BP63146 152 aa8.46□□□□□ -1.06
TMEM41B-201ENST00000299596 ERASQ7Z444 233 aa8.46□□□□□ -1.06
TMEM41B-201ENST00000299596 KRTAP11-1Q8IUC1 163 aa8.46□□□□□ -1.06
TMEM41B-201ENST00000299596 KRTAP7-1Q8IUC3 87 aa8.46□□□□□ -1.06
TMEM41B-201ENST00000299596 GEMIN7Q9H840 131 aaKnown RBP8.46□□□□□ -1.06
TMEM41B-201ENST00000299596 LINC01549A6NIU2 74 aa8.45□□□□□ -1.06
TMEM41B-201ENST00000299596 S100PP25815 95 aa8.45□□□□□ -1.06
TMEM41B-201ENST00000299596 C9orf129Q5T035 196 aaKnown RBP8.45□□□□□ -1.06
TMEM41B-201ENST00000299596 GNB1LQ9BYB4 327 aa8.45□□□□□ -1.06
TMEM41B-201ENST00000299596 CDKN2A-AS1Q9UH64 79 aa8.45□□□□□ -1.06
TMEM41B-201ENST00000299596 SCGB3A1Q96QR1 104 aa8.44□□□□□ -1.06
TMEM41B-201ENST00000299596 SEC11CQ9BY50 192 aa8.44□□□□□ -1.06
TMEM41B-201ENST00000299596 H0Y9J4 135 aa8.43□□□□□ -1.06
TMEM41B-201ENST00000299596 F8VRH5 84 aa8.42□□□□□ -1.06
TMEM41B-201ENST00000299596 CXCL5P42830 114 aa8.42□□□□□ -1.06
TMEM41B-201ENST00000299596 IFITM2Q01629 132 aa8.42□□□□□ -1.06
TMEM41B-201ENST00000299596 COX19Q49B96 90 aa8.42□□□□□ -1.06
TMEM41B-201ENST00000299596 LINC01546A6NGU7 62 aa8.41□□□□□ -1.06
TMEM41B-201ENST00000299596 LINC00469Q8N7U9 141 aa8.41□□□□□ -1.06
TMEM41B-201ENST00000299596 TINCRA0A1B0GVN0 87 aa8.4□□□□□ -1.06
TMEM41B-201ENST00000299596 LBHQ53QV2 105 aaPredicted RBP8.4□□□□□ -1.06
TMEM41B-201ENST00000299596 PDZD11Q5EBL8 140 aa8.39□□□□□ -1.07
TMEM41B-201ENST00000299596 PRR26Q8N8Z3 221 aa8.39□□□□□ -1.07
TMEM41B-201ENST00000299596 XAGE1AQ9HD64 81 aa8.39□□□□□ -1.07
TMEM41B-201ENST00000299596 C22orf24Q9Y442 160 aa8.39□□□□□ -1.07
TMEM41B-201ENST00000299596 IGLV1-50A0A075B6I6 118 aa8.38□□□□□ -1.07
TMEM41B-201ENST00000299596 SMIM1B2RUZ4 78 aa8.38□□□□□ -1.07
TMEM41B-201ENST00000299596 LORP23490 312 aaPredicted RBP8.38□□□□□ -1.07
TMEM41B-201ENST00000299596 CST9LQ9H4G1 147 aa8.38□□□□□ -1.07
TMEM41B-201ENST00000299596 IGLV5-45A0A087WSX0 123 aa8.37□□□□□ -1.07
TMEM41B-201ENST00000299596 NUPR1O60356 82 aa8.37□□□□□ -1.07
TMEM41B-201ENST00000299596 FABP9Q0Z7S8 132 aa8.37□□□□□ -1.07
TMEM41B-201ENST00000299596 PMVKQ15126 192 aa8.37□□□□□ -1.07
TMEM41B-201ENST00000299596 FA2HQ7L5A8 372 aa8.37□□□□□ -1.07
TMEM41B-201ENST00000299596 COX7B2Q8TF08 81 aa8.37□□□□□ -1.07
TMEM41B-201ENST00000299596 MRPL18Q9H0U6 180 aaKnown RBP8.37□□□□□ -1.07
TMEM41B-201ENST00000299596 SMCO4Q9NRQ5 59 aa8.37□□□□□ -1.07
TMEM41B-201ENST00000299596 RNF213Q63HN8 5207 aa8.37□□□□□ -1.07
TMEM41B-201ENST00000299596 COMMD7Q86VX2 200 aa8.37□□□□□ -1.07
TMEM41B-201ENST00000299596 TP73-AS1Q9UF72 201 aa8.37□□□□□ -1.07
TMEM41B-201ENST00000299596 ZNF861PO60384 105 aa8.36□□□□□ -1.07
TMEM41B-201ENST00000299596 KRTAP1-4P0C5Y4 121 aa8.36□□□□□ -1.07
TMEM41B-201ENST00000299596 RHEBQ15382 184 aa8.36□□□□□ -1.07
TMEM41B-201ENST00000299596 C10orf91Q5T1B1 145 aa8.36□□□□□ -1.07
TMEM41B-201ENST00000299596 MRPL55Q7Z7F7 128 aaKnown RBP8.35□□□□□ -1.07
TMEM41B-201ENST00000299596 RPS10P5Q9NQ39 176 aa8.35□□□□□ -1.07
TMEM41B-201ENST00000299596 H3BRM9 83 aa8.34□□□□□ -1.07
TMEM41B-201ENST00000299596 RPL13AP40429 203 aaKnown RBP8.34□□□□□ -1.07
TMEM41B-201ENST00000299596 CARHSP1Q9Y2V2 147 aaKnown RBP8.34□□□□□ -1.07
TMEM41B-201ENST00000299596 SPINK8P0C7L1 97 aa8.33□□□□□ -1.08
TMEM41B-201ENST00000299596 C4orf48Q5BLP8 95 aa8.33□□□□□ -1.08
TMEM41B-201ENST00000299596 RAB5BP61020 215 aa8.31□□□□□ -1.08
TMEM41B-201ENST00000299596 ATP5LO75964 103 aa8.3□□□□□ -1.08
TMEM41B-201ENST00000299596 LINC00614P0C842 121 aa8.3□□□□□ -1.08
TMEM41B-201ENST00000299596 RPL28P46779 137 aaKnown RBP8.3□□□□□ -1.08
TMEM41B-201ENST00000299596 LINC00167Q96N53 147 aa8.3□□□□□ -1.08
TMEM41B-201ENST00000299596 TRAPPC1Q9Y5R8 145 aa8.3□□□□□ -1.08
TMEM41B-201ENST00000299596 BCE1O60756 84 aa8.29□□□□□ -1.08
TMEM41B-201ENST00000299596 IGLC3P0DOY3 106 aa8.29□□□□□ -1.08
TMEM41B-201ENST00000299596 NDUFA6P56556 154 aa8.29□□□□□ -1.08
TMEM41B-201ENST00000299596 LPAP08519 4548 aa8.29□□□□□ -1.08
TMEM41B-201ENST00000299596 IGLV5-37A0A075B6J1 123 aa8.29□□□□□ -1.08
TMEM41B-201ENST00000299596 A0A096LNJ9 63 aa8.29□□□□□ -1.08
TMEM41B-201ENST00000299596 HBDP02042 147 aa8.29□□□□□ -1.08
TMEM41B-201ENST00000299596 C18orf32Q8TCD1 76 aa8.29□□□□□ -1.08
TMEM41B-201ENST00000299596 IGLV5-39A0A0G2JS06 123 aa8.28□□□□□ -1.08
TMEM41B-201ENST00000299596 RPL37AP8A6NKH3 93 aa8.28□□□□□ -1.08
TMEM41B-201ENST00000299596 NKAPP1Q8N9T2 125 aa8.28□□□□□ -1.08
TMEM41B-201ENST00000299596 URB1-AS1Q96HZ7 61 aa8.28□□□□□ -1.08
TMEM41B-201ENST00000299596 GAGE10A6NGK3 116 aa8.26□□□□□ -1.09
TMEM41B-201ENST00000299596 ZNF22P17026 224 aaPredicted RBP8.26□□□□□ -1.09
TMEM41B-201ENST00000299596 PFN2P35080 140 aa8.26□□□□□ -1.09
TMEM41B-201ENST00000299596 SNAPINO95295 136 aa8.25□□□□□ -1.09
TMEM41B-201ENST00000299596 APOC3P02656 99 aa8.25□□□□□ -1.09
TMEM41B-201ENST00000299596 COX17Q14061 63 aa8.25□□□□□ -1.09
TMEM41B-201ENST00000299596 PMCHL1Q16048 86 aa8.24□□□□□ -1.09
TMEM41B-201ENST00000299596 NDUFA5Q16718 116 aa8.24□□□□□ -1.09
TMEM41B-201ENST00000299596 SFTA2Q6UW10 78 aa8.24□□□□□ -1.09
TMEM41B-201ENST00000299596 BAGE3Q86Y29 109 aa8.24□□□□□ -1.09
TMEM41B-201ENST00000299596 SVBPQ8N300 66 aa8.24□□□□□ -1.09
TMEM41B-201ENST00000299596 ERG28Q9UKR5 140 aa8.23□□□□□ -1.09
TMEM41B-201ENST00000299596 CRYGAP11844 174 aa8.22□□□□□ -1.09
TMEM41B-201ENST00000299596 UBE2AP49459 152 aa8.22□□□□□ -1.09
TMEM41B-201ENST00000299596 RPL24P83731 157 aaKnown RBP8.22□□□□□ -1.09
TMEM41B-201ENST00000299596 TMEM170BQ5T4T1 132 aa8.22□□□□□ -1.09
TMEM41B-201ENST00000299596 SND1-IT1Q9HBX3 110 aa8.22□□□□□ -1.09
TMEM41B-201ENST00000299596 C11orf86A6NJI1 115 aa8.21□□□□□ -1.09
TMEM41B-201ENST00000299596 IGKV2-28A0A075B6P5 120 aa8.2□□□□□ -1.1
TMEM41B-201ENST00000299596 A0A087X002 238 aa8.2□□□□□ -1.1
TMEM41B-201ENST00000299596 IGKV2D-28P01615 120 aa8.2□□□□□ -1.1
TMEM41B-201ENST00000299596 PRR4Q16378 134 aa8.2□□□□□ -1.1
TMEM41B-201ENST00000299596 KRTAP13-1Q8IUC0 172 aa8.2□□□□□ -1.1
TMEM41B-201ENST00000299596 SCO1O75880 301 aa8.2□□□□□ -1.1
TMEM41B-201ENST00000299596 VPREB1P12018 145 aa8.2□□□□□ -1.1
TMEM41B-201ENST00000299596 TYMSOSQ8TAI1 123 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms