RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 OR13C6PQ8NH95 151 aa3.4□□□□□ -1.87
PPP1R9A-201ENST00000289495 CDIP1Q9H305 208 aa3.4□□□□□ -1.87
PPP1R9A-201ENST00000289495 TEX49A0A1B0GTD5 131 aa3.4□□□□□ -1.87
PPP1R9A-201ENST00000289495 LINC00959A0A1B0GUT2 108 aa3.4□□□□□ -1.87
PPP1R9A-201ENST00000289495 IBA57-AS1B1ANH7 110 aa3.4□□□□□ -1.87
PPP1R9A-201ENST00000289495 SOSTDC1Q6X4U4 206 aa3.4□□□□□ -1.87
PPP1R9A-201ENST00000289495 X6R8D5 127 aa3.4□□□□□ -1.87
PPP1R9A-201ENST00000289495 CSMD2Q7Z408 3487 aa3.4□□□□□ -1.87
PPP1R9A-201ENST00000289495 A0A087WZ39 114 aa3.39□□□□□ -1.87
PPP1R9A-201ENST00000289495 MT-ATP8P03928 68 aa3.39□□□□□ -1.87
PPP1R9A-201ENST00000289495 ATP5G1P05496 136 aa3.39□□□□□ -1.87
PPP1R9A-201ENST00000289495 XGP55808 180 aa3.39□□□□□ -1.87
PPP1R9A-201ENST00000289495 CKS1BP61024 79 aa3.39□□□□□ -1.87
PPP1R9A-201ENST00000289495 IGHV3OR16-9A0A0B4J2B5 98 aa3.39□□□□□ -1.87
PPP1R9A-201ENST00000289495 DEFB4AO15263 64 aa3.39□□□□□ -1.87
PPP1R9A-201ENST00000289495 MALP21145 153 aa3.39□□□□□ -1.87
PPP1R9A-201ENST00000289495 LINC00612Q8N6U2 182 aa3.39□□□□□ -1.87
PPP1R9A-201ENST00000289495 IGHV4-28A0A0C4DH34 117 aa3.39□□□□□ -1.87
PPP1R9A-201ENST00000289495 ANGP03950 147 aaKnown RBP3.39□□□□□ -1.87
PPP1R9A-201ENST00000289495 PPDPFQ9H3Y8 114 aa3.39□□□□□ -1.87
PPP1R9A-201ENST00000289495 NOTCH1P46531 2555 aa3.38□□□□□ -1.87
PPP1R9A-201ENST00000289495 TRACP01848 142 aa3.38□□□□□ -1.87
PPP1R9A-201ENST00000289495 C3orf56Q8N813 242 aa3.38□□□□□ -1.87
PPP1R9A-201ENST00000289495 A0A1B0GUV1 79 aa3.38□□□□□ -1.87
PPP1R9A-201ENST00000289495 SPART-AS1P0CW21 52 aa3.38□□□□□ -1.87
PPP1R9A-201ENST00000289495 MIFP14174 115 aa3.38□□□□□ -1.87
PPP1R9A-201ENST00000289495 GAGE2BQ13066 116 aa3.38□□□□□ -1.87
PPP1R9A-201ENST00000289495 MRPL23Q16540 153 aaKnown RBP3.38□□□□□ -1.87
PPP1R9A-201ENST00000289495 GAGE2EQ4V326 116 aa3.38□□□□□ -1.87
PPP1R9A-201ENST00000289495 GAGE2DQ9UEU5 116 aa3.38□□□□□ -1.87
PPP1R9A-201ENST00000289495 CXCL5P42830 114 aa3.37□□□□□ -1.87
PPP1R9A-201ENST00000289495 Q8IZM0 81 aa3.37□□□□□ -1.87
PPP1R9A-201ENST00000289495 LINC01600Q96MT4 127 aa3.37□□□□□ -1.87
PPP1R9A-201ENST00000289495 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.37□□□□□ -1.87
PPP1R9A-201ENST00000289495 TRAV26-1A0A087WT03 109 aa3.37□□□□□ -1.87
PPP1R9A-201ENST00000289495 BAALC-AS2P0C853 105 aa3.37□□□□□ -1.87
PPP1R9A-201ENST00000289495 CCL18P55774 89 aa3.37□□□□□ -1.87
PPP1R9A-201ENST00000289495 LINC00269Q8N2A0 174 aa3.37□□□□□ -1.87
PPP1R9A-201ENST00000289495 C15orf53Q8NAA6 179 aa3.37□□□□□ -1.87
PPP1R9A-201ENST00000289495 IGLV10-54A0A075B6I4 117 aa3.37□□□□□ -1.87
PPP1R9A-201ENST00000289495 H0YGX0 51 aa3.37□□□□□ -1.87
PPP1R9A-201ENST00000289495 INAFM2P0DMQ5 153 aa3.37□□□□□ -1.87
PPP1R9A-201ENST00000289495 NF1P21359 2839 aa3.37□□□□□ -1.87
PPP1R9A-201ENST00000289495 RPL28P46779 137 aaKnown RBP3.36□□□□□ -1.87
PPP1R9A-201ENST00000289495 REG3AQ06141 175 aa3.36□□□□□ -1.87
PPP1R9A-201ENST00000289495 TTC32Q5I0X7 151 aa3.36□□□□□ -1.87
PPP1R9A-201ENST00000289495 LINC01561Q8N1V8 128 aa3.36□□□□□ -1.87
PPP1R9A-201ENST00000289495 CHCHD10Q8WYQ3 142 aaPredicted RBP3.36□□□□□ -1.87
PPP1R9A-201ENST00000289495 ANAPC13Q9BS18 74 aa3.36□□□□□ -1.87
PPP1R9A-201ENST00000289495 FAM240AA0A1B0GVK7 77 aa3.36□□□□□ -1.87
PPP1R9A-201ENST00000289495 CD164L2Q6UWJ8 174 aa3.36□□□□□ -1.87
PPP1R9A-201ENST00000289495 LINC00337Q8N6G1 96 aa3.36□□□□□ -1.87
PPP1R9A-201ENST00000289495 ACYP1P07311 99 aa3.36□□□□□ -1.87
PPP1R9A-201ENST00000289495 TENM4Q6N022 2769 aa3.36□□□□□ -1.87
PPP1R9A-201ENST00000289495 SMIM11BQ8TCY0 68 aa3.36□□□□□ -1.87
PPP1R9A-201ENST00000289495 CITED1Q99966 193 aa3.35□□□□□ -1.87
PPP1R9A-201ENST00000289495 Q9HAA7 133 aa3.35□□□□□ -1.87
PPP1R9A-201ENST00000289495 CELA1Q9UNI1 258 aa3.35□□□□□ -1.87
PPP1R9A-201ENST00000289495 IGHV4-30-4P0DP06 118 aa3.35□□□□□ -1.87
PPP1R9A-201ENST00000289495 LELP1Q5T871 98 aa3.35□□□□□ -1.87
PPP1R9A-201ENST00000289495 SPATA3Q8NHX4 192 aa3.35□□□□□ -1.87
PPP1R9A-201ENST00000289495 PDZD2O15018 2839 aa3.35□□□□□ -1.87
PPP1R9A-201ENST00000289495 IGKV2-28A0A075B6P5 120 aa3.35□□□□□ -1.87
PPP1R9A-201ENST00000289495 IGKV2D-28P01615 120 aa3.35□□□□□ -1.87
PPP1R9A-201ENST00000289495 SPAG11BQ08648 103 aa3.35□□□□□ -1.87
PPP1R9A-201ENST00000289495 Q8NAQ8 132 aa3.35□□□□□ -1.87
PPP1R9A-201ENST00000289495 LECT2O14960 151 aa3.34□□□□□ -1.87
PPP1R9A-201ENST00000289495 GAGE2AQ6NT46 116 aa3.34□□□□□ -1.87
PPP1R9A-201ENST00000289495 S100A7L2Q5SY68 101 aa3.34□□□□□ -1.87
PPP1R9A-201ENST00000289495 FAM218AQ96MZ4 157 aa3.34□□□□□ -1.87
PPP1R9A-201ENST00000289495 KLK12Q9UKR0 248 aa3.34□□□□□ -1.87
PPP1R9A-201ENST00000289495 COX17Q14061 63 aa3.34□□□□□ -1.88
PPP1R9A-201ENST00000289495 DEFB121Q5J5C9 76 aa3.34□□□□□ -1.88
PPP1R9A-201ENST00000289495 Q6Q795 121 aa3.33□□□□□ -1.88
PPP1R9A-201ENST00000289495 ORMDL1Q9P0S3 153 aa3.33□□□□□ -1.88
PPP1R9A-201ENST00000289495 A0A087WYN8 130 aa3.33□□□□□ -1.88
PPP1R9A-201ENST00000289495 TMEM126AQ9H061 195 aa3.33□□□□□ -1.88
PPP1R9A-201ENST00000289495 NCR3O14931 201 aa3.32□□□□□ -1.88
PPP1R9A-201ENST00000289495 NDUFC2O95298 119 aa3.32□□□□□ -1.88
PPP1R9A-201ENST00000289495 WFDC9Q8NEX5 89 aa3.32□□□□□ -1.88
PPP1R9A-201ENST00000289495 MUC7Q8TAX7 377 aa3.32□□□□□ -1.88
PPP1R9A-201ENST00000289495 KMT2BQ9UMN6 2715 aaPredicted RBP3.32□□□□□ -1.88
PPP1R9A-201ENST00000289495 NDUFV3P56181 108 aaKnown RBP3.32□□□□□ -1.88
PPP1R9A-201ENST00000289495 LINC00643Q86TS7 51 aa3.32□□□□□ -1.88
PPP1R9A-201ENST00000289495 A0A1B0GX51 115 aa3.31□□□□□ -1.88
PPP1R9A-201ENST00000289495 ZNF561-AS1K7EIQ3 104 aa3.31□□□□□ -1.88
PPP1R9A-201ENST00000289495 KIAA0087Q14695 138 aa3.31□□□□□ -1.88
PPP1R9A-201ENST00000289495 C9orf116Q5BN46 136 aaPredicted RBP3.31□□□□□ -1.88
PPP1R9A-201ENST00000289495 C14orf132Q9NPU4 83 aa3.31□□□□□ -1.88
PPP1R9A-201ENST00000289495 KLK5Q9Y337 293 aaPredicted RBP3.31□□□□□ -1.88
PPP1R9A-201ENST00000289495 ANK3Q12955 4377 aaKnown RBP3.31□□□□□ -1.88
PPP1R9A-201ENST00000289495 NSD1Q96L73 2696 aaPredicted RBP3.3□□□□□ -1.88
PPP1R9A-201ENST00000289495 SLPIP03973 132 aa3.3□□□□□ -1.88
PPP1R9A-201ENST00000289495 KPRPQ5T749 579 aaPredicted RBP3.3□□□□□ -1.88
PPP1R9A-201ENST00000289495 UNQ6190/PRO20217Q6UXQ8 127 aa3.3□□□□□ -1.88
PPP1R9A-201ENST00000289495 LINC00526Q96FQ7 95 aa3.3□□□□□ -1.88
PPP1R9A-201ENST00000289495 RETNQ9HD89 108 aa3.3□□□□□ -1.88
PPP1R9A-201ENST00000289495 CYSRT1A8MQ03 144 aa3.3□□□□□ -1.88
PPP1R9A-201ENST00000289495 TRBV7-7A0A0K0K1E9 115 aa3.3□□□□□ -1.88
PPP1R9A-201ENST00000289495 PRR3P79522 188 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms