RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 IGKV2D-28P01615 120 aa6.27□□□□□ -1.41
VAPB-201ENST00000265619 C5orf56Q8N8D9 126 aa6.27□□□□□ -1.41
VAPB-201ENST00000265619 OBSCN-AS1Q96MR7 158 aa6.27□□□□□ -1.41
VAPB-201ENST00000265619 ATRQ13535 2644 aa6.26□□□□□ -1.41
VAPB-201ENST00000265619 RBMY1BA6NDE4 496 aaKnown RBP6.26□□□□□ -1.41
VAPB-201ENST00000265619 RBMY1EA6NEQ0 496 aaKnown RBP6.26□□□□□ -1.41
VAPB-201ENST00000265619 RBMY1DP0C7P1 496 aaKnown RBP6.26□□□□□ -1.41
VAPB-201ENST00000265619 RBMY1A1P0DJD3 496 aaKnown RBP6.26□□□□□ -1.41
VAPB-201ENST00000265619 RBMY1CP0DJD4 496 aa6.26□□□□□ -1.41
VAPB-201ENST00000265619 RBMY1FQ15415 496 aaKnown RBP6.26□□□□□ -1.41
VAPB-201ENST00000265619 FAM229BQ4G0N7 80 aa6.26□□□□□ -1.41
VAPB-201ENST00000265619 C11orf72Q8NBR9 251 aa6.26□□□□□ -1.41
VAPB-201ENST00000265619 SERP1Q9Y6X1 66 aa6.26□□□□□ -1.41
VAPB-201ENST00000265619 SMIM11BQ8TCY0 68 aa6.26□□□□□ -1.41
VAPB-201ENST00000265619 IGHV4-31P0DP07 118 aa6.25□□□□□ -1.41
VAPB-201ENST00000265619 PSMB8P28062 276 aa6.25□□□□□ -1.41
VAPB-201ENST00000265619 MIR7-3HGQ8N6C7 128 aa6.25□□□□□ -1.41
VAPB-201ENST00000265619 LECT2O14960 151 aa6.25□□□□□ -1.41
VAPB-201ENST00000265619 CR1P17927 2039 aa6.25□□□□□ -1.41
VAPB-201ENST00000265619 IGHV3OR16-12A0A075B7B8 117 aa6.24□□□□□ -1.41
VAPB-201ENST00000265619 DEFB136Q30KP8 78 aa6.24□□□□□ -1.41
VAPB-201ENST00000265619 DSCR9P59020 149 aa6.24□□□□□ -1.41
VAPB-201ENST00000265619 SPINK13Q1W4C9 94 aa6.24□□□□□ -1.41
VAPB-201ENST00000265619 TRAV10A0A0B4J240 114 aa6.23□□□□□ -1.41
VAPB-201ENST00000265619 SMIM1B2RUZ4 78 aa6.23□□□□□ -1.41
VAPB-201ENST00000265619 Q6ZTI0 123 aa6.23□□□□□ -1.41
VAPB-201ENST00000265619 IGLV5-39A0A0G2JS06 123 aa6.23□□□□□ -1.41
VAPB-201ENST00000265619 NDUFC2-KCTD14E9PQ53 114 aa6.23□□□□□ -1.41
VAPB-201ENST00000265619 LINC00242Q5T6M2 205 aa6.23□□□□□ -1.41
VAPB-201ENST00000265619 F8WEM9 126 aa6.23□□□□□ -1.41
VAPB-201ENST00000265619 OTOGQ6ZRI0 2925 aa6.22□□□□□ -1.41
VAPB-201ENST00000265619 M0R2N4 97 aa6.22□□□□□ -1.41
VAPB-201ENST00000265619 RHPN1-AS1Q9BWJ2 59 aa6.22□□□□□ -1.41
VAPB-201ENST00000265619 IGLV5-45A0A087WSX0 123 aa6.22□□□□□ -1.41
VAPB-201ENST00000265619 HIVEP1P15822 2718 aa6.21□□□□□ -1.42
VAPB-201ENST00000265619 TRBV7-6A0A0J9YX20 115 aa6.21□□□□□ -1.42
VAPB-201ENST00000265619 SERTAD4-AS1Q5TG53 156 aa6.21□□□□□ -1.42
VAPB-201ENST00000265619 MPLKIPQ8TAP9 179 aa6.21□□□□□ -1.42
VAPB-201ENST00000265619 IGKV3OR2-268A0A0C4DH90 116 aa6.21□□□□□ -1.42
VAPB-201ENST00000265619 CCKP06307 115 aa6.21□□□□□ -1.42
VAPB-201ENST00000265619 RPL36AP83881 106 aaKnown RBP6.21□□□□□ -1.42
VAPB-201ENST00000265619 RPL36ALQ969Q0 106 aaKnown RBP6.21□□□□□ -1.42
VAPB-201ENST00000265619 A6NDX4 124 aa6.2□□□□□ -1.42
VAPB-201ENST00000265619 KLK9Q2XQG4 91 aa6.2□□□□□ -1.42
VAPB-201ENST00000265619 C18orf65Q6ZTR6 163 aa6.2□□□□□ -1.42
VAPB-201ENST00000265619 PDZD2O15018 2839 aa6.2□□□□□ -1.42
VAPB-201ENST00000265619 IGHV1OR15-1A0A075B7D0 117 aa6.19□□□□□ -1.42
VAPB-201ENST00000265619 SMIM26A0A096LP01 95 aa6.19□□□□□ -1.42
VAPB-201ENST00000265619 CRPP02741 224 aa6.19□□□□□ -1.42
VAPB-201ENST00000265619 RNASE1P07998 156 aaKnown RBP6.19□□□□□ -1.42
VAPB-201ENST00000265619 BAHCC1Q9P281 2608 aa6.19□□□□□ -1.42
VAPB-201ENST00000265619 SND1-IT1Q9HBX3 110 aa6.18□□□□□ -1.42
VAPB-201ENST00000265619 MAST4O15021 2626 aa6.18□□□□□ -1.42
VAPB-201ENST00000265619 RBM3P98179 157 aaKnown RBP6.18□□□□□ -1.42
VAPB-201ENST00000265619 TOMM7Q9P0U1 55 aa6.18□□□□□ -1.42
VAPB-201ENST00000265619 A0A096LNT2 108 aa6.17□□□□□ -1.42
VAPB-201ENST00000265619 NDUFA4O00483 81 aa6.17□□□□□ -1.42
VAPB-201ENST00000265619 SPATA3Q8NHX4 192 aa6.17□□□□□ -1.42
VAPB-201ENST00000265619 C11orf45Q8TAV5 145 aa6.17□□□□□ -1.42
VAPB-201ENST00000265619 TRAV13-2A0A0B4J235 113 aa6.16□□□□□ -1.42
VAPB-201ENST00000265619 CCL18P55774 89 aa6.16□□□□□ -1.42
VAPB-201ENST00000265619 KLKP1Q107X0 134 aa6.16□□□□□ -1.42
VAPB-201ENST00000265619 CD164L2Q6UWJ8 174 aa6.16□□□□□ -1.42
VAPB-201ENST00000265619 TM2D3Q9BRN9 247 aa6.16□□□□□ -1.42
VAPB-201ENST00000265619 CFHR3Q02985 330 aa6.16□□□□□ -1.42
VAPB-201ENST00000265619 C19orf54Q5BKX5 351 aa6.16□□□□□ -1.42
VAPB-201ENST00000265619 SLURP1P55000 103 aa6.16□□□□□ -1.42
VAPB-201ENST00000265619 PRR3P79522 188 aaKnown RBP6.16□□□□□ -1.42
VAPB-201ENST00000265619 KRTAP1-3Q8IUG1 177 aa6.15□□□□□ -1.42
VAPB-201ENST00000265619 ORMDL1Q9P0S3 153 aa6.15□□□□□ -1.42
VAPB-201ENST00000265619 NSD1Q96L73 2696 aaPredicted RBP6.15□□□□□ -1.42
VAPB-201ENST00000265619 TRAV7A0A075B6U4 112 aa6.15□□□□□ -1.43
VAPB-201ENST00000265619 C11orf68Q9H3H3 251 aaKnown RBP6.15□□□□□ -1.43
VAPB-201ENST00000265619 NBEAL2Q6ZNJ1 2754 aa6.14□□□□□ -1.43
VAPB-201ENST00000265619 A0A087WZ39 114 aa6.14□□□□□ -1.43
VAPB-201ENST00000265619 DNAJC9-AS1A6NH13 148 aa6.14□□□□□ -1.43
VAPB-201ENST00000265619 COPS9Q8WXC6 57 aa6.14□□□□□ -1.43
VAPB-201ENST00000265619 Q6YL49 198 aa6.13□□□□□ -1.43
VAPB-201ENST00000265619 SCXQ7RTU7 201 aa6.13□□□□□ -1.43
VAPB-201ENST00000265619 STAB1Q9NY15 2570 aa6.13□□□□□ -1.43
VAPB-201ENST00000265619 LINC00158P58513 81 aa6.13□□□□□ -1.43
VAPB-201ENST00000265619 APOC4P55056 127 aa6.13□□□□□ -1.43
VAPB-201ENST00000265619 NTM-AS1Q6ZSK4 140 aa6.13□□□□□ -1.43
VAPB-201ENST00000265619 INAFM1C9JVW0 142 aa6.12□□□□□ -1.43
VAPB-201ENST00000265619 IGHV3-53P01767 116 aa6.12□□□□□ -1.43
VAPB-201ENST00000265619 S100A7L2Q5SY68 101 aa6.12□□□□□ -1.43
VAPB-201ENST00000265619 ESM1Q9NQ30 184 aa6.12□□□□□ -1.43
VAPB-201ENST00000265619 K7EQG2 157 aa6.12□□□□□ -1.43
VAPB-201ENST00000265619 ZNF702PQ9H963 129 aa6.12□□□□□ -1.43
VAPB-201ENST00000265619 LINC01547P58512 204 aaPredicted RBP6.12□□□□□ -1.43
VAPB-201ENST00000265619 SNRPD3P62318 126 aaKnown RBP6.12□□□□□ -1.43
VAPB-201ENST00000265619 H0YGX0 51 aa6.11□□□□□ -1.43
VAPB-201ENST00000265619 TENM1Q9UKZ4 2725 aa6.11□□□□□ -1.43
VAPB-201ENST00000265619 LRCOL1A6NCL2 159 aa6.11□□□□□ -1.43
VAPB-201ENST00000265619 PAX4O43316 350 aa6.11□□□□□ -1.43
VAPB-201ENST00000265619 NANOS2P60321 138 aaKnown RBP6.11□□□□□ -1.43
VAPB-201ENST00000265619 HAMPP81172 84 aa6.11□□□□□ -1.43
VAPB-201ENST00000265619 DYNLRB2Q8TF09 96 aa6.11□□□□□ -1.43
VAPB-201ENST00000265619 USMG5Q96IX5 58 aa6.11□□□□□ -1.43
VAPB-201ENST00000265619 LAMTOR3Q9UHA4 124 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms