RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 UNQ6190/PRO20217Q6UXQ8 127 aa17.97■□□□□ 0.47
CHCHD4-201ENST00000295767 HECTD4Q9Y4D8 3996 aa17.96■□□□□ 0.47
CHCHD4-201ENST00000295767 LINC01620Q4KN68 170 aa17.95■□□□□ 0.46
CHCHD4-201ENST00000295767 C9orf163Q8N9P6 203 aa17.94■□□□□ 0.46
CHCHD4-201ENST00000295767 LEPROTO15243 131 aa17.94■□□□□ 0.46
CHCHD4-201ENST00000295767 CXCL5P42830 114 aa17.94■□□□□ 0.46
CHCHD4-201ENST00000295767 E9PLD3 99 aa17.93■□□□□ 0.46
CHCHD4-201ENST00000295767 TSPEAR-AS2P59090 65 aa17.93■□□□□ 0.46
CHCHD4-201ENST00000295767 JOSD1Q15040 202 aaPredicted RBP17.91■□□□□ 0.46
CHCHD4-201ENST00000295767 PLEKHB2Q96CS7 222 aa17.91■□□□□ 0.46
CHCHD4-201ENST00000295767 C6orf48Q9UBA6 75 aa17.91■□□□□ 0.46
CHCHD4-201ENST00000295767 PKHD1P08F94 4074 aa17.91■□□□□ 0.46
CHCHD4-201ENST00000295767 MAJINQ3KP22 176 aa17.9■□□□□ 0.46
CHCHD4-201ENST00000295767 J3QQQ9 107 aa17.89■□□□□ 0.45
CHCHD4-201ENST00000295767 GCSHP23434 173 aa17.88■□□□□ 0.45
CHCHD4-201ENST00000295767 ANKRD39Q53RE8 183 aa17.88■□□□□ 0.45
CHCHD4-201ENST00000295767 ZNF625Q96I27 306 aaPredicted RBP17.88■□□□□ 0.45
CHCHD4-201ENST00000295767 IGKV2D-26A0A0A0MRZ7 120 aa17.87■□□□□ 0.45
CHCHD4-201ENST00000295767 TRBV30A0A0K0K1B3 111 aa17.87■□□□□ 0.45
CHCHD4-201ENST00000295767 C16orf90A8MZG2 172 aa17.87■□□□□ 0.45
CHCHD4-201ENST00000295767 DNAH5Q8TE73 4624 aa17.87■□□□□ 0.45
CHCHD4-201ENST00000295767 RNF151Q2KHN1 245 aa17.87■□□□□ 0.45
CHCHD4-201ENST00000295767 LGALS3P17931 250 aaKnown RBP17.86■□□□□ 0.45
CHCHD4-201ENST00000295767 C9orf116Q5BN46 136 aaPredicted RBP17.86■□□□□ 0.45
CHCHD4-201ENST00000295767 PYY3Q5JQD4 70 aa17.86■□□□□ 0.45
CHCHD4-201ENST00000295767 NDUFA12Q9UI09 145 aa17.85■□□□□ 0.45
CHCHD4-201ENST00000295767 SDIM1Q6ZPB5 146 aa17.83■□□□□ 0.45
CHCHD4-201ENST00000295767 KRTAP10-1P60331 282 aa17.83■□□□□ 0.44
CHCHD4-201ENST00000295767 SFTA2Q6UW10 78 aa17.83■□□□□ 0.44
CHCHD4-201ENST00000295767 HSBP1L1C9JCN9 74 aa17.81■□□□□ 0.44
CHCHD4-201ENST00000295767 MYMXA0A1B0GTQ4 84 aa17.8■□□□□ 0.44
CHCHD4-201ENST00000295767 NMUP48645 174 aa17.8■□□□□ 0.44
CHCHD4-201ENST00000295767 TTTY13Q9BZ97 58 aa17.8■□□□□ 0.44
CHCHD4-201ENST00000295767 LOC107984640A0A0U1RRK4 108 aa17.79■□□□□ 0.44
CHCHD4-201ENST00000295767 EPPK1P58107 5090 aaKnown RBP17.78■□□□□ 0.44
CHCHD4-201ENST00000295767 TLX1NBP0CAT3 122 aa17.77■□□□□ 0.44
CHCHD4-201ENST00000295767 HERV-K104P63124 156 aa17.77■□□□□ 0.44
CHCHD4-201ENST00000295767 LOC105371267A0A1B0GV96 52 aa17.76■□□□□ 0.43
CHCHD4-201ENST00000295767 RPL18AQ02543 176 aaKnown RBP17.76■□□□□ 0.43
CHCHD4-201ENST00000295767 ERG28Q9UKR5 140 aa17.76■□□□□ 0.43
CHCHD4-201ENST00000295767 A0A096LNI7 61 aa17.76■□□□□ 0.43
CHCHD4-201ENST00000295767 PKIGQ9Y2B9 76 aa17.76■□□□□ 0.43
CHCHD4-201ENST00000295767 NDUFC2-KCTD14E9PQ53 114 aa17.75■□□□□ 0.43
CHCHD4-201ENST00000295767 Q6ZRP5 223 aa17.75■□□□□ 0.43
CHCHD4-201ENST00000295767 PFN2P35080 140 aa17.74■□□□□ 0.43
CHCHD4-201ENST00000295767 ZNF815PA8K554 130 aa17.73■□□□□ 0.43
CHCHD4-201ENST00000295767 CHTF8P0CG12 524 aa17.73■□□□□ 0.43
CHCHD4-201ENST00000295767 GAGE2BQ13066 116 aa17.73■□□□□ 0.43
CHCHD4-201ENST00000295767 PCP2Q8IVA1 136 aa17.73■□□□□ 0.43
CHCHD4-201ENST00000295767 VAMP8Q9BV40 100 aa17.73■□□□□ 0.43
CHCHD4-201ENST00000295767 DYNC1H1Q14204 4646 aaKnown RBP17.73■□□□□ 0.43
CHCHD4-201ENST00000295767 IGKV2-24A0A0C4DH68 120 aa17.72■□□□□ 0.43
CHCHD4-201ENST00000295767 PAM16Q9Y3D7 125 aa17.72■□□□□ 0.43
CHCHD4-201ENST00000295767 PANO1I0J062 215 aa17.72■□□□□ 0.43
CHCHD4-201ENST00000295767 FAM30AQ9NZY2 134 aa17.72■□□□□ 0.43
CHCHD4-201ENST00000295767 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.72■□□□□ 0.43
CHCHD4-201ENST00000295767 PTTG1IPP53801 180 aa17.71■□□□□ 0.43
CHCHD4-201ENST00000295767 MEIG1Q5JSS6 88 aa17.71■□□□□ 0.43
CHCHD4-201ENST00000295767 GAGE2EQ4V326 116 aa17.7■□□□□ 0.42
CHCHD4-201ENST00000295767 GAGE2DQ9UEU5 116 aa17.7■□□□□ 0.42
CHCHD4-201ENST00000295767 COX17Q14061 63 aa17.69■□□□□ 0.42
CHCHD4-201ENST00000295767 Q6ZSA8 131 aa17.69■□□□□ 0.42
CHCHD4-201ENST00000295767 A0A0J9YXY3 114 aa17.69■□□□□ 0.42
CHCHD4-201ENST00000295767 A0A0U1RRA0 63 aa17.69■□□□□ 0.42
CHCHD4-201ENST00000295767 SMIM13P0DJ93 91 aa17.69■□□□□ 0.42
CHCHD4-201ENST00000295767 SPATA45Q537H7 98 aa17.69■□□□□ 0.42
CHCHD4-201ENST00000295767 LRP1BQ9NZR2 4599 aa17.67■□□□□ 0.42
CHCHD4-201ENST00000295767 LINC00158P58513 81 aa17.67■□□□□ 0.42
CHCHD4-201ENST00000295767 CIRBPQ14011 172 aaKnown RBP17.66■□□□□ 0.42
CHCHD4-201ENST00000295767 SPACA4Q8TDM5 124 aa17.66■□□□□ 0.42
CHCHD4-201ENST00000295767 LINC00587B1AMM8 73 aa17.65■□□□□ 0.42
CHCHD4-201ENST00000295767 XAGE1AQ9HD64 81 aa17.64■□□□□ 0.41
CHCHD4-201ENST00000295767 LINC00474Q9P2X8 69 aa17.64■□□□□ 0.41
CHCHD4-201ENST00000295767 C9orf129Q5T035 196 aaKnown RBP17.62■□□□□ 0.41
CHCHD4-201ENST00000295767 TP73-AS1Q9UF72 201 aa17.61■□□□□ 0.41
CHCHD4-201ENST00000295767 COX8AP10176 69 aa17.61■□□□□ 0.41
CHCHD4-201ENST00000295767 SCGB1D4Q6XE38 83 aa17.61■□□□□ 0.41
CHCHD4-201ENST00000295767 MIR7-3HGQ8N6C7 128 aa17.61■□□□□ 0.41
CHCHD4-201ENST00000295767 DNAH8Q96JB1 4490 aa17.6■□□□□ 0.41
CHCHD4-201ENST00000295767 HAMPP81172 84 aa17.6■□□□□ 0.41
CHCHD4-201ENST00000295767 DPH3Q96FX2 82 aa17.6■□□□□ 0.41
CHCHD4-201ENST00000295767 SND1-IT1Q9HBX3 110 aa17.6■□□□□ 0.41
CHCHD4-201ENST00000295767 SMIM6P0DI80 62 aa17.59■□□□□ 0.41
CHCHD4-201ENST00000295767 DAND5Q8N907 189 aa17.59■□□□□ 0.41
CHCHD4-201ENST00000295767 C14orf144Q96I85 54 aa17.59■□□□□ 0.41
CHCHD4-201ENST00000295767 BOD1L2Q8IYS8 172 aa17.58■□□□□ 0.41
CHCHD4-201ENST00000295767 LITAFQ99732 161 aa17.58■□□□□ 0.41
CHCHD4-201ENST00000295767 ADAMTSL4-AS1Q5T5F5 129 aa17.58■□□□□ 0.4
CHCHD4-201ENST00000295767 SCXQ7RTU7 201 aa17.58■□□□□ 0.4
CHCHD4-201ENST00000295767 A0A087WYN8 130 aa17.57■□□□□ 0.4
CHCHD4-201ENST00000295767 TIMM17BO60830 172 aa17.57■□□□□ 0.4
CHCHD4-201ENST00000295767 S100A12P80511 92 aa17.56■□□□□ 0.4
CHCHD4-201ENST00000295767 FAM168BA1KXE4 195 aa17.55■□□□□ 0.4
CHCHD4-201ENST00000295767 CIRBP-AS1Q8TBR5 109 aa17.55■□□□□ 0.4
CHCHD4-201ENST00000295767 XGP55808 180 aa17.54■□□□□ 0.4
CHCHD4-201ENST00000295767 A0A1W2PNN7 141 aa17.54■□□□□ 0.4
CHCHD4-201ENST00000295767 DLEU1O43261 78 aa17.53■□□□□ 0.4
CHCHD4-201ENST00000295767 PLAC8Q9NZF1 115 aa17.52■□□□□ 0.4
CHCHD4-201ENST00000295767 TMEM238C9JI98 176 aa17.5■□□□□ 0.39
CHCHD4-201ENST00000295767 FAM19A5Q7Z5A7 132 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms