RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 TRAV13-2A0A0B4J235 113 aa10.18□□□□□ -0.78
SFSWAP-201ENST00000261674 SLPIP03973 132 aa10.18□□□□□ -0.78
SFSWAP-201ENST00000261674 NBEAL1Q6ZS30 2694 aa10.18□□□□□ -0.78
SFSWAP-201ENST00000261674 Q6Q795 121 aa10.18□□□□□ -0.78
SFSWAP-201ENST00000261674 SMCR5Q8TEV8 140 aa10.18□□□□□ -0.78
SFSWAP-201ENST00000261674 SMIM11BQ8TCY0 68 aa10.17□□□□□ -0.78
SFSWAP-201ENST00000261674 CCL18P55774 89 aa10.17□□□□□ -0.78
SFSWAP-201ENST00000261674 KRTAP24-1Q3LI83 254 aa10.17□□□□□ -0.78
SFSWAP-201ENST00000261674 C16orf74Q96GX8 76 aa10.17□□□□□ -0.78
SFSWAP-201ENST00000261674 A0A087WYN8 130 aa10.16□□□□□ -0.78
SFSWAP-201ENST00000261674 SMIM20Q8N5G0 67 aa10.16□□□□□ -0.78
SFSWAP-201ENST00000261674 LINC01600Q96MT4 127 aa10.16□□□□□ -0.78
SFSWAP-201ENST00000261674 FAM240AA0A1B0GVK7 77 aa10.16□□□□□ -0.78
SFSWAP-201ENST00000261674 C14orf132Q9NPU4 83 aa10.16□□□□□ -0.78
SFSWAP-201ENST00000261674 IGKV2-28A0A075B6P5 120 aa10.16□□□□□ -0.78
SFSWAP-201ENST00000261674 TRBV6-8A0A0A6YYG3 113 aa10.16□□□□□ -0.78
SFSWAP-201ENST00000261674 IGKV2D-28P01615 120 aa10.16□□□□□ -0.78
SFSWAP-201ENST00000261674 TRACP01848 142 aa10.16□□□□□ -0.78
SFSWAP-201ENST00000261674 IL17DQ8TAD2 202 aa10.16□□□□□ -0.78
SFSWAP-201ENST00000261674 LECT2O14960 151 aa10.15□□□□□ -0.78
SFSWAP-201ENST00000261674 MALP21145 153 aa10.15□□□□□ -0.78
SFSWAP-201ENST00000261674 PLAC8L1A1L4L8 177 aa10.14□□□□□ -0.79
SFSWAP-201ENST00000261674 DEFB121Q5J5C9 76 aa10.14□□□□□ -0.79
SFSWAP-201ENST00000261674 C9orf129Q5T035 196 aaKnown RBP10.14□□□□□ -0.79
SFSWAP-201ENST00000261674 DEFB4AO15263 64 aa10.14□□□□□ -0.79
SFSWAP-201ENST00000261674 PRR3P79522 188 aaKnown RBP10.14□□□□□ -0.79
SFSWAP-201ENST00000261674 TRBV6-4A0A1B0GX49 114 aa10.13□□□□□ -0.79
SFSWAP-201ENST00000261674 GYPEP15421 78 aa10.13□□□□□ -0.79
SFSWAP-201ENST00000261674 IGLV10-54A0A075B6I4 117 aa10.13□□□□□ -0.79
SFSWAP-201ENST00000261674 FHL2Q14192 279 aa10.13□□□□□ -0.79
SFSWAP-201ENST00000261674 IGHV3OR16-9A0A0B4J2B5 98 aa10.12□□□□□ -0.79
SFSWAP-201ENST00000261674 ACYP1P07311 99 aa10.12□□□□□ -0.79
SFSWAP-201ENST00000261674 MRPL23Q16540 153 aaKnown RBP10.12□□□□□ -0.79
SFSWAP-201ENST00000261674 IGKV3D-7A0A0C4DH55 119 aa10.12□□□□□ -0.79
SFSWAP-201ENST00000261674 NCR3O14931 201 aa10.11□□□□□ -0.79
SFSWAP-201ENST00000261674 RPL28P46779 137 aaKnown RBP10.11□□□□□ -0.79
SFSWAP-201ENST00000261674 LINC00643Q86TS7 51 aa10.11□□□□□ -0.79
SFSWAP-201ENST00000261674 C16orf95Q9H693 158 aa10.11□□□□□ -0.79
SFSWAP-201ENST00000261674 INAFM2P0DMQ5 153 aa10.11□□□□□ -0.79
SFSWAP-201ENST00000261674 SDIM1Q6ZPB5 146 aa10.11□□□□□ -0.79
SFSWAP-201ENST00000261674 FAM19A3Q7Z5A8 133 aa10.1□□□□□ -0.79
SFSWAP-201ENST00000261674 C22orf24Q9Y442 160 aa10.1□□□□□ -0.79
SFSWAP-201ENST00000261674 LINC00959A0A1B0GUT2 108 aa10.1□□□□□ -0.79
SFSWAP-201ENST00000261674 TRBV7-7A0A0K0K1E9 115 aa10.09□□□□□ -0.79
SFSWAP-201ENST00000261674 PRB2P02812 416 aaPredicted RBP10.09□□□□□ -0.79
SFSWAP-201ENST00000261674 IGLV1-51P01701 117 aa10.08□□□□□ -0.8
SFSWAP-201ENST00000261674 OXLD1Q5BKU9 147 aa10.08□□□□□ -0.8
SFSWAP-201ENST00000261674 A0A087WZ39 114 aa10.07□□□□□ -0.8
SFSWAP-201ENST00000261674 C9orf153Q5TBE3 101 aa10.07□□□□□ -0.8
SFSWAP-201ENST00000261674 SS18Q15532 418 aa10.07□□□□□ -0.8
SFSWAP-201ENST00000261674 C19orf73Q9NVV2 129 aa10.07□□□□□ -0.8
SFSWAP-201ENST00000261674 IBA57-AS1B1ANH7 110 aa10.07□□□□□ -0.8
SFSWAP-201ENST00000261674 Q8N3U1 123 aa10.07□□□□□ -0.8
SFSWAP-201ENST00000261674 CSNK1G2-AS1Q8NCQ2 148 aa10.07□□□□□ -0.8
SFSWAP-201ENST00000261674 C9orf116Q5BN46 136 aaPredicted RBP10.06□□□□□ -0.8
SFSWAP-201ENST00000261674 LINC00482Q8N8I6 264 aa10.06□□□□□ -0.8
SFSWAP-201ENST00000261674 CMC4P56277 68 aaPredicted RBP10.06□□□□□ -0.8
SFSWAP-201ENST00000261674 HTN3P15516 51 aa10.05□□□□□ -0.8
SFSWAP-201ENST00000261674 FAM222AQ5U5X8 452 aa10.05□□□□□ -0.8
SFSWAP-201ENST00000261674 LINC00269Q8N2A0 174 aa10.05□□□□□ -0.8
SFSWAP-201ENST00000261674 OVOL2Q9BRP0 275 aa10.05□□□□□ -0.8
SFSWAP-201ENST00000261674 H0YGX0 51 aa10.05□□□□□ -0.8
SFSWAP-201ENST00000261674 LINC00526Q96FQ7 95 aa10.05□□□□□ -0.8
SFSWAP-201ENST00000261674 ANGP03950 147 aaKnown RBP10.04□□□□□ -0.8
SFSWAP-201ENST00000261674 A0A087WVE0 104 aa10.03□□□□□ -0.8
SFSWAP-201ENST00000261674 LINC00846Q9NV44 126 aa10.03□□□□□ -0.8
SFSWAP-201ENST00000261674 CFAP161Q6P656 301 aa10.02□□□□□ -0.81
SFSWAP-201ENST00000261674 KLK5Q9Y337 293 aaPredicted RBP10.02□□□□□ -0.81
SFSWAP-201ENST00000261674 HIST1H4AP62805 103 aaKnown RBP10.02□□□□□ -0.81
SFSWAP-201ENST00000261674 IMUPQ9GZP8 106 aa10.02□□□□□ -0.81
SFSWAP-201ENST00000261674 MDFIQ99750 246 aa10.01□□□□□ -0.81
SFSWAP-201ENST00000261674 DEFB135Q30KP9 77 aa10.01□□□□□ -0.81
SFSWAP-201ENST00000261674 ORMDL1Q9P0S3 153 aa10□□□□□ -0.81
SFSWAP-201ENST00000261674 CXCL5P42830 114 aa9.99□□□□□ -0.81
SFSWAP-201ENST00000261674 PRO0255Q9UI72 69 aa9.99□□□□□ -0.81
SFSWAP-201ENST00000261674 C3orf22Q8N5N4 141 aa9.98□□□□□ -0.81
SFSWAP-201ENST00000261674 WFDC9Q8NEX5 89 aa9.98□□□□□ -0.81
SFSWAP-201ENST00000261674 CHCHD10Q8WYQ3 142 aaPredicted RBP9.97□□□□□ -0.81
SFSWAP-201ENST00000261674 A0A1B0GX51 115 aa9.97□□□□□ -0.81
SFSWAP-201ENST00000261674 S100A7L2Q5SY68 101 aa9.97□□□□□ -0.81
SFSWAP-201ENST00000261674 C6orf99Q4VX62 202 aa9.95□□□□□ -0.82
SFSWAP-201ENST00000261674 hADV29S1A0JD25 119 aa9.95□□□□□ -0.82
SFSWAP-201ENST00000261674 UQCRQO14949 82 aa9.95□□□□□ -0.82
SFSWAP-201ENST00000261674 C6orf223Q8N319 242 aa9.95□□□□□ -0.82
SFSWAP-201ENST00000261674 Q8IZM0 81 aa9.95□□□□□ -0.82
SFSWAP-201ENST00000261674 REG3AQ06141 175 aa9.94□□□□□ -0.82
SFSWAP-201ENST00000261674 KIR2DL5BQ8NHK3 375 aa9.94□□□□□ -0.82
SFSWAP-201ENST00000261674 X6R8D5 127 aa9.94□□□□□ -0.82
SFSWAP-201ENST00000261674 DAD1P61803 113 aa9.93□□□□□ -0.82
SFSWAP-201ENST00000261674 UNQ6190/PRO20217Q6UXQ8 127 aa9.92□□□□□ -0.82
SFSWAP-201ENST00000261674 FAM110AQ9BQ89 295 aa9.92□□□□□ -0.82
SFSWAP-201ENST00000261674 TMEM126AQ9H061 195 aa9.92□□□□□ -0.82
SFSWAP-201ENST00000261674 A0A1B0GUV1 79 aa9.92□□□□□ -0.82
SFSWAP-201ENST00000261674 Q8N814 137 aa9.92□□□□□ -0.82
SFSWAP-201ENST00000261674 ANK2Q01484 3957 aa9.91□□□□□ -0.82
SFSWAP-201ENST00000261674 COX7CP15954 63 aa9.91□□□□□ -0.82
SFSWAP-201ENST00000261674 C10orf25Q5T742 122 aa9.91□□□□□ -0.82
SFSWAP-201ENST00000261674 CD164L2Q6UWJ8 174 aa9.91□□□□□ -0.82
SFSWAP-201ENST00000261674 LAMTOR3Q9UHA4 124 aa9.91□□□□□ -0.82
SFSWAP-201ENST00000261674 KLK12Q9UKR0 248 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms