RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 C15orf53Q8NAA6 179 aa9.06□□□□□ -0.96
C9orf3-201ENST00000277198 RPL28P46779 137 aaKnown RBP9.06□□□□□ -0.96
C9orf3-201ENST00000277198 FHL2Q14192 279 aa9.06□□□□□ -0.96
C9orf3-201ENST00000277198 A0A0U1RRA0 63 aa9.05□□□□□ -0.96
C9orf3-201ENST00000277198 TRAV26-1A0A087WT03 109 aa9.04□□□□□ -0.96
C9orf3-201ENST00000277198 IGHV3OR16-9A0A0B4J2B5 98 aa9.04□□□□□ -0.96
C9orf3-201ENST00000277198 RPL35AP18077 110 aaKnown RBP9.04□□□□□ -0.96
C9orf3-201ENST00000277198 TTC32Q5I0X7 151 aa9.04□□□□□ -0.96
C9orf3-201ENST00000277198 A0A087WZ39 114 aa9.04□□□□□ -0.96
C9orf3-201ENST00000277198 IBA57-AS1B1ANH7 110 aa9.04□□□□□ -0.96
C9orf3-201ENST00000277198 KIR2DL5BQ8NHK3 375 aa9.04□□□□□ -0.96
C9orf3-201ENST00000277198 LOC100131303A0A0U1RQF7 123 aa9.03□□□□□ -0.96
C9orf3-201ENST00000277198 K7EIL1 84 aa9.03□□□□□ -0.96
C9orf3-201ENST00000277198 CRPP02741 224 aa9.03□□□□□ -0.96
C9orf3-201ENST00000277198 NDUFV3P56181 108 aaKnown RBP9.03□□□□□ -0.96
C9orf3-201ENST00000277198 MRAPQ8TCY5 172 aa9.03□□□□□ -0.96
C9orf3-201ENST00000277198 GAGE6Q13070 117 aa9.03□□□□□ -0.96
C9orf3-201ENST00000277198 LINC00612Q8N6U2 182 aa9.03□□□□□ -0.96
C9orf3-201ENST00000277198 EGFEM1PQ0D2K5 195 aa9.02□□□□□ -0.97
C9orf3-201ENST00000277198 MIR7-3HGQ8N6C7 128 aa9.02□□□□□ -0.97
C9orf3-201ENST00000277198 WFDC10AQ9H1F0 79 aa9.02□□□□□ -0.97
C9orf3-201ENST00000277198 COL7A1Q02388 2944 aa9.01□□□□□ -0.97
C9orf3-201ENST00000277198 TRBV7-7A0A0K0K1E9 115 aa9.01□□□□□ -0.97
C9orf3-201ENST00000277198 CHCHD5Q9BSY4 110 aa9.01□□□□□ -0.97
C9orf3-201ENST00000277198 IMUPQ9GZP8 106 aa9.01□□□□□ -0.97
C9orf3-201ENST00000277198 SND1-IT1Q9HBX3 110 aa9.01□□□□□ -0.97
C9orf3-201ENST00000277198 IGLV4-60A0A075B6I1 120 aa9.01□□□□□ -0.97
C9orf3-201ENST00000277198 BAALC-AS2P0C853 105 aa9.01□□□□□ -0.97
C9orf3-201ENST00000277198 A0A1B0GUV1 79 aa9□□□□□ -0.97
C9orf3-201ENST00000277198 H0YGX0 51 aa9□□□□□ -0.97
C9orf3-201ENST00000277198 NHLRC4P0CG21 123 aaPredicted RBP9□□□□□ -0.97
C9orf3-201ENST00000277198 INAFM2P0DMQ5 153 aa9□□□□□ -0.97
C9orf3-201ENST00000277198 LINC01561Q8N1V8 128 aa9□□□□□ -0.97
C9orf3-201ENST00000277198 IGKV2-28A0A075B6P5 120 aa8.99□□□□□ -0.97
C9orf3-201ENST00000277198 SMIM9A6NGZ8 99 aa8.99□□□□□ -0.97
C9orf3-201ENST00000277198 IGKV2D-28P01615 120 aa8.99□□□□□ -0.97
C9orf3-201ENST00000277198 LINC00158P58513 81 aa8.99□□□□□ -0.97
C9orf3-201ENST00000277198 LINC00337Q8N6G1 96 aa8.99□□□□□ -0.97
C9orf3-201ENST00000277198 TOMM7Q9P0U1 55 aa8.99□□□□□ -0.97
C9orf3-201ENST00000277198 LINC00959A0A1B0GUT2 108 aa8.98□□□□□ -0.97
C9orf3-201ENST00000277198 SDIM1Q6ZPB5 146 aa8.98□□□□□ -0.97
C9orf3-201ENST00000277198 C9orf66Q5T8R8 295 aa8.97□□□□□ -0.97
C9orf3-201ENST00000277198 FAM218AQ96MZ4 157 aa8.97□□□□□ -0.97
C9orf3-201ENST00000277198 DNAH9Q9NYC9 4486 aa8.97□□□□□ -0.97
C9orf3-201ENST00000277198 CCL18P55774 89 aa8.97□□□□□ -0.97
C9orf3-201ENST00000277198 LINC00643Q86TS7 51 aa8.97□□□□□ -0.97
C9orf3-201ENST00000277198 IGKV3OR2-268A0A0C4DH90 116 aa8.95□□□□□ -0.98
C9orf3-201ENST00000277198 MALP21145 153 aa8.95□□□□□ -0.98
C9orf3-201ENST00000277198 SS18Q15532 418 aa8.95□□□□□ -0.98
C9orf3-201ENST00000277198 C22orf24Q9Y442 160 aa8.95□□□□□ -0.98
C9orf3-201ENST00000277198 DNAL4O96015 105 aa8.95□□□□□ -0.98
C9orf3-201ENST00000277198 Q8IZM0 81 aa8.95□□□□□ -0.98
C9orf3-201ENST00000277198 SMIM11BQ8TCY0 68 aa8.95□□□□□ -0.98
C9orf3-201ENST00000277198 PRO0255Q9UI72 69 aa8.95□□□□□ -0.98
C9orf3-201ENST00000277198 GYPEP15421 78 aa8.94□□□□□ -0.98
C9orf3-201ENST00000277198 C6orf226Q5I0X4 101 aa8.94□□□□□ -0.98
C9orf3-201ENST00000277198 DEFB130BP0DP73 79 aa8.93□□□□□ -0.98
C9orf3-201ENST00000277198 DEFB130AP0DP74 79 aa8.93□□□□□ -0.98
C9orf3-201ENST00000277198 C5orf38Q86SI9 138 aa8.93□□□□□ -0.98
C9orf3-201ENST00000277198 LYRM9A8MSI8 78 aa8.92□□□□□ -0.98
C9orf3-201ENST00000277198 X6R8D5 127 aa8.92□□□□□ -0.98
C9orf3-201ENST00000277198 PAX4O43316 350 aa8.91□□□□□ -0.98
C9orf3-201ENST00000277198 CXCL5P42830 114 aa8.91□□□□□ -0.98
C9orf3-201ENST00000277198 COX17Q14061 63 aa8.91□□□□□ -0.98
C9orf3-201ENST00000277198 A0A1B0GX51 115 aa8.9□□□□□ -0.98
C9orf3-201ENST00000277198 PFN2P35080 140 aa8.9□□□□□ -0.98
C9orf3-201ENST00000277198 OBSCN-AS1Q96MR7 158 aa8.9□□□□□ -0.98
C9orf3-201ENST00000277198 Q9HAA7 133 aa8.9□□□□□ -0.98
C9orf3-201ENST00000277198 ATP5G1P05496 136 aa8.9□□□□□ -0.99
C9orf3-201ENST00000277198 A0A087WYN8 130 aa8.89□□□□□ -0.99
C9orf3-201ENST00000277198 NDUFC2O95298 119 aa8.89□□□□□ -0.99
C9orf3-201ENST00000277198 XCL1P47992 114 aa8.89□□□□□ -0.99
C9orf3-201ENST00000277198 B5MCH6 92 aa8.88□□□□□ -0.99
C9orf3-201ENST00000277198 CD164L2Q6UWJ8 174 aa8.88□□□□□ -0.99
C9orf3-201ENST00000277198 SMCR5Q8TEV8 140 aa8.88□□□□□ -0.99
C9orf3-201ENST00000277198 TENM3Q9P273 2699 aa8.87□□□□□ -0.99
C9orf3-201ENST00000277198 STAB2Q8WWQ8 2551 aa8.87□□□□□ -0.99
C9orf3-201ENST00000277198 IGHV4-28A0A0C4DH34 117 aa8.87□□□□□ -0.99
C9orf3-201ENST00000277198 CCDC179H3BU77 68 aa8.87□□□□□ -0.99
C9orf3-201ENST00000277198 MUC7Q8TAX7 377 aa8.87□□□□□ -0.99
C9orf3-201ENST00000277198 B9D2Q9BPU9 175 aa8.87□□□□□ -0.99
C9orf3-201ENST00000277198 HUWE1Q7Z6Z7 4374 aaKnown RBP8.87□□□□□ -0.99
C9orf3-201ENST00000277198 OR13C6PQ8NH95 151 aa8.86□□□□□ -0.99
C9orf3-201ENST00000277198 LECT2O14960 151 aa8.86□□□□□ -0.99
C9orf3-201ENST00000277198 GAGE2AQ6NT46 116 aa8.86□□□□□ -0.99
C9orf3-201ENST00000277198 KIAA0087Q14695 138 aa8.85□□□□□ -0.99
C9orf3-201ENST00000277198 LINC00167Q96N53 147 aa8.85□□□□□ -0.99
C9orf3-201ENST00000277198 KLK5Q9Y337 293 aaPredicted RBP8.85□□□□□ -0.99
C9orf3-201ENST00000277198 APOC4P55056 127 aa8.84□□□□□ -0.99
C9orf3-201ENST00000277198 CFAP161Q6P656 301 aa8.84□□□□□ -0.99
C9orf3-201ENST00000277198 ORMDL1Q9P0S3 153 aa8.84□□□□□ -0.99
C9orf3-201ENST00000277198 FAM236AA0A1B0GUQ0 79 aa8.84□□□□□ -0.99
C9orf3-201ENST00000277198 FAM236BA0A1B0GV22 79 aa8.84□□□□□ -0.99
C9orf3-201ENST00000277198 TMEM126AQ9H061 195 aa8.84□□□□□ -0.99
C9orf3-201ENST00000277198 NBEAL2Q6ZNJ1 2754 aa8.83□□□□□ -1
C9orf3-201ENST00000277198 LINC00269Q8N2A0 174 aa8.83□□□□□ -1
C9orf3-201ENST00000277198 CHCHD10Q8WYQ3 142 aaPredicted RBP8.83□□□□□ -1
C9orf3-201ENST00000277198 IGHV4-30-4P0DP06 118 aa8.82□□□□□ -1
C9orf3-201ENST00000277198 REG3AQ06141 175 aa8.82□□□□□ -1
C9orf3-201ENST00000277198 SS18L2Q9UHA2 77 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms