RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 AMELXQ99217 191 aa12.07□□□□□ -0.48
CNTNAP3-201ENST00000297668 PRR15LQ9BU68 103 aa12.07□□□□□ -0.48
CNTNAP3-201ENST00000297668 TRBV10-3A0A0K0K1G6 114 aa12.06□□□□□ -0.48
CNTNAP3-201ENST00000297668 PLAC8L1A1L4L8 177 aa12.06□□□□□ -0.48
CNTNAP3-201ENST00000297668 VPREB1P12018 145 aa12.06□□□□□ -0.48
CNTNAP3-201ENST00000297668 ADAMTSL4-AS1Q5T5F5 129 aa12.06□□□□□ -0.48
CNTNAP3-201ENST00000297668 BRI3O95415 125 aa12.06□□□□□ -0.48
CNTNAP3-201ENST00000297668 IGLV9-49A0A0B4J1Y8 123 aa12.05□□□□□ -0.48
CNTNAP3-201ENST00000297668 ANKRD11Q6UB99 2663 aaPredicted RBP12.05□□□□□ -0.48
CNTNAP3-201ENST00000297668 ZNF580Q9UK33 172 aa12.04□□□□□ -0.48
CNTNAP3-201ENST00000297668 TRAV7A0A075B6U4 112 aa12.04□□□□□ -0.48
CNTNAP3-201ENST00000297668 SOSTDC1Q6X4U4 206 aa12.04□□□□□ -0.48
CNTNAP3-201ENST00000297668 FAM30AQ9NZY2 134 aa12.04□□□□□ -0.48
CNTNAP3-201ENST00000297668 CELA1Q9UNI1 258 aa12.04□□□□□ -0.48
CNTNAP3-201ENST00000297668 LINC00474Q9P2X8 69 aa12.04□□□□□ -0.48
CNTNAP3-201ENST00000297668 A0A1W2PPR1 153 aa12.04□□□□□ -0.48
CNTNAP3-201ENST00000297668 LRP4O75096 1905 aa12.04□□□□□ -0.48
CNTNAP3-201ENST00000297668 PRR3P79522 188 aaKnown RBP12.03□□□□□ -0.48
CNTNAP3-201ENST00000297668 KRTAP10-9P60411 292 aa12.03□□□□□ -0.48
CNTNAP3-201ENST00000297668 FHL2Q14192 279 aa12.03□□□□□ -0.48
CNTNAP3-201ENST00000297668 A0A087WVE0 104 aa12.02□□□□□ -0.49
CNTNAP3-201ENST00000297668 A0A087WYN8 130 aa12.02□□□□□ -0.49
CNTNAP3-201ENST00000297668 C1orf137Q5JT78 98 aa12.02□□□□□ -0.49
CNTNAP3-201ENST00000297668 LRRK2Q5S007 2527 aa12.02□□□□□ -0.49
CNTNAP3-201ENST00000297668 RPS28P62857 69 aaKnown RBP12.01□□□□□ -0.49
CNTNAP3-201ENST00000297668 BEAN1Q3B7T3 259 aa12.01□□□□□ -0.49
CNTNAP3-201ENST00000297668 CDIP1Q9H305 208 aa12□□□□□ -0.49
CNTNAP3-201ENST00000297668 C10orf25Q5T742 122 aa11.99□□□□□ -0.49
CNTNAP3-201ENST00000297668 C6orf223Q8N319 242 aa11.99□□□□□ -0.49
CNTNAP3-201ENST00000297668 SMR3AQ99954 134 aa11.99□□□□□ -0.49
CNTNAP3-201ENST00000297668 CHD8Q9HCK8 2581 aa11.98□□□□□ -0.49
CNTNAP3-201ENST00000297668 Q6ZSN1 163 aa11.97□□□□□ -0.49
CNTNAP3-201ENST00000297668 PTPRSQ13332 1948 aa11.97□□□□□ -0.49
CNTNAP3-201ENST00000297668 LY6G6CO95867 125 aa11.96□□□□□ -0.49
CNTNAP3-201ENST00000297668 LINC00208Q96KT6 92 aa11.95□□□□□ -0.5
CNTNAP3-201ENST00000297668 Q6ZTC4 211 aa11.95□□□□□ -0.5
CNTNAP3-201ENST00000297668 ZNF462Q96JM2 2506 aa11.95□□□□□ -0.5
CNTNAP3-201ENST00000297668 C4orf26Q17RF5 130 aa11.95□□□□□ -0.5
CNTNAP3-201ENST00000297668 A0A1B0GUV1 79 aa11.94□□□□□ -0.5
CNTNAP3-201ENST00000297668 REG3GQ6UW15 175 aa11.94□□□□□ -0.5
CNTNAP3-201ENST00000297668 Q8N3U1 123 aa11.94□□□□□ -0.5
CNTNAP3-201ENST00000297668 MTORP42345 2549 aa11.93□□□□□ -0.5
CNTNAP3-201ENST00000297668 PLA2G2AP14555 144 aa11.93□□□□□ -0.5
CNTNAP3-201ENST00000297668 AGRNO00468 2067 aa11.92□□□□□ -0.5
CNTNAP3-201ENST00000297668 EXPH5Q8NEV8 1989 aa11.91□□□□□ -0.5
CNTNAP3-201ENST00000297668 RAI1Q7Z5J4 1906 aaPredicted RBP11.9□□□□□ -0.5
CNTNAP3-201ENST00000297668 C16orf95Q9H693 158 aa11.9□□□□□ -0.5
CNTNAP3-201ENST00000297668 KIF25-AS1Q9Y6Z4 181 aa11.9□□□□□ -0.51
CNTNAP3-201ENST00000297668 ESRGQ1W209 222 aa11.89□□□□□ -0.51
CNTNAP3-201ENST00000297668 MUC4Q99102 2169 aa11.89□□□□□ -0.51
CNTNAP3-201ENST00000297668 LINC00575Q6W349 94 aa11.89□□□□□ -0.51
CNTNAP3-201ENST00000297668 LINC01547P58512 204 aaPredicted RBP11.89□□□□□ -0.51
CNTNAP3-201ENST00000297668 SPTBN4Q9H254 2564 aa11.88□□□□□ -0.51
CNTNAP3-201ENST00000297668 C2orf48Q96LS8 159 aa11.87□□□□□ -0.51
CNTNAP3-201ENST00000297668 TRBV7-7A0A0K0K1E9 115 aa11.87□□□□□ -0.51
CNTNAP3-201ENST00000297668 PRYO14603 147 aa11.87□□□□□ -0.51
CNTNAP3-201ENST00000297668 CRYGAP11844 174 aa11.87□□□□□ -0.51
CNTNAP3-201ENST00000297668 LINC00337Q8N6G1 96 aa11.86□□□□□ -0.51
CNTNAP3-201ENST00000297668 NUPR2A6NF83 97 aa11.86□□□□□ -0.51
CNTNAP3-201ENST00000297668 F8WDY8 70 aa11.86□□□□□ -0.51
CNTNAP3-201ENST00000297668 LINC01561Q8N1V8 128 aa11.86□□□□□ -0.51
CNTNAP3-201ENST00000297668 LINC00846Q9NV44 126 aa11.85□□□□□ -0.51
CNTNAP3-201ENST00000297668 SERTAD4-AS1Q5TG53 156 aa11.85□□□□□ -0.51
CNTNAP3-201ENST00000297668 LYPD5Q6UWN5 251 aa11.85□□□□□ -0.51
CNTNAP3-201ENST00000297668 A0A087WSZ3 146 aa11.85□□□□□ -0.51
CNTNAP3-201ENST00000297668 TRBV7-6A0A0J9YX20 115 aa11.85□□□□□ -0.51
CNTNAP3-201ENST00000297668 PSPHP1O15172 72 aa11.85□□□□□ -0.51
CNTNAP3-201ENST00000297668 CPAMD8Q8IZJ3 1885 aa11.85□□□□□ -0.51
CNTNAP3-201ENST00000297668 Q6ZVQ6 151 aa11.84□□□□□ -0.51
CNTNAP3-201ENST00000297668 CIRBP-AS1Q8TBR5 109 aa11.84□□□□□ -0.51
CNTNAP3-201ENST00000297668 Q9BRP9 147 aa11.84□□□□□ -0.51
CNTNAP3-201ENST00000297668 A8MTW9 85 aa11.84□□□□□ -0.51
CNTNAP3-201ENST00000297668 IGHV6-1A0A0B4J1U7 121 aa11.83□□□□□ -0.52
CNTNAP3-201ENST00000297668 CENPFP49454 3210 aa11.82□□□□□ -0.52
CNTNAP3-201ENST00000297668 IGLV5-39A0A0G2JS06 123 aa11.81□□□□□ -0.52
CNTNAP3-201ENST00000297668 Q6ZRU5 148 aa11.81□□□□□ -0.52
CNTNAP3-201ENST00000297668 C11orf72Q8NBR9 251 aa11.8□□□□□ -0.52
CNTNAP3-201ENST00000297668 TMEM254Q8TBM7 123 aa11.79□□□□□ -0.52
CNTNAP3-201ENST00000297668 F8P00451 2351 aa11.79□□□□□ -0.52
CNTNAP3-201ENST00000297668 LINC01546A6NGU7 62 aa11.78□□□□□ -0.52
CNTNAP3-201ENST00000297668 LINC00315P59091 139 aa11.78□□□□□ -0.52
CNTNAP3-201ENST00000297668 LINC01556Q5JQF7 62 aa11.78□□□□□ -0.52
CNTNAP3-201ENST00000297668 IGHV3OR16-9A0A0B4J2B5 98 aa11.78□□□□□ -0.52
CNTNAP3-201ENST00000297668 TET2Q6N021 2002 aaPredicted RBP11.77□□□□□ -0.52
CNTNAP3-201ENST00000297668 IGLV5-52A0A0A0MRZ9 124 aa11.77□□□□□ -0.53
CNTNAP3-201ENST00000297668 PCOTHQ58A44 107 aa11.77□□□□□ -0.53
CNTNAP3-201ENST00000297668 ADAMTS20P59510 1910 aa11.77□□□□□ -0.53
CNTNAP3-201ENST00000297668 DEFB116Q30KQ4 102 aa11.76□□□□□ -0.53
CNTNAP3-201ENST00000297668 FASNP49327 2511 aaKnown RBP11.75□□□□□ -0.53
CNTNAP3-201ENST00000297668 H0Y9P7 68 aa11.75□□□□□ -0.53
CNTNAP3-201ENST00000297668 GOLGB1Q14789 3259 aaKnown RBP11.74□□□□□ -0.53
CNTNAP3-201ENST00000297668 COL5A1P20908 1838 aaPredicted RBP11.74□□□□□ -0.53
CNTNAP3-201ENST00000297668 PRLHP81277 87 aa11.73□□□□□ -0.53
CNTNAP3-201ENST00000297668 HCG22E2RYF7 251 aa11.72□□□□□ -0.53
CNTNAP3-201ENST00000297668 FAM19A4Q96LR4 140 aa11.72□□□□□ -0.53
CNTNAP3-201ENST00000297668 POLQO75417 2590 aa11.72□□□□□ -0.53
CNTNAP3-201ENST00000297668 Q8N2B8 174 aa11.71□□□□□ -0.53
CNTNAP3-201ENST00000297668 CXCL6P80162 114 aa11.71□□□□□ -0.53
CNTNAP3-201ENST00000297668 C22orf24Q9Y442 160 aa11.7□□□□□ -0.54
CNTNAP3-201ENST00000297668 SMCR5Q8TEV8 140 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms