RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 PTPN13Q12923 2485 aa10.55□□□□□ -0.72
CCDC6-201ENST00000263102 SORL1Q92673 2214 aa10.54□□□□□ -0.72
CCDC6-201ENST00000263102 TRBV7-7A0A0K0K1E9 115 aa10.54□□□□□ -0.72
CCDC6-201ENST00000263102 PMAIP1Q13794 54 aa10.54□□□□□ -0.72
CCDC6-201ENST00000263102 ARHGAP21Q5T5U3 1957 aa10.54□□□□□ -0.72
CCDC6-201ENST00000263102 A0A087WVE0 104 aa10.53□□□□□ -0.72
CCDC6-201ENST00000263102 ZNF295-AS1Q8N0V1 137 aa10.53□□□□□ -0.72
CCDC6-201ENST00000263102 COL4A4P53420 1690 aaPredicted RBP10.53□□□□□ -0.72
CCDC6-201ENST00000263102 ATP11AUNQ6ZP68 121 aa10.52□□□□□ -0.73
CCDC6-201ENST00000263102 Q8N2B8 174 aa10.52□□□□□ -0.73
CCDC6-201ENST00000263102 PRRC2AP48634 2157 aaKnown RBP10.52□□□□□ -0.73
CCDC6-201ENST00000263102 PLXNB3Q9ULL4 1909 aa10.52□□□□□ -0.73
CCDC6-201ENST00000263102 Q6ZSN1 163 aa10.52□□□□□ -0.73
CCDC6-201ENST00000263102 MED12LQ86YW9 2145 aa10.51□□□□□ -0.73
CCDC6-201ENST00000263102 C1orf195Q5TG92 126 aa10.51□□□□□ -0.73
CCDC6-201ENST00000263102 PHF5AQ7RTV0 110 aaKnown RBP10.5□□□□□ -0.73
CCDC6-201ENST00000263102 CCDC179H3BU77 68 aa10.49□□□□□ -0.73
CCDC6-201ENST00000263102 SONP18583 2426 aaKnown RBP10.49□□□□□ -0.73
CCDC6-201ENST00000263102 F8WDY8 70 aa10.49□□□□□ -0.73
CCDC6-201ENST00000263102 Q96NJ1 140 aa10.49□□□□□ -0.73
CCDC6-201ENST00000263102 COX7CP15954 63 aa10.48□□□□□ -0.73
CCDC6-201ENST00000263102 C1orf64Q8NEQ6 169 aa10.48□□□□□ -0.73
CCDC6-201ENST00000263102 HIVEP3Q5T1R4 2406 aa10.48□□□□□ -0.73
CCDC6-201ENST00000263102 RPL37AP61513 92 aaKnown RBP10.48□□□□□ -0.73
CCDC6-201ENST00000263102 TANC2Q9HCD6 1990 aa10.48□□□□□ -0.73
CCDC6-201ENST00000263102 IGLV8-61A0A075B6I0 122 aa10.48□□□□□ -0.73
CCDC6-201ENST00000263102 WWC2-AS2Q96NR7 200 aa10.48□□□□□ -0.73
CCDC6-201ENST00000263102 LINC00315P59091 139 aa10.47□□□□□ -0.73
CCDC6-201ENST00000263102 TRAV7A0A075B6U4 112 aa10.47□□□□□ -0.73
CCDC6-201ENST00000263102 ACYP2P14621 99 aa10.47□□□□□ -0.73
CCDC6-201ENST00000263102 KRTAP24-1Q3LI83 254 aa10.47□□□□□ -0.73
CCDC6-201ENST00000263102 A0A1B0GU69 56 aa10.46□□□□□ -0.73
CCDC6-201ENST00000263102 Q8N3U1 123 aa10.46□□□□□ -0.73
CCDC6-201ENST00000263102 FREM1Q5H8C1 2179 aa10.45□□□□□ -0.74
CCDC6-201ENST00000263102 ZNF580Q9UK33 172 aa10.45□□□□□ -0.74
CCDC6-201ENST00000263102 A0A1W2PPR1 153 aa10.45□□□□□ -0.74
CCDC6-201ENST00000263102 PRR14LQ5THK1 2151 aa10.45□□□□□ -0.74
CCDC6-201ENST00000263102 KIAA1549Q9HCM3 1950 aa10.45□□□□□ -0.74
CCDC6-201ENST00000263102 IGIPA6NJ69 53 aa10.45□□□□□ -0.74
CCDC6-201ENST00000263102 ALPK3Q96L96 1907 aa10.44□□□□□ -0.74
CCDC6-201ENST00000263102 KIAA0087Q14695 138 aa10.44□□□□□ -0.74
CCDC6-201ENST00000263102 CSPG4Q6UVK1 2322 aa10.43□□□□□ -0.74
CCDC6-201ENST00000263102 Q6ZRP5 223 aa10.43□□□□□ -0.74
CCDC6-201ENST00000263102 EXPH5Q8NEV8 1989 aa10.43□□□□□ -0.74
CCDC6-201ENST00000263102 LINC00313P59037 77 aa10.43□□□□□ -0.74
CCDC6-201ENST00000263102 CUL9Q8IWT3 2517 aa10.42□□□□□ -0.74
CCDC6-201ENST00000263102 BDP1A6H8Y1 2624 aa10.42□□□□□ -0.74
CCDC6-201ENST00000263102 ADAMTSL4-AS1Q5T5F5 129 aa10.41□□□□□ -0.74
CCDC6-201ENST00000263102 LINC00167Q96N53 147 aa10.41□□□□□ -0.74
CCDC6-201ENST00000263102 NBDYA0A0U1RRE5 68 aa10.41□□□□□ -0.74
CCDC6-201ENST00000263102 CRIP3Q6Q6R5 217 aa10.41□□□□□ -0.74
CCDC6-201ENST00000263102 IMUPQ9GZP8 106 aa10.4□□□□□ -0.74
CCDC6-201ENST00000263102 SMIM26A0A096LP01 95 aa10.4□□□□□ -0.75
CCDC6-201ENST00000263102 TSPEAR-AS2P59090 65 aa10.4□□□□□ -0.75
CCDC6-201ENST00000263102 NUP210LQ5VU65 1888 aa10.39□□□□□ -0.75
CCDC6-201ENST00000263102 A0A1B0GUV1 79 aa10.39□□□□□ -0.75
CCDC6-201ENST00000263102 CDIP1Q9H305 208 aa10.39□□□□□ -0.75
CCDC6-201ENST00000263102 SMIM29Q86T20 159 aa10.39□□□□□ -0.75
CCDC6-201ENST00000263102 RAI1Q7Z5J4 1906 aaPredicted RBP10.38□□□□□ -0.75
CCDC6-201ENST00000263102 C6orf48Q9UBA6 75 aa10.37□□□□□ -0.75
CCDC6-201ENST00000263102 SPINT4Q6UDR6 99 aa10.37□□□□□ -0.75
CCDC6-201ENST00000263102 C2orf91Q6ZV80 131 aa10.36□□□□□ -0.75
CCDC6-201ENST00000263102 KIF25-AS1Q9Y6Z4 181 aa10.36□□□□□ -0.75
CCDC6-201ENST00000263102 C9orf92A6NGG3 77 aa10.35□□□□□ -0.75
CCDC6-201ENST00000263102 SMR3BP02814 79 aaPredicted RBP10.34□□□□□ -0.75
CCDC6-201ENST00000263102 SPG11Q96JI7 2443 aa10.34□□□□□ -0.75
CCDC6-201ENST00000263102 Q8NBF4 154 aa10.34□□□□□ -0.75
CCDC6-201ENST00000263102 EPM2AB3EWF7 344 aa10.33□□□□□ -0.76
CCDC6-201ENST00000263102 SPAG11AQ6PDA7 123 aa10.33□□□□□ -0.76
CCDC6-201ENST00000263102 APLNQ9ULZ1 77 aa10.33□□□□□ -0.76
CCDC6-201ENST00000263102 PCNX3Q9H6A9 2034 aa10.31□□□□□ -0.76
CCDC6-201ENST00000263102 TMEM254Q8TBM7 123 aa10.31□□□□□ -0.76
CCDC6-201ENST00000263102 AMELXQ99217 191 aa10.3□□□□□ -0.76
CCDC6-201ENST00000263102 ACACBO00763 2458 aa10.29□□□□□ -0.76
CCDC6-201ENST00000263102 KIAA1549LQ6ZVL6 1849 aa10.29□□□□□ -0.76
CCDC6-201ENST00000263102 COL5A1P20908 1838 aaPredicted RBP10.29□□□□□ -0.76
CCDC6-201ENST00000263102 MUC4Q99102 2169 aa10.28□□□□□ -0.76
CCDC6-201ENST00000263102 LINC00588Q9Y4M8 146 aa10.28□□□□□ -0.76
CCDC6-201ENST00000263102 PCDH15Q96QU1 1955 aa10.27□□□□□ -0.77
CCDC6-201ENST00000263102 LTBP2Q14767 1821 aa10.27□□□□□ -0.77
CCDC6-201ENST00000263102 CNFNQ9BYD5 112 aa10.25□□□□□ -0.77
CCDC6-201ENST00000263102 LINC01561Q8N1V8 128 aa10.25□□□□□ -0.77
CCDC6-201ENST00000263102 ST20-AS1Q8NBB2 130 aa10.25□□□□□ -0.77
CCDC6-201ENST00000263102 TP53AIP1Q9HCN2 124 aa10.25□□□□□ -0.77
CCDC6-201ENST00000263102 CEP192Q8TEP8 1941 aa10.25□□□□□ -0.77
CCDC6-201ENST00000263102 ATG2AQ2TAZ0 1938 aa10.24□□□□□ -0.77
CCDC6-201ENST00000263102 LINC01554Q52M75 96 aa10.24□□□□□ -0.77
CCDC6-201ENST00000263102 SSBP3-AS1Q7Z2R9 100 aa10.24□□□□□ -0.77
CCDC6-201ENST00000263102 LINC00476Q8WZB0 136 aa10.23□□□□□ -0.77
CCDC6-201ENST00000263102 DOPEY1Q5JWR5 2465 aa10.23□□□□□ -0.77
CCDC6-201ENST00000263102 ARHGAP32A7KAX9 2087 aa10.23□□□□□ -0.77
CCDC6-201ENST00000263102 SPATA3Q8NHX4 192 aa10.23□□□□□ -0.77
CCDC6-201ENST00000263102 CCDC168Q8NDH2 2452 aa10.22□□□□□ -0.77
CCDC6-201ENST00000263102 LINC00846Q9NV44 126 aa10.22□□□□□ -0.77
CCDC6-201ENST00000263102 ABCA2Q9BZC7 2435 aa10.2□□□□□ -0.78
CCDC6-201ENST00000263102 DNAH10OSP0CZ25 163 aa10.2□□□□□ -0.78
CCDC6-201ENST00000263102 ANKHD1Q8IWZ3 2542 aaKnown RBP10.19□□□□□ -0.78
CCDC6-201ENST00000263102 BCE1O60756 84 aa10.19□□□□□ -0.78
CCDC6-201ENST00000263102 IGLV6-57P01721 117 aa10.19□□□□□ -0.78
CCDC6-201ENST00000263102 LINC00304Q8N9R0 145 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms