RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 NTM-AS1Q6ZSK4 140 aa12.73□□□□□ -0.37
NOTCH3-201ENST00000263388 Q8N814 137 aa12.73□□□□□ -0.37
NOTCH3-201ENST00000263388 POM121L12Q8N7R1 296 aa12.72□□□□□ -0.37
NOTCH3-201ENST00000263388 C11orf21Q9P2W6 132 aa12.71□□□□□ -0.37
NOTCH3-201ENST00000263388 VPREB1P12018 145 aa12.71□□□□□ -0.38
NOTCH3-201ENST00000263388 LINC00208Q96KT6 92 aa12.7□□□□□ -0.38
NOTCH3-201ENST00000263388 CELA1Q9UNI1 258 aa12.7□□□□□ -0.38
NOTCH3-201ENST00000263388 DNAH12Q6ZR08 3092 aa12.7□□□□□ -0.38
NOTCH3-201ENST00000263388 RPL28P46779 137 aaKnown RBP12.7□□□□□ -0.38
NOTCH3-201ENST00000263388 CYSRT1A8MQ03 144 aa12.7□□□□□ -0.38
NOTCH3-201ENST00000263388 PSPHP1O15172 72 aa12.7□□□□□ -0.38
NOTCH3-201ENST00000263388 CSDC2Q9Y534 153 aaKnown RBP12.69□□□□□ -0.38
NOTCH3-201ENST00000263388 SOSTDC1Q6X4U4 206 aa12.68□□□□□ -0.38
NOTCH3-201ENST00000263388 POLQO75417 2590 aa12.68□□□□□ -0.38
NOTCH3-201ENST00000263388 ZNF843Q8N446 348 aa12.68□□□□□ -0.38
NOTCH3-201ENST00000263388 LINC01006Q8NI28 216 aa12.68□□□□□ -0.38
NOTCH3-201ENST00000263388 REG3GQ6UW15 175 aa12.68□□□□□ -0.38
NOTCH3-201ENST00000263388 C1orf137Q5JT78 98 aa12.67□□□□□ -0.38
NOTCH3-201ENST00000263388 GAS8-AS1O95177 125 aa12.66□□□□□ -0.38
NOTCH3-201ENST00000263388 LINC01547P58512 204 aaPredicted RBP12.66□□□□□ -0.38
NOTCH3-201ENST00000263388 IGLV2-18A0A075B6J9 118 aa12.65□□□□□ -0.38
NOTCH3-201ENST00000263388 LY6G6DO95868 133 aa12.65□□□□□ -0.38
NOTCH3-201ENST00000263388 C18orf65Q6ZTR6 163 aa12.65□□□□□ -0.38
NOTCH3-201ENST00000263388 LIMD2Q9BT23 127 aa12.65□□□□□ -0.38
NOTCH3-201ENST00000263388 CHCHD7Q9BUK0 85 aa12.65□□□□□ -0.38
NOTCH3-201ENST00000263388 LINC00242Q5T6M2 205 aa12.65□□□□□ -0.38
NOTCH3-201ENST00000263388 X6R8D5 127 aa12.65□□□□□ -0.38
NOTCH3-201ENST00000263388 TRBV7-7A0A0K0K1E9 115 aa12.65□□□□□ -0.39
NOTCH3-201ENST00000263388 SERTAD4-AS1Q5TG53 156 aa12.64□□□□□ -0.39
NOTCH3-201ENST00000263388 EGFEM1PQ0D2K5 195 aa12.64□□□□□ -0.39
NOTCH3-201ENST00000263388 PRM2P04554 102 aa12.64□□□□□ -0.39
NOTCH3-201ENST00000263388 SMIM1B2RUZ4 78 aa12.63□□□□□ -0.39
NOTCH3-201ENST00000263388 H0Y9P7 68 aa12.63□□□□□ -0.39
NOTCH3-201ENST00000263388 CIRBP-AS1Q8TBR5 109 aa12.63□□□□□ -0.39
NOTCH3-201ENST00000263388 F8WDY8 70 aa12.63□□□□□ -0.39
NOTCH3-201ENST00000263388 IGHV6-1A0A0B4J1U7 121 aa12.62□□□□□ -0.39
NOTCH3-201ENST00000263388 hDV103S1A0JD37 113 aa12.61□□□□□ -0.39
NOTCH3-201ENST00000263388 Q8N3U1 123 aa12.61□□□□□ -0.39
NOTCH3-201ENST00000263388 NANOS2P60321 138 aaKnown RBP12.61□□□□□ -0.39
NOTCH3-201ENST00000263388 FASNP49327 2511 aaKnown RBP12.6□□□□□ -0.39
NOTCH3-201ENST00000263388 COX6A2Q02221 97 aa12.6□□□□□ -0.39
NOTCH3-201ENST00000263388 TRBV10-3A0A0K0K1G6 114 aa12.59□□□□□ -0.39
NOTCH3-201ENST00000263388 COX8CQ7Z4L0 72 aa12.59□□□□□ -0.39
NOTCH3-201ENST00000263388 M0R2N4 97 aa12.58□□□□□ -0.4
NOTCH3-201ENST00000263388 CRYGAP11844 174 aa12.58□□□□□ -0.4
NOTCH3-201ENST00000263388 UNQ6190/PRO20217Q6UXQ8 127 aa12.58□□□□□ -0.4
NOTCH3-201ENST00000263388 NUPR2A6NF83 97 aa12.58□□□□□ -0.4
NOTCH3-201ENST00000263388 AMELXQ99217 191 aa12.58□□□□□ -0.4
NOTCH3-201ENST00000263388 A0A087WYN8 130 aa12.58□□□□□ -0.4
NOTCH3-201ENST00000263388 CXCL6P80162 114 aa12.57□□□□□ -0.4
NOTCH3-201ENST00000263388 LINC00310P59036 64 aa12.56□□□□□ -0.4
NOTCH3-201ENST00000263388 HCG22E2RYF7 251 aa12.56□□□□□ -0.4
NOTCH3-201ENST00000263388 CRIP2P52943 208 aaPredicted RBP12.56□□□□□ -0.4
NOTCH3-201ENST00000263388 PRO0628Q9UI54 55 aa12.56□□□□□ -0.4
NOTCH3-201ENST00000263388 A0A1B0GUV1 79 aa12.56□□□□□ -0.4
NOTCH3-201ENST00000263388 C9orf116Q5BN46 136 aaPredicted RBP12.56□□□□□ -0.4
NOTCH3-201ENST00000263388 LINC00575Q6W349 94 aa12.55□□□□□ -0.4
NOTCH3-201ENST00000263388 BEAN1Q3B7T3 259 aa12.54□□□□□ -0.4
NOTCH3-201ENST00000263388 SPAG11AQ6PDA7 123 aa12.54□□□□□ -0.4
NOTCH3-201ENST00000263388 BRI3O95415 125 aa12.53□□□□□ -0.4
NOTCH3-201ENST00000263388 LY6G6CO95867 125 aa12.53□□□□□ -0.4
NOTCH3-201ENST00000263388 TMEM254Q8TBM7 123 aa12.53□□□□□ -0.4
NOTCH3-201ENST00000263388 ADAMTSL4-AS1Q5T5F5 129 aa12.52□□□□□ -0.4
NOTCH3-201ENST00000263388 LINC01561Q8N1V8 128 aa12.52□□□□□ -0.41
NOTCH3-201ENST00000263388 URB1-AS1Q96HZ7 61 aa12.51□□□□□ -0.41
NOTCH3-201ENST00000263388 PRR3P79522 188 aaKnown RBP12.51□□□□□ -0.41
NOTCH3-201ENST00000263388 TSPEAR-AS2P59090 65 aa12.51□□□□□ -0.41
NOTCH3-201ENST00000263388 ODF3L2Q3SX64 289 aa12.51□□□□□ -0.41
NOTCH3-201ENST00000263388 Q9BRP9 147 aa12.51□□□□□ -0.41
NOTCH3-201ENST00000263388 IGLV1-51P01701 117 aa12.51□□□□□ -0.41
NOTCH3-201ENST00000263388 ZNF580Q9UK33 172 aa12.5□□□□□ -0.41
NOTCH3-201ENST00000263388 SPINK1P00995 79 aa12.49□□□□□ -0.41
NOTCH3-201ENST00000263388 FHL2Q14192 279 aa12.49□□□□□ -0.41
NOTCH3-201ENST00000263388 C6orf223Q8N319 242 aa12.49□□□□□ -0.41
NOTCH3-201ENST00000263388 PCOTHQ58A44 107 aa12.48□□□□□ -0.41
NOTCH3-201ENST00000263388 FLG2Q5D862 2391 aaPredicted RBP12.48□□□□□ -0.41
NOTCH3-201ENST00000263388 IGLV4-60A0A075B6I1 120 aa12.48□□□□□ -0.41
NOTCH3-201ENST00000263388 A0A087WVE0 104 aa12.47□□□□□ -0.41
NOTCH3-201ENST00000263388 C2orf48Q96LS8 159 aa12.46□□□□□ -0.41
NOTCH3-201ENST00000263388 SBSPONQ8IVN8 264 aa12.46□□□□□ -0.41
NOTCH3-201ENST00000263388 A0A1B0GU69 56 aa12.46□□□□□ -0.41
NOTCH3-201ENST00000263388 TP53AIP1Q9HCN2 124 aa12.46□□□□□ -0.41
NOTCH3-201ENST00000263388 C7orf65Q6ZTY9 151 aa12.45□□□□□ -0.42
NOTCH3-201ENST00000263388 IGLV5-52A0A0A0MRZ9 124 aa12.45□□□□□ -0.42
NOTCH3-201ENST00000263388 OXLD1Q5BKU9 147 aa12.44□□□□□ -0.42
NOTCH3-201ENST00000263388 C1orf64Q8NEQ6 169 aa12.43□□□□□ -0.42
NOTCH3-201ENST00000263388 ACYP2P14621 99 aa12.42□□□□□ -0.42
NOTCH3-201ENST00000263388 RETNLBQ9BQ08 111 aa12.42□□□□□ -0.42
NOTCH3-201ENST00000263388 EDN2P20800 178 aa12.42□□□□□ -0.42
NOTCH3-201ENST00000263388 AVPP01185 164 aa12.39□□□□□ -0.43
NOTCH3-201ENST00000263388 PLA2G2AP14555 144 aa12.39□□□□□ -0.43
NOTCH3-201ENST00000263388 C16orf95Q9H693 158 aa12.39□□□□□ -0.43
NOTCH3-201ENST00000263388 LINC01546A6NGU7 62 aa12.38□□□□□ -0.43
NOTCH3-201ENST00000263388 A0A087WSZ3 146 aa12.38□□□□□ -0.43
NOTCH3-201ENST00000263388 A0A096LNJ9 63 aa12.38□□□□□ -0.43
NOTCH3-201ENST00000263388 LINC01556Q5JQF7 62 aa12.38□□□□□ -0.43
NOTCH3-201ENST00000263388 Q6ZTC4 211 aa12.38□□□□□ -0.43
NOTCH3-201ENST00000263388 C8orf87E5RJ46 101 aa12.38□□□□□ -0.43
NOTCH3-201ENST00000263388 CDSNQ15517 529 aa12.38□□□□□ -0.43
NOTCH3-201ENST00000263388 PRO3102Q9H379 93 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms