RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 MUC7Q8TAX7 377 aa11.37□□□□□ -0.59
SHANK3-201ENST00000262795 IGLV4-60A0A075B6I1 120 aa11.37□□□□□ -0.59
SHANK3-201ENST00000262795 Q8N6K4 173 aa11.37□□□□□ -0.59
SHANK3-201ENST00000262795 SMIM11BQ8TCY0 68 aa11.37□□□□□ -0.59
SHANK3-201ENST00000262795 TRBV7-6A0A0J9YX20 115 aa11.37□□□□□ -0.59
SHANK3-201ENST00000262795 CSDC2Q9Y534 153 aaKnown RBP11.37□□□□□ -0.59
SHANK3-201ENST00000262795 LINC00574Q9H8X3 128 aa11.36□□□□□ -0.59
SHANK3-201ENST00000262795 PCOTHQ58A44 107 aa11.36□□□□□ -0.59
SHANK3-201ENST00000262795 TRBV30A0A0K0K1B3 111 aa11.35□□□□□ -0.59
SHANK3-201ENST00000262795 ATP5EP2Q5VTU8 51 aa11.35□□□□□ -0.59
SHANK3-201ENST00000262795 FHL2Q14192 279 aa11.34□□□□□ -0.59
SHANK3-201ENST00000262795 CRIP3Q6Q6R5 217 aa11.34□□□□□ -0.59
SHANK3-201ENST00000262795 COX6B2Q6YFQ2 88 aa11.34□□□□□ -0.59
SHANK3-201ENST00000262795 FSTL3O95633 263 aa11.33□□□□□ -0.6
SHANK3-201ENST00000262795 SPINT4Q6UDR6 99 aa11.33□□□□□ -0.6
SHANK3-201ENST00000262795 DOPEY1Q5JWR5 2465 aa11.32□□□□□ -0.6
SHANK3-201ENST00000262795 IGKV2D-30A0A075B6S6 120 aa11.32□□□□□ -0.6
SHANK3-201ENST00000262795 IGKV2-30P06310 120 aa11.32□□□□□ -0.6
SHANK3-201ENST00000262795 WWC2-AS2Q96NR7 200 aa11.32□□□□□ -0.6
SHANK3-201ENST00000262795 Q9UF83 564 aa11.32□□□□□ -0.6
SHANK3-201ENST00000262795 TRBV10-3A0A0K0K1G6 114 aa11.32□□□□□ -0.6
SHANK3-201ENST00000262795 C11orf21Q9P2W6 132 aa11.32□□□□□ -0.6
SHANK3-201ENST00000262795 P0C879 139 aa11.31□□□□□ -0.6
SHANK3-201ENST00000262795 LINC00208Q96KT6 92 aa11.31□□□□□ -0.6
SHANK3-201ENST00000262795 A0A087WVE0 104 aa11.31□□□□□ -0.6
SHANK3-201ENST00000262795 CDC42SE2Q9NRR3 84 aa11.31□□□□□ -0.6
SHANK3-201ENST00000262795 LRP4O75096 1905 aa11.29□□□□□ -0.6
SHANK3-201ENST00000262795 PIEZO2Q9H5I5 2752 aa11.29□□□□□ -0.6
SHANK3-201ENST00000262795 LIMD2Q9BT23 127 aa11.29□□□□□ -0.6
SHANK3-201ENST00000262795 PTPRSQ13332 1948 aa11.29□□□□□ -0.6
SHANK3-201ENST00000262795 LINC00310P59036 64 aa11.28□□□□□ -0.6
SHANK3-201ENST00000262795 RTL8CO15255 209 aa11.28□□□□□ -0.6
SHANK3-201ENST00000262795 LINC00242Q5T6M2 205 aa11.28□□□□□ -0.6
SHANK3-201ENST00000262795 KLLNB2CW77 178 aa11.27□□□□□ -0.6
SHANK3-201ENST00000262795 Q8IZM0 81 aa11.27□□□□□ -0.61
SHANK3-201ENST00000262795 COX17Q14061 63 aa11.27□□□□□ -0.61
SHANK3-201ENST00000262795 ANKHD1Q8IWZ3 2542 aaKnown RBP11.26□□□□□ -0.61
SHANK3-201ENST00000262795 MOBPQ13875 183 aa11.26□□□□□ -0.61
SHANK3-201ENST00000262795 TYMSOSQ8TAI1 123 aa11.25□□□□□ -0.61
SHANK3-201ENST00000262795 EIF4EBP1Q13541 118 aaPredicted RBP11.25□□□□□ -0.61
SHANK3-201ENST00000262795 NRACQ8N912 160 aa11.25□□□□□ -0.61
SHANK3-201ENST00000262795 A8MTW9 85 aa11.25□□□□□ -0.61
SHANK3-201ENST00000262795 Q6ZRU5 148 aa11.25□□□□□ -0.61
SHANK3-201ENST00000262795 SMR3BP02814 79 aaPredicted RBP11.25□□□□□ -0.61
SHANK3-201ENST00000262795 C4orf26Q17RF5 130 aa11.24□□□□□ -0.61
SHANK3-201ENST00000262795 EGFEM1PQ0D2K5 195 aa11.24□□□□□ -0.61
SHANK3-201ENST00000262795 SPAG11AQ6PDA7 123 aa11.23□□□□□ -0.61
SHANK3-201ENST00000262795 CACNA1AO00555 2505 aa11.23□□□□□ -0.61
SHANK3-201ENST00000262795 Q6ZSN1 163 aa11.23□□□□□ -0.61
SHANK3-201ENST00000262795 LINC01547P58512 204 aaPredicted RBP11.23□□□□□ -0.61
SHANK3-201ENST00000262795 NCOR2Q9Y618 2525 aa11.22□□□□□ -0.61
SHANK3-201ENST00000262795 LINC00315P59091 139 aa11.22□□□□□ -0.61
SHANK3-201ENST00000262795 IMUPQ9GZP8 106 aa11.22□□□□□ -0.61
SHANK3-201ENST00000262795 URB1-AS1Q96HZ7 61 aa11.22□□□□□ -0.61
SHANK3-201ENST00000262795 RPL37AP61513 92 aaKnown RBP11.22□□□□□ -0.61
SHANK3-201ENST00000262795 CPAMD8Q8IZJ3 1885 aa11.21□□□□□ -0.61
SHANK3-201ENST00000262795 A0A087WSZ3 146 aa11.21□□□□□ -0.61
SHANK3-201ENST00000262795 TRBV7-7A0A0K0K1E9 115 aa11.21□□□□□ -0.61
SHANK3-201ENST00000262795 C7orf65Q6ZTY9 151 aa11.21□□□□□ -0.62
SHANK3-201ENST00000262795 IGF2RP11717 2491 aa11.21□□□□□ -0.62
SHANK3-201ENST00000262795 TRAV7A0A075B6U4 112 aa11.2□□□□□ -0.62
SHANK3-201ENST00000262795 PHF5AQ7RTV0 110 aaKnown RBP11.2□□□□□ -0.62
SHANK3-201ENST00000262795 LRRK2Q5S007 2527 aa11.2□□□□□ -0.62
SHANK3-201ENST00000262795 MRPS36P82909 103 aaKnown RBP11.2□□□□□ -0.62
SHANK3-201ENST00000262795 C22orf24Q9Y442 160 aa11.2□□□□□ -0.62
SHANK3-201ENST00000262795 SMCR5Q8TEV8 140 aa11.19□□□□□ -0.62
SHANK3-201ENST00000262795 NAV2Q8IVL1 2488 aa11.16□□□□□ -0.62
SHANK3-201ENST00000262795 A0A087WYN8 130 aa11.16□□□□□ -0.62
SHANK3-201ENST00000262795 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.16□□□□□ -0.62
SHANK3-201ENST00000262795 Q6JHZ5 121 aa11.16□□□□□ -0.62
SHANK3-201ENST00000262795 MYO18BQ8IUG5 2567 aa11.14□□□□□ -0.63
SHANK3-201ENST00000262795 TSPEAR-AS2P59090 65 aa11.14□□□□□ -0.63
SHANK3-201ENST00000262795 HCG22E2RYF7 251 aa11.14□□□□□ -0.63
SHANK3-201ENST00000262795 ZNF580Q9UK33 172 aa11.14□□□□□ -0.63
SHANK3-201ENST00000262795 IGLV8-61A0A075B6I0 122 aa11.13□□□□□ -0.63
SHANK3-201ENST00000262795 H0Y9P7 68 aa11.13□□□□□ -0.63
SHANK3-201ENST00000262795 CHCHD7Q9BUK0 85 aa11.13□□□□□ -0.63
SHANK3-201ENST00000262795 NBDYA0A0U1RRE5 68 aa11.12□□□□□ -0.63
SHANK3-201ENST00000262795 EP400Q96L91 3159 aa11.12□□□□□ -0.63
SHANK3-201ENST00000262795 PRO0628Q9UI54 55 aa11.11□□□□□ -0.63
SHANK3-201ENST00000262795 Q8N3U1 123 aa11.09□□□□□ -0.63
SHANK3-201ENST00000262795 MUC22E2RYF6 1773 aaPredicted RBP11.09□□□□□ -0.63
SHANK3-201ENST00000262795 LINC00575Q6W349 94 aa11.09□□□□□ -0.63
SHANK3-201ENST00000262795 hDV103S1A0JD37 113 aa11.08□□□□□ -0.64
SHANK3-201ENST00000262795 Q8N814 137 aa11.08□□□□□ -0.64
SHANK3-201ENST00000262795 Q96NJ1 140 aa11.08□□□□□ -0.64
SHANK3-201ENST00000262795 ZFYVE26Q68DK2 2539 aa11.07□□□□□ -0.64
SHANK3-201ENST00000262795 CDIP1Q9H305 208 aa11.07□□□□□ -0.64
SHANK3-201ENST00000262795 SMIM1B2RUZ4 78 aa11.07□□□□□ -0.64
SHANK3-201ENST00000262795 POLR2KP53803 58 aaKnown RBP11.07□□□□□ -0.64
SHANK3-201ENST00000262795 ADAMTSL4-AS1Q5T5F5 129 aa11.07□□□□□ -0.64
SHANK3-201ENST00000262795 ATP11AUNQ6ZP68 121 aa11.07□□□□□ -0.64
SHANK3-201ENST00000262795 JMJD1CQ15652 2540 aa11.06□□□□□ -0.64
SHANK3-201ENST00000262795 C9orf92A6NGG3 77 aa11.06□□□□□ -0.64
SHANK3-201ENST00000262795 NTM-AS1Q6ZSK4 140 aa11.05□□□□□ -0.64
SHANK3-201ENST00000262795 Q6ZRP5 223 aa11.04□□□□□ -0.64
SHANK3-201ENST00000262795 A0A1B0GU69 56 aa11.04□□□□□ -0.64
SHANK3-201ENST00000262795 SSBP3-AS1Q7Z2R9 100 aa11.02□□□□□ -0.64
SHANK3-201ENST00000262795 LINC00588Q9Y4M8 146 aa11.02□□□□□ -0.64
SHANK3-201ENST00000262795 COL27A1Q8IZC6 1860 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms