RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 IGHV3OR16-9A0A0B4J2B5 98 aa14.01□□□□□ -0.17
SMCO4-201ENST00000298966 C2orf91Q6ZV80 131 aa14.01□□□□□ -0.17
SMCO4-201ENST00000298966 A0A087WZ39 114 aa14□□□□□ -0.17
SMCO4-201ENST00000298966 MYMXA0A1B0GTQ4 84 aa14□□□□□ -0.17
SMCO4-201ENST00000298966 J3QQQ9 107 aa14□□□□□ -0.17
SMCO4-201ENST00000298966 Q8N3U1 123 aa14□□□□□ -0.17
SMCO4-201ENST00000298966 HIGD1BQ9P298 99 aa14□□□□□ -0.17
SMCO4-201ENST00000298966 TP73-AS1Q9UF72 201 aa14□□□□□ -0.17
SMCO4-201ENST00000298966 CTAG1AP78358 180 aa13.99□□□□□ -0.17
SMCO4-201ENST00000298966 ENHOQ6UWT2 76 aa13.99□□□□□ -0.17
SMCO4-201ENST00000298966 CHCHD10Q8WYQ3 142 aaPredicted RBP13.99□□□□□ -0.17
SMCO4-201ENST00000298966 UBE2WQ96B02 151 aa13.99□□□□□ -0.17
SMCO4-201ENST00000298966 A0A087WTM6 91 aa13.98□□□□□ -0.17
SMCO4-201ENST00000298966 TRAV8-3A0A0A6YYJ7 113 aa13.98□□□□□ -0.17
SMCO4-201ENST00000298966 IGLV5-39A0A0G2JS06 123 aa13.98□□□□□ -0.17
SMCO4-201ENST00000298966 LGALS3P17931 250 aaKnown RBP13.98□□□□□ -0.17
SMCO4-201ENST00000298966 CLPSL2Q6UWE3 100 aa13.98□□□□□ -0.17
SMCO4-201ENST00000298966 TTTY13Q9BZ97 58 aa13.98□□□□□ -0.17
SMCO4-201ENST00000298966 SPINK8P0C7L1 97 aa13.97□□□□□ -0.17
SMCO4-201ENST00000298966 TSPEAR-AS2P59090 65 aa13.97□□□□□ -0.17
SMCO4-201ENST00000298966 ZNF815PA8K554 130 aa13.96□□□□□ -0.17
SMCO4-201ENST00000298966 IBA57-AS1B1ANH7 110 aa13.96□□□□□ -0.17
SMCO4-201ENST00000298966 SMIM1B2RUZ4 78 aa13.96□□□□□ -0.17
SMCO4-201ENST00000298966 GCSHP23434 173 aa13.96□□□□□ -0.17
SMCO4-201ENST00000298966 XCL1P47992 114 aa13.96□□□□□ -0.17
SMCO4-201ENST00000298966 RMI2Q96E14 147 aa13.96□□□□□ -0.17
SMCO4-201ENST00000298966 COX7A2LO14548 114 aa13.95□□□□□ -0.18
SMCO4-201ENST00000298966 SFTA2Q6UW10 78 aa13.94□□□□□ -0.18
SMCO4-201ENST00000298966 IGHV3-64A0A075B6Q5 118 aa13.93□□□□□ -0.18
SMCO4-201ENST00000298966 M0R143 59 aa13.93□□□□□ -0.18
SMCO4-201ENST00000298966 APOMO95445 188 aa13.93□□□□□ -0.18
SMCO4-201ENST00000298966 C1orf43Q9BWL3 253 aa13.93□□□□□ -0.18
SMCO4-201ENST00000298966 HAMPP81172 84 aa13.92□□□□□ -0.18
SMCO4-201ENST00000298966 HSD52Q0P140 79 aa13.91□□□□□ -0.18
SMCO4-201ENST00000298966 FOXI1Q12951 378 aa13.91□□□□□ -0.18
SMCO4-201ENST00000298966 COX11Q9Y6N1 276 aa13.91□□□□□ -0.18
SMCO4-201ENST00000298966 IGLV10-54A0A075B6I4 117 aa13.9□□□□□ -0.18
SMCO4-201ENST00000298966 GAGE12HA6NDE8 117 aa13.9□□□□□ -0.18
SMCO4-201ENST00000298966 MALP21145 153 aa13.9□□□□□ -0.18
SMCO4-201ENST00000298966 C5orf38Q86SI9 138 aa13.9□□□□□ -0.18
SMCO4-201ENST00000298966 TAL2Q16559 108 aa13.89□□□□□ -0.19
SMCO4-201ENST00000298966 SNHG12Q9BXW3 62 aa13.89□□□□□ -0.19
SMCO4-201ENST00000298966 SCGB1D4Q6XE38 83 aa13.88□□□□□ -0.19
SMCO4-201ENST00000298966 NDUFA12Q9UI09 145 aa13.88□□□□□ -0.19
SMCO4-201ENST00000298966 UBR4Q5T4S7 5183 aa13.88□□□□□ -0.19
SMCO4-201ENST00000298966 NDUFA1O15239 70 aa13.87□□□□□ -0.19
SMCO4-201ENST00000298966 LBHQ53QV2 105 aaPredicted RBP13.87□□□□□ -0.19
SMCO4-201ENST00000298966 Q8IZM0 81 aa13.87□□□□□ -0.19
SMCO4-201ENST00000298966 COX7B2Q8TF08 81 aa13.87□□□□□ -0.19
SMCO4-201ENST00000298966 CXCL5P42830 114 aa13.86□□□□□ -0.19
SMCO4-201ENST00000298966 HERV-K104P63124 156 aa13.86□□□□□ -0.19
SMCO4-201ENST00000298966 TM2D2Q9BX73 214 aa13.86□□□□□ -0.19
SMCO4-201ENST00000298966 HMCN2Q8NDA2 5059 aa13.85□□□□□ -0.19
SMCO4-201ENST00000298966 DNAH8Q96JB1 4490 aa13.85□□□□□ -0.19
SMCO4-201ENST00000298966 IGKV2D-24A0A075B6R9 120 aa13.85□□□□□ -0.19
SMCO4-201ENST00000298966 IGLV5-52A0A0A0MRZ9 124 aa13.85□□□□□ -0.19
SMCO4-201ENST00000298966 KRTAP29-1A8MX34 341 aaPredicted RBP13.85□□□□□ -0.19
SMCO4-201ENST00000298966 PRSS2P07478 247 aa13.85□□□□□ -0.19
SMCO4-201ENST00000298966 KRTAP26-1Q6PEX3 210 aa13.85□□□□□ -0.19
SMCO4-201ENST00000298966 HINT1P49773 126 aaPredicted RBP13.84□□□□□ -0.19
SMCO4-201ENST00000298966 BVES-AS1Q5T3Y7 98 aa13.84□□□□□ -0.19
SMCO4-201ENST00000298966 SERTAD4-AS1Q5TG53 156 aa13.84□□□□□ -0.19
SMCO4-201ENST00000298966 SPANXB1Q9NS25 103 aaPredicted RBP13.84□□□□□ -0.19
SMCO4-201ENST00000298966 A0A0J9YXY3 114 aa13.83□□□□□ -0.2
SMCO4-201ENST00000298966 CFAP161Q6P656 301 aa13.83□□□□□ -0.2
SMCO4-201ENST00000298966 ORAOV1Q8WV07 137 aa13.83□□□□□ -0.2
SMCO4-201ENST00000298966 PLA2G1BP04054 148 aaKnown RBP13.82□□□□□ -0.2
SMCO4-201ENST00000298966 NTN5Q8WTR8 489 aaPredicted RBP13.82□□□□□ -0.2
SMCO4-201ENST00000298966 ZNF625Q96I27 306 aaPredicted RBP13.82□□□□□ -0.2
SMCO4-201ENST00000298966 F8WDY8 70 aa13.81□□□□□ -0.2
SMCO4-201ENST00000298966 TIMM17BO60830 172 aa13.81□□□□□ -0.2
SMCO4-201ENST00000298966 C6orf226Q5I0X4 101 aa13.81□□□□□ -0.2
SMCO4-201ENST00000298966 Q9HAA7 133 aa13.81□□□□□ -0.2
SMCO4-201ENST00000298966 TOMM7Q9P0U1 55 aa13.81□□□□□ -0.2
SMCO4-201ENST00000298966 TMEM238C9JI98 176 aa13.8□□□□□ -0.2
SMCO4-201ENST00000298966 BATFQ16520 125 aa13.8□□□□□ -0.2
SMCO4-201ENST00000298966 HIST1H4GQ99525 98 aa13.8□□□□□ -0.2
SMCO4-201ENST00000298966 CIRBPQ14011 172 aaKnown RBP13.79□□□□□ -0.2
SMCO4-201ENST00000298966 CEND1Q8N111 149 aa13.79□□□□□ -0.2
SMCO4-201ENST00000298966 PSCAO43653 123 aa13.78□□□□□ -0.2
SMCO4-201ENST00000298966 Q6ZVH6 145 aa13.78□□□□□ -0.2
SMCO4-201ENST00000298966 CKS1BP61024 79 aa13.77□□□□□ -0.21
SMCO4-201ENST00000298966 SPAG11BQ08648 103 aa13.77□□□□□ -0.21
SMCO4-201ENST00000298966 KIAA0087Q14695 138 aa13.77□□□□□ -0.21
SMCO4-201ENST00000298966 COL5A1-AS1Q5SY13 56 aa13.77□□□□□ -0.21
SMCO4-201ENST00000298966 SRSF9Q13242 221 aaKnown RBP eCLIP13.76□□□□□ -0.21
SMCO4-201ENST00000298966 LITAFQ99732 161 aa13.76□□□□□ -0.21
SMCO4-201ENST00000298966 SPANXDQ9BXN6 97 aa13.75□□□□□ -0.21
SMCO4-201ENST00000298966 SPANXCQ9NY87 97 aa13.75□□□□□ -0.21
SMCO4-201ENST00000298966 FAM30AQ9NZY2 134 aa13.75□□□□□ -0.21
SMCO4-201ENST00000298966 LRCOL1A6NCL2 159 aa13.74□□□□□ -0.21
SMCO4-201ENST00000298966 ZNF561-AS1K7EIQ3 104 aa13.74□□□□□ -0.21
SMCO4-201ENST00000298966 C2orf48Q96LS8 159 aa13.74□□□□□ -0.21
SMCO4-201ENST00000298966 GVQW2A0A096LPI5 108 aaPredicted RBP13.73□□□□□ -0.21
SMCO4-201ENST00000298966 A6NDN8 102 aa13.73□□□□□ -0.21
SMCO4-201ENST00000298966 LINC00528Q8N1L1 170 aa13.73□□□□□ -0.21
SMCO4-201ENST00000298966 COPS9Q8WXC6 57 aa13.73□□□□□ -0.21
SMCO4-201ENST00000298966 FXYD2P54710 66 aa13.72□□□□□ -0.21
SMCO4-201ENST00000298966 Q8N814 137 aa13.72□□□□□ -0.21
SMCO4-201ENST00000298966 MEIG1Q5JSS6 88 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms