RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 NANOS2P60321 138 aaKnown RBP14.09□□□□□ -0.15
TMED4-201ENST00000289577 EPG5Q9HCE0 2579 aa14.09□□□□□ -0.15
TMED4-201ENST00000289577 SETXQ7Z333 2677 aaKnown RBP14.09□□□□□ -0.15
TMED4-201ENST00000289577 CCKP06307 115 aa14.09□□□□□ -0.15
TMED4-201ENST00000289577 LINC00612Q8N6U2 182 aa14.08□□□□□ -0.16
TMED4-201ENST00000289577 CENPEQ02224 2701 aa14.08□□□□□ -0.16
TMED4-201ENST00000289577 TLN2Q9Y4G6 2542 aa14.07□□□□□ -0.16
TMED4-201ENST00000289577 KIR2DL5BQ8NHK3 375 aa14.07□□□□□ -0.16
TMED4-201ENST00000289577 CACNA1AO00555 2505 aa14.07□□□□□ -0.16
TMED4-201ENST00000289577 PRB1P04280 392 aa14.06□□□□□ -0.16
TMED4-201ENST00000289577 JMJD1CQ15652 2540 aa14.06□□□□□ -0.16
TMED4-201ENST00000289577 LINC01006Q8NI28 216 aa14.06□□□□□ -0.16
TMED4-201ENST00000289577 GYPEP15421 78 aa14.05□□□□□ -0.16
TMED4-201ENST00000289577 Q8N814 137 aa14.05□□□□□ -0.16
TMED4-201ENST00000289577 NDUFC2O95298 119 aa14.05□□□□□ -0.16
TMED4-201ENST00000289577 DEFB130BP0DP73 79 aa14.05□□□□□ -0.16
TMED4-201ENST00000289577 DEFB130AP0DP74 79 aa14.05□□□□□ -0.16
TMED4-201ENST00000289577 C16orf95Q9H693 158 aa14.05□□□□□ -0.16
TMED4-201ENST00000289577 A0A087WVE0 104 aa14.04□□□□□ -0.16
TMED4-201ENST00000289577 SERP2Q8N6R1 65 aa14.04□□□□□ -0.16
TMED4-201ENST00000289577 hADV29S1A0JD25 119 aa14.03□□□□□ -0.16
TMED4-201ENST00000289577 JMJD7-PLA2G4BH0Y9G9 81 aa14.03□□□□□ -0.16
TMED4-201ENST00000289577 LRRK2Q5S007 2527 aa14.03□□□□□ -0.16
TMED4-201ENST00000289577 ABCA12Q86UK0 2595 aa14.03□□□□□ -0.16
TMED4-201ENST00000289577 CUBNO60494 3623 aa14.02□□□□□ -0.16
TMED4-201ENST00000289577 PRR3P79522 188 aaKnown RBP14.02□□□□□ -0.16
TMED4-201ENST00000289577 KIAA0087Q14695 138 aa14.02□□□□□ -0.16
TMED4-201ENST00000289577 USP17L23D6RBM5 183 aa14.01□□□□□ -0.17
TMED4-201ENST00000289577 COX17Q14061 63 aa14.01□□□□□ -0.17
TMED4-201ENST00000289577 UPK3BQ9BT76 320 aa14.01□□□□□ -0.17
TMED4-201ENST00000289577 CYSTM1Q9H1C7 97 aa14.01□□□□□ -0.17
TMED4-201ENST00000289577 TMEM256-PLSCR3K7ERE1 68 aa14□□□□□ -0.17
TMED4-201ENST00000289577 S100A7L2Q5SY68 101 aa14□□□□□ -0.17
TMED4-201ENST00000289577 CLPSL2Q6UWE3 100 aa14□□□□□ -0.17
TMED4-201ENST00000289577 SONP18583 2426 aaKnown RBP13.99□□□□□ -0.17
TMED4-201ENST00000289577 J3KT08 172 aa13.99□□□□□ -0.17
TMED4-201ENST00000289577 NF1P21359 2839 aa13.98□□□□□ -0.17
TMED4-201ENST00000289577 WFDC11Q8NEX6 87 aa13.98□□□□□ -0.17
TMED4-201ENST00000289577 ZNF462Q96JM2 2506 aa13.98□□□□□ -0.17
TMED4-201ENST00000289577 UBR5O95071 2799 aaPredicted RBP13.98□□□□□ -0.17
TMED4-201ENST00000289577 IGHV4-28A0A0C4DH34 117 aa13.98□□□□□ -0.17
TMED4-201ENST00000289577 LOC107984640A0A0U1RRK4 108 aa13.98□□□□□ -0.17
TMED4-201ENST00000289577 RNASE1P07998 156 aaKnown RBP13.98□□□□□ -0.17
TMED4-201ENST00000289577 RPS28P62857 69 aaKnown RBP13.98□□□□□ -0.17
TMED4-201ENST00000289577 ATP5EP2Q5VTU8 51 aa13.98□□□□□ -0.17
TMED4-201ENST00000289577 CD164L2Q6UWJ8 174 aa13.98□□□□□ -0.17
TMED4-201ENST00000289577 NIPBLQ6KC79 2804 aaeCLIP13.97□□□□□ -0.17
TMED4-201ENST00000289577 PRO0255Q9UI72 69 aa13.97□□□□□ -0.17
TMED4-201ENST00000289577 LYPD5Q6UWN5 251 aa13.96□□□□□ -0.17
TMED4-201ENST00000289577 BBC3Q96PG8 261 aaPredicted RBP13.96□□□□□ -0.17
TMED4-201ENST00000289577 CFAP161Q6P656 301 aa13.95□□□□□ -0.18
TMED4-201ENST00000289577 ITPR3Q14573 2671 aa13.95□□□□□ -0.18
TMED4-201ENST00000289577 LINC00269Q8N2A0 174 aa13.94□□□□□ -0.18
TMED4-201ENST00000289577 X6R8D5 127 aa13.94□□□□□ -0.18
TMED4-201ENST00000289577 TMEM258P61165 79 aa13.93□□□□□ -0.18
TMED4-201ENST00000289577 CHCHD10Q8WYQ3 142 aaPredicted RBP13.93□□□□□ -0.18
TMED4-201ENST00000289577 A0A096LPF7 62 aa13.92□□□□□ -0.18
TMED4-201ENST00000289577 Q8NDZ9 215 aa13.92□□□□□ -0.18
TMED4-201ENST00000289577 C6orf99Q4VX62 202 aa13.91□□□□□ -0.18
TMED4-201ENST00000289577 ZNF843Q8N446 348 aa13.91□□□□□ -0.18
TMED4-201ENST00000289577 C9orf116Q5BN46 136 aaPredicted RBP13.91□□□□□ -0.18
TMED4-201ENST00000289577 SMIM9A6NGZ8 99 aa13.9□□□□□ -0.18
TMED4-201ENST00000289577 HILS1P60008 231 aa13.9□□□□□ -0.18
TMED4-201ENST00000289577 LINC00575Q6W349 94 aa13.9□□□□□ -0.18
TMED4-201ENST00000289577 APCP25054 2843 aa13.9□□□□□ -0.18
TMED4-201ENST00000289577 TRBV10-3A0A0K0K1G6 114 aa13.89□□□□□ -0.19
TMED4-201ENST00000289577 KRTAP1-1Q07627 177 aa13.89□□□□□ -0.19
TMED4-201ENST00000289577 REG3AQ06141 175 aa13.88□□□□□ -0.19
TMED4-201ENST00000289577 FAM19A5Q7Z5A7 132 aaPredicted RBP13.87□□□□□ -0.19
TMED4-201ENST00000289577 IGLV10-54A0A075B6I4 117 aa13.87□□□□□ -0.19
TMED4-201ENST00000289577 WFDC9Q8NEX5 89 aa13.87□□□□□ -0.19
TMED4-201ENST00000289577 ZFYVE26Q68DK2 2539 aa13.86□□□□□ -0.19
TMED4-201ENST00000289577 FAM19A1Q7Z5A9 133 aa13.86□□□□□ -0.19
TMED4-201ENST00000289577 Q8N3U1 123 aa13.86□□□□□ -0.19
TMED4-201ENST00000289577 DPH3Q96FX2 82 aa13.86□□□□□ -0.19
TMED4-201ENST00000289577 UBL5Q9BZL1 73 aa13.86□□□□□ -0.19
TMED4-201ENST00000289577 SETD2Q9BYW2 2564 aaPredicted RBP13.86□□□□□ -0.19
TMED4-201ENST00000289577 ANGP03950 147 aaKnown RBP13.86□□□□□ -0.19
TMED4-201ENST00000289577 ENHOQ6UWT2 76 aa13.86□□□□□ -0.19
TMED4-201ENST00000289577 ANK3Q12955 4377 aaKnown RBP13.85□□□□□ -0.19
TMED4-201ENST00000289577 LYRM9A8MSI8 78 aa13.85□□□□□ -0.19
TMED4-201ENST00000289577 GHRHP01286 108 aa13.84□□□□□ -0.19
TMED4-201ENST00000289577 Q6ZQT0 140 aa13.84□□□□□ -0.19
TMED4-201ENST00000289577 MUC7Q8TAX7 377 aa13.84□□□□□ -0.19
TMED4-201ENST00000289577 LOC110117498A0A087WWA1 95 aa13.84□□□□□ -0.19
TMED4-201ENST00000289577 ZNF561-AS1K7EIQ3 104 aa13.83□□□□□ -0.2
TMED4-201ENST00000289577 TRAV23DV6A0A075B6W5 121 aa13.83□□□□□ -0.2
TMED4-201ENST00000289577 RBM3P98179 157 aaKnown RBP13.83□□□□□ -0.2
TMED4-201ENST00000289577 FN1P02751 2386 aaKnown RBP13.82□□□□□ -0.2
TMED4-201ENST00000289577 C6orf223Q8N319 242 aa13.82□□□□□ -0.2
TMED4-201ENST00000289577 FLNAP21333 2647 aaKnown RBP13.82□□□□□ -0.2
TMED4-201ENST00000289577 C10orf25Q5T742 122 aa13.82□□□□□ -0.2
TMED4-201ENST00000289577 USP24Q9UPU5 2620 aa13.81□□□□□ -0.2
TMED4-201ENST00000289577 IGLV6-57P01721 117 aa13.8□□□□□ -0.2
TMED4-201ENST00000289577 UNQ6190/PRO20217Q6UXQ8 127 aa13.8□□□□□ -0.2
TMED4-201ENST00000289577 LINC00482Q8N8I6 264 aa13.8□□□□□ -0.2
TMED4-201ENST00000289577 CCDC168Q8NDH2 2452 aa13.8□□□□□ -0.2
TMED4-201ENST00000289577 A0A0J9YWU9 116 aa13.8□□□□□ -0.2
TMED4-201ENST00000289577 IGHV4-30-4P0DP06 118 aa13.8□□□□□ -0.2
TMED4-201ENST00000289577 SPAG11BQ08648 103 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms