RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 RPL28P46779 137 aaKnown RBP8.3□□□□□ -1.08
CLSTN3-201ENST00000266546 NKAPP1Q8N9T2 125 aa8.29□□□□□ -1.08
CLSTN3-201ENST00000266546 CDC42SE2Q9NRR3 84 aa8.29□□□□□ -1.08
CLSTN3-201ENST00000266546 H3BQ85 93 aa8.29□□□□□ -1.08
CLSTN3-201ENST00000266546 FAM19A5Q7Z5A7 132 aaPredicted RBP8.29□□□□□ -1.08
CLSTN3-201ENST00000266546 IL17DQ8TAD2 202 aa8.29□□□□□ -1.08
CLSTN3-201ENST00000266546 IGKV2D-24A0A075B6R9 120 aa8.28□□□□□ -1.08
CLSTN3-201ENST00000266546 LOC107984640A0A0U1RRK4 108 aa8.28□□□□□ -1.08
CLSTN3-201ENST00000266546 F8WEM9 126 aa8.28□□□□□ -1.08
CLSTN3-201ENST00000266546 SPAG11BQ08648 103 aa8.28□□□□□ -1.08
CLSTN3-201ENST00000266546 NREPQ16612 68 aa8.28□□□□□ -1.08
CLSTN3-201ENST00000266546 ATMQ13315 3056 aa8.28□□□□□ -1.08
CLSTN3-201ENST00000266546 TRBV6-8A0A0A6YYG3 113 aa8.28□□□□□ -1.08
CLSTN3-201ENST00000266546 C6orf99Q4VX62 202 aa8.28□□□□□ -1.08
CLSTN3-201ENST00000266546 DIRC1Q969H9 104 aa8.27□□□□□ -1.09
CLSTN3-201ENST00000266546 FAM19A4Q96LR4 140 aa8.27□□□□□ -1.09
CLSTN3-201ENST00000266546 FLNAP21333 2647 aaKnown RBP8.27□□□□□ -1.09
CLSTN3-201ENST00000266546 DEFB105AQ8NG35 78 aa8.26□□□□□ -1.09
CLSTN3-201ENST00000266546 TRBV6-4A0A1B0GX49 114 aa8.26□□□□□ -1.09
CLSTN3-201ENST00000266546 LINC00482Q8N8I6 264 aa8.26□□□□□ -1.09
CLSTN3-201ENST00000266546 WFDC9Q8NEX5 89 aa8.26□□□□□ -1.09
CLSTN3-201ENST00000266546 RMI2Q96E14 147 aa8.26□□□□□ -1.09
CLSTN3-201ENST00000266546 IGLV1-51P01701 117 aa8.25□□□□□ -1.09
CLSTN3-201ENST00000266546 Q6ZSN1 163 aa8.25□□□□□ -1.09
CLSTN3-201ENST00000266546 PRO0255Q9UI72 69 aa8.25□□□□□ -1.09
CLSTN3-201ENST00000266546 A0A087WYN8 130 aa8.25□□□□□ -1.09
CLSTN3-201ENST00000266546 CAMK2N2Q96S95 79 aa8.25□□□□□ -1.09
CLSTN3-201ENST00000266546 FUSP35637 526 aaKnown RBP eCLIP8.25□□□□□ -1.09
CLSTN3-201ENST00000266546 KRTAP1-1Q07627 177 aa8.25□□□□□ -1.09
CLSTN3-201ENST00000266546 LINC00269Q8N2A0 174 aa8.24□□□□□ -1.09
CLSTN3-201ENST00000266546 BRK1Q8WUW1 75 aa8.24□□□□□ -1.09
CLSTN3-201ENST00000266546 NHLRC4P0CG21 123 aaPredicted RBP8.24□□□□□ -1.09
CLSTN3-201ENST00000266546 C11orf45Q8TAV5 145 aa8.24□□□□□ -1.09
CLSTN3-201ENST00000266546 LOC100131303A0A0U1RQF7 123 aa8.24□□□□□ -1.09
CLSTN3-201ENST00000266546 HRCT1Q6UXD1 115 aa8.24□□□□□ -1.09
CLSTN3-201ENST00000266546 WFDC10AQ9H1F0 79 aa8.24□□□□□ -1.09
CLSTN3-201ENST00000266546 SCXQ7RTU7 201 aa8.23□□□□□ -1.09
CLSTN3-201ENST00000266546 CSDC2Q9Y534 153 aaKnown RBP8.23□□□□□ -1.09
CLSTN3-201ENST00000266546 COL6A5A8TX70 2615 aa8.23□□□□□ -1.09
CLSTN3-201ENST00000266546 CCKP06307 115 aa8.23□□□□□ -1.09
CLSTN3-201ENST00000266546 CHD6Q8TD26 2715 aa8.23□□□□□ -1.09
CLSTN3-201ENST00000266546 IGHV4-28A0A0C4DH34 117 aa8.23□□□□□ -1.09
CLSTN3-201ENST00000266546 LINC00846Q9NV44 126 aa8.23□□□□□ -1.09
CLSTN3-201ENST00000266546 ODF3L2Q3SX64 289 aa8.22□□□□□ -1.09
CLSTN3-201ENST00000266546 HIGD2BQ4VC39 106 aa8.22□□□□□ -1.09
CLSTN3-201ENST00000266546 CR1P17927 2039 aa8.22□□□□□ -1.09
CLSTN3-201ENST00000266546 NBEAL1Q6ZS30 2694 aa8.22□□□□□ -1.09
CLSTN3-201ENST00000266546 CHCHD10Q8WYQ3 142 aaPredicted RBP8.22□□□□□ -1.09
CLSTN3-201ENST00000266546 KLK12Q9UKR0 248 aa8.22□□□□□ -1.09
CLSTN3-201ENST00000266546 SNURFQ9Y675 71 aa8.22□□□□□ -1.09
CLSTN3-201ENST00000266546 COX7BP24311 80 aa8.21□□□□□ -1.09
CLSTN3-201ENST00000266546 LINC00959A0A1B0GUT2 108 aa8.21□□□□□ -1.09
CLSTN3-201ENST00000266546 ZZEF1O43149 2961 aa8.21□□□□□ -1.1
CLSTN3-201ENST00000266546 REG3AQ06141 175 aa8.21□□□□□ -1.1
CLSTN3-201ENST00000266546 LINC00337Q8N6G1 96 aa8.21□□□□□ -1.1
CLSTN3-201ENST00000266546 IGLV5-39A0A0G2JS06 123 aa8.2□□□□□ -1.1
CLSTN3-201ENST00000266546 Q6ZQY7 126 aa8.2□□□□□ -1.1
CLSTN3-201ENST00000266546 CFAP47Q6ZTR5 3102 aa8.2□□□□□ -1.1
CLSTN3-201ENST00000266546 BEAN1Q3B7T3 259 aa8.19□□□□□ -1.1
CLSTN3-201ENST00000266546 FLNCQ14315 2725 aa8.19□□□□□ -1.1
CLSTN3-201ENST00000266546 LITAFQ99732 161 aa8.19□□□□□ -1.1
CLSTN3-201ENST00000266546 CRYGAP11844 174 aa8.19□□□□□ -1.1
CLSTN3-201ENST00000266546 MUC4Q99102 2169 aa8.18□□□□□ -1.1
CLSTN3-201ENST00000266546 BPY2O14599 106 aa8.18□□□□□ -1.1
CLSTN3-201ENST00000266546 PKIGQ9Y2B9 76 aa8.18□□□□□ -1.1
CLSTN3-201ENST00000266546 MPLKIPQ8TAP9 179 aa8.18□□□□□ -1.1
CLSTN3-201ENST00000266546 NDUFC2-KCTD14E9PQ53 114 aa8.18□□□□□ -1.1
CLSTN3-201ENST00000266546 KIR2DL5BQ8NHK3 375 aa8.18□□□□□ -1.1
CLSTN3-201ENST00000266546 Q9UF83 564 aa8.18□□□□□ -1.1
CLSTN3-201ENST00000266546 TEX15Q9BXT5 2789 aa8.18□□□□□ -1.1
CLSTN3-201ENST00000266546 A0A087WZ39 114 aa8.18□□□□□ -1.1
CLSTN3-201ENST00000266546 NDUFC1O43677 76 aa8.17□□□□□ -1.1
CLSTN3-201ENST00000266546 SOSTDC1Q6X4U4 206 aa8.17□□□□□ -1.1
CLSTN3-201ENST00000266546 Q8N814 137 aa8.17□□□□□ -1.1
CLSTN3-201ENST00000266546 Q8IZM0 81 aa8.17□□□□□ -1.1
CLSTN3-201ENST00000266546 KALRNO60229 2985 aa8.17□□□□□ -1.1
CLSTN3-201ENST00000266546 COL12A1Q99715 3063 aa8.17□□□□□ -1.1
CLSTN3-201ENST00000266546 IGLV4-60A0A075B6I1 120 aa8.17□□□□□ -1.1
CLSTN3-201ENST00000266546 NTM-AS1Q6ZSK4 140 aa8.17□□□□□ -1.1
CLSTN3-201ENST00000266546 FAM218AQ96MZ4 157 aa8.17□□□□□ -1.1
CLSTN3-201ENST00000266546 XAGE1AQ9HD64 81 aa8.17□□□□□ -1.1
CLSTN3-201ENST00000266546 LY6G6CO95867 125 aa8.16□□□□□ -1.1
CLSTN3-201ENST00000266546 TRAV7A0A075B6U4 112 aa8.16□□□□□ -1.1
CLSTN3-201ENST00000266546 ETDCA0A1B0GVM5 59 aa8.16□□□□□ -1.1
CLSTN3-201ENST00000266546 FAM19A1Q7Z5A9 133 aa8.16□□□□□ -1.1
CLSTN3-201ENST00000266546 IGLV5-45A0A087WSX0 123 aa8.16□□□□□ -1.1
CLSTN3-201ENST00000266546 UBE2BP63146 152 aa8.16□□□□□ -1.1
CLSTN3-201ENST00000266546 CD164L2Q6UWJ8 174 aa8.16□□□□□ -1.1
CLSTN3-201ENST00000266546 C1orf158Q8N1D5 194 aa8.16□□□□□ -1.1
CLSTN3-201ENST00000266546 DEFB131BA0A096LNP1 70 aa8.15□□□□□ -1.1
CLSTN3-201ENST00000266546 PRR3P79522 188 aaKnown RBP8.15□□□□□ -1.1
CLSTN3-201ENST00000266546 ZNF575Q86XF7 245 aa8.15□□□□□ -1.11
CLSTN3-201ENST00000266546 LRBAP50851 2863 aa8.15□□□□□ -1.11
CLSTN3-201ENST00000266546 TACC2O95359 2948 aa8.15□□□□□ -1.11
CLSTN3-201ENST00000266546 SMIM26A0A096LP01 95 aa8.14□□□□□ -1.11
CLSTN3-201ENST00000266546 A0A0U1RQV1 116 aa8.14□□□□□ -1.11
CLSTN3-201ENST00000266546 LYRM9A8MSI8 78 aa8.14□□□□□ -1.11
CLSTN3-201ENST00000266546 A8MTW9 85 aa8.14□□□□□ -1.11
CLSTN3-201ENST00000266546 SERP1Q9Y6X1 66 aa8.14□□□□□ -1.11
CLSTN3-201ENST00000266546 ATP5EP56381 51 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms