RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 MXRA5Q9NR99 2828 aa10.54□□□□□ -0.72
XRCC1-201ENST00000262887 FAM236DA0A1B0GTK5 79 aa10.54□□□□□ -0.72
XRCC1-201ENST00000262887 IBA57-AS1B1ANH7 110 aa10.54□□□□□ -0.72
XRCC1-201ENST00000262887 FAM236CP0DP71 79 aa10.54□□□□□ -0.72
XRCC1-201ENST00000262887 TEX15Q9BXT5 2789 aa10.53□□□□□ -0.72
XRCC1-201ENST00000262887 HILS1P60008 231 aa10.53□□□□□ -0.72
XRCC1-201ENST00000262887 SS18Q15532 418 aa10.53□□□□□ -0.72
XRCC1-201ENST00000262887 TMEM86BQ8N661 226 aa10.53□□□□□ -0.72
XRCC1-201ENST00000262887 SERP1Q9Y6X1 66 aa10.53□□□□□ -0.72
XRCC1-201ENST00000262887 STHQ8IWL8 128 aa10.53□□□□□ -0.72
XRCC1-201ENST00000262887 NF1P21359 2839 aa10.53□□□□□ -0.72
XRCC1-201ENST00000262887 GHRHP01286 108 aa10.53□□□□□ -0.72
XRCC1-201ENST00000262887 KHDC1LQ5JSQ8 128 aa10.53□□□□□ -0.72
XRCC1-201ENST00000262887 ACANP16112 2415 aa10.52□□□□□ -0.73
XRCC1-201ENST00000262887 DEFB114Q30KQ6 69 aa10.52□□□□□ -0.73
XRCC1-201ENST00000262887 ATP5EP2Q5VTU8 51 aa10.52□□□□□ -0.73
XRCC1-201ENST00000262887 TRBV6-4A0A1B0GX49 114 aa10.51□□□□□ -0.73
XRCC1-201ENST00000262887 WFDC9Q8NEX5 89 aa10.51□□□□□ -0.73
XRCC1-201ENST00000262887 TRAV23DV6A0A075B6W5 121 aa10.5□□□□□ -0.73
XRCC1-201ENST00000262887 JMJD7-PLA2G4BH0Y9G9 81 aa10.5□□□□□ -0.73
XRCC1-201ENST00000262887 LY6G6DO95868 133 aa10.5□□□□□ -0.73
XRCC1-201ENST00000262887 ODF3L2Q3SX64 289 aa10.5□□□□□ -0.73
XRCC1-201ENST00000262887 NOP10Q9NPE3 64 aaKnown RBP10.5□□□□□ -0.73
XRCC1-201ENST00000262887 IGHV3OR16-9A0A0B4J2B5 98 aa10.49□□□□□ -0.73
XRCC1-201ENST00000262887 LOC100131303A0A0U1RQF7 123 aa10.49□□□□□ -0.73
XRCC1-201ENST00000262887 SEC61GP60059 68 aa10.49□□□□□ -0.73
XRCC1-201ENST00000262887 LINC01356Q8N9X3 169 aa10.49□□□□□ -0.73
XRCC1-201ENST00000262887 C20orf197Q8N268 126 aa10.49□□□□□ -0.73
XRCC1-201ENST00000262887 IGLV4-60A0A075B6I1 120 aa10.48□□□□□ -0.73
XRCC1-201ENST00000262887 ENHOQ6UWT2 76 aa10.48□□□□□ -0.73
XRCC1-201ENST00000262887 FAM19A1Q7Z5A9 133 aa10.48□□□□□ -0.73
XRCC1-201ENST00000262887 C11orf68Q9H3H3 251 aaKnown RBP10.48□□□□□ -0.73
XRCC1-201ENST00000262887 C16orf95Q9H693 158 aa10.48□□□□□ -0.73
XRCC1-201ENST00000262887 XCL1P47992 114 aa10.48□□□□□ -0.73
XRCC1-201ENST00000262887 LINC00167Q96N53 147 aa10.48□□□□□ -0.73
XRCC1-201ENST00000262887 C2CD3Q4AC94 2353 aa10.47□□□□□ -0.73
XRCC1-201ENST00000262887 Q6YL49 198 aa10.47□□□□□ -0.73
XRCC1-201ENST00000262887 C4orf3Q8WVX3 66 aa10.47□□□□□ -0.73
XRCC1-201ENST00000262887 TRGV2A0A075B6R0 118 aa10.47□□□□□ -0.73
XRCC1-201ENST00000262887 A0A087WZ39 114 aa10.47□□□□□ -0.73
XRCC1-201ENST00000262887 MAPK1IP1LQ8NDC0 245 aa10.47□□□□□ -0.73
XRCC1-201ENST00000262887 LYPD5Q6UWN5 251 aa10.46□□□□□ -0.73
XRCC1-201ENST00000262887 TMEM256-PLSCR3K7ERE1 68 aa10.45□□□□□ -0.74
XRCC1-201ENST00000262887 C6orf226Q5I0X4 101 aa10.45□□□□□ -0.74
XRCC1-201ENST00000262887 V9GYY9 64 aa10.45□□□□□ -0.74
XRCC1-201ENST00000262887 Q8N814 137 aa10.45□□□□□ -0.74
XRCC1-201ENST00000262887 WFDC11Q8NEX6 87 aa10.45□□□□□ -0.74
XRCC1-201ENST00000262887 MTORP42345 2549 aa10.44□□□□□ -0.74
XRCC1-201ENST00000262887 SMIM26A0A096LP01 95 aa10.44□□□□□ -0.74
XRCC1-201ENST00000262887 TRBV10-3A0A0K0K1G6 114 aa10.44□□□□□ -0.74
XRCC1-201ENST00000262887 H7BZZ5 65 aa10.44□□□□□ -0.74
XRCC1-201ENST00000262887 UBL5Q9BZL1 73 aa10.44□□□□□ -0.74
XRCC1-201ENST00000262887 FLNBO75369 2602 aaKnown RBP10.43□□□□□ -0.74
XRCC1-201ENST00000262887 TRGV4A0A0C4DH28 118 aa10.43□□□□□ -0.74
XRCC1-201ENST00000262887 DSCR9P59020 149 aa10.43□□□□□ -0.74
XRCC1-201ENST00000262887 FP248Q71RG6 208 aaPredicted RBP10.43□□□□□ -0.74
XRCC1-201ENST00000262887 KMT2BQ9UMN6 2715 aaPredicted RBP10.43□□□□□ -0.74
XRCC1-201ENST00000262887 TRBV6-8A0A0A6YYG3 113 aa10.43□□□□□ -0.74
XRCC1-201ENST00000262887 FLNAP21333 2647 aaKnown RBP10.42□□□□□ -0.74
XRCC1-201ENST00000262887 NIPBLQ6KC79 2804 aaeCLIP10.41□□□□□ -0.74
XRCC1-201ENST00000262887 C1orf195Q5TG92 126 aa10.41□□□□□ -0.74
XRCC1-201ENST00000262887 NANOS2P60321 138 aaKnown RBP10.4□□□□□ -0.74
XRCC1-201ENST00000262887 A0A096LNT2 108 aa10.4□□□□□ -0.74
XRCC1-201ENST00000262887 LINC00959A0A1B0GUT2 108 aa10.4□□□□□ -0.74
XRCC1-201ENST00000262887 ITPR3Q14573 2671 aa10.4□□□□□ -0.75
XRCC1-201ENST00000262887 C16orf74Q96GX8 76 aa10.39□□□□□ -0.75
XRCC1-201ENST00000262887 PLAC8L1A1L4L8 177 aa10.39□□□□□ -0.75
XRCC1-201ENST00000262887 RNASE1P07998 156 aaKnown RBP10.39□□□□□ -0.75
XRCC1-201ENST00000262887 PRR3P79522 188 aaKnown RBP10.39□□□□□ -0.75
XRCC1-201ENST00000262887 BCE1O60756 84 aa10.38□□□□□ -0.75
XRCC1-201ENST00000262887 MYO9AB2RTY4 2548 aa10.37□□□□□ -0.75
XRCC1-201ENST00000262887 UNC79Q9P2D8 2635 aa10.37□□□□□ -0.75
XRCC1-201ENST00000262887 A0A0U1RQV1 116 aa10.37□□□□□ -0.75
XRCC1-201ENST00000262887 BRK1Q8WUW1 75 aa10.37□□□□□ -0.75
XRCC1-201ENST00000262887 TRAV7A0A075B6U4 112 aa10.37□□□□□ -0.75
XRCC1-201ENST00000262887 FSHBP01225 129 aa10.37□□□□□ -0.75
XRCC1-201ENST00000262887 NOTCH3Q9UM47 2321 aa10.37□□□□□ -0.75
XRCC1-201ENST00000262887 KLKP1Q107X0 134 aa10.36□□□□□ -0.75
XRCC1-201ENST00000262887 Q8IZM0 81 aa10.36□□□□□ -0.75
XRCC1-201ENST00000262887 AKAP9Q99996 3911 aa10.36□□□□□ -0.75
XRCC1-201ENST00000262887 ZNF843Q8N446 348 aa10.35□□□□□ -0.75
XRCC1-201ENST00000262887 C11orf44Q8N8P7 122 aa10.35□□□□□ -0.75
XRCC1-201ENST00000262887 GIG44P09565 113 aaPredicted RBP10.35□□□□□ -0.75
XRCC1-201ENST00000262887 PLA2G2AP14555 144 aa10.35□□□□□ -0.75
XRCC1-201ENST00000262887 A0A1W2PRX2 142 aa10.34□□□□□ -0.75
XRCC1-201ENST00000262887 KRTAP10-9P60411 292 aa10.34□□□□□ -0.75
XRCC1-201ENST00000262887 Q6ZQT0 140 aa10.34□□□□□ -0.75
XRCC1-201ENST00000262887 RBM3P98179 157 aaKnown RBP10.34□□□□□ -0.75
XRCC1-201ENST00000262887 LINC00474Q9P2X8 69 aa10.34□□□□□ -0.75
XRCC1-201ENST00000262887 CLPSL2Q6UWE3 100 aa10.33□□□□□ -0.76
XRCC1-201ENST00000262887 C6orf99Q4VX62 202 aa10.33□□□□□ -0.76
XRCC1-201ENST00000262887 WFDC10AQ9H1F0 79 aa10.32□□□□□ -0.76
XRCC1-201ENST00000262887 LINC01547P58512 204 aaPredicted RBP10.32□□□□□ -0.76
XRCC1-201ENST00000262887 TRBV7-6A0A0J9YX20 115 aa10.31□□□□□ -0.76
XRCC1-201ENST00000262887 LINC00482Q8N8I6 264 aa10.31□□□□□ -0.76
XRCC1-201ENST00000262887 LOC110117498A0A087WWA1 95 aa10.31□□□□□ -0.76
XRCC1-201ENST00000262887 SETXQ7Z333 2677 aaKnown RBP10.31□□□□□ -0.76
XRCC1-201ENST00000262887 OTOGQ6ZRI0 2925 aa10.3□□□□□ -0.76
XRCC1-201ENST00000262887 F8WEM9 126 aa10.3□□□□□ -0.76
XRCC1-201ENST00000262887 HAMPP81172 84 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms