RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 DAD1P61803 113 aa11.41□□□□□ -0.58
UBQLN1-201ENST00000257468 SS18Q15532 418 aa11.4□□□□□ -0.58
UBQLN1-201ENST00000257468 C6orf226Q5I0X4 101 aa11.4□□□□□ -0.58
UBQLN1-201ENST00000257468 LINC00269Q8N2A0 174 aa11.4□□□□□ -0.58
UBQLN1-201ENST00000257468 TRAV26-1A0A087WT03 109 aa11.4□□□□□ -0.58
UBQLN1-201ENST00000257468 CRPP02741 224 aa11.4□□□□□ -0.58
UBQLN1-201ENST00000257468 Q8NAQ8 132 aa11.4□□□□□ -0.58
UBQLN1-201ENST00000257468 IGLV10-54A0A075B6I4 117 aa11.39□□□□□ -0.59
UBQLN1-201ENST00000257468 IBA57-AS1B1ANH7 110 aa11.39□□□□□ -0.59
UBQLN1-201ENST00000257468 HTN3P15516 51 aa11.39□□□□□ -0.59
UBQLN1-201ENST00000257468 TRAV8-4A0A0B4J246 113 aa11.38□□□□□ -0.59
UBQLN1-201ENST00000257468 PPDPFQ9H3Y8 114 aa11.38□□□□□ -0.59
UBQLN1-201ENST00000257468 TRAV13-2A0A0B4J235 113 aa11.37□□□□□ -0.59
UBQLN1-201ENST00000257468 ANGP03950 147 aaKnown RBP11.36□□□□□ -0.59
UBQLN1-201ENST00000257468 IGHV4-30-4P0DP06 118 aa11.36□□□□□ -0.59
UBQLN1-201ENST00000257468 ATP5G1P05496 136 aa11.35□□□□□ -0.59
UBQLN1-201ENST00000257468 SMIM11BQ8TCY0 68 aa11.35□□□□□ -0.59
UBQLN1-201ENST00000257468 RPL28P46779 137 aaKnown RBP11.34□□□□□ -0.59
UBQLN1-201ENST00000257468 CHCHD10Q8WYQ3 142 aaPredicted RBP11.34□□□□□ -0.59
UBQLN1-201ENST00000257468 Q9HAA7 133 aa11.34□□□□□ -0.59
UBQLN1-201ENST00000257468 REG3AQ06141 175 aa11.34□□□□□ -0.59
UBQLN1-201ENST00000257468 Q8IZM0 81 aa11.34□□□□□ -0.59
UBQLN1-201ENST00000257468 MIFP14174 115 aa11.33□□□□□ -0.6
UBQLN1-201ENST00000257468 TRACP01848 142 aa11.33□□□□□ -0.6
UBQLN1-201ENST00000257468 A0A1B0GV72 72 aa11.32□□□□□ -0.6
UBQLN1-201ENST00000257468 C22orf24Q9Y442 160 aa11.32□□□□□ -0.6
UBQLN1-201ENST00000257468 CD164L2Q6UWJ8 174 aa11.32□□□□□ -0.6
UBQLN1-201ENST00000257468 A0A087WYN8 130 aa11.31□□□□□ -0.6
UBQLN1-201ENST00000257468 BAALC-AS2P0C853 105 aa11.31□□□□□ -0.6
UBQLN1-201ENST00000257468 SPART-AS1P0CW21 52 aa11.31□□□□□ -0.6
UBQLN1-201ENST00000257468 CKS1BP61024 79 aa11.31□□□□□ -0.6
UBQLN1-201ENST00000257468 KIAA0087Q14695 138 aa11.31□□□□□ -0.6
UBQLN1-201ENST00000257468 DEFB121Q5J5C9 76 aa11.31□□□□□ -0.6
UBQLN1-201ENST00000257468 WFDC9Q8NEX5 89 aa11.31□□□□□ -0.6
UBQLN1-201ENST00000257468 OR13C6PQ8NH95 151 aa11.31□□□□□ -0.6
UBQLN1-201ENST00000257468 PRR3P79522 188 aaKnown RBP11.3□□□□□ -0.6
UBQLN1-201ENST00000257468 C9orf116Q5BN46 136 aaPredicted RBP11.3□□□□□ -0.6
UBQLN1-201ENST00000257468 TTC32Q5I0X7 151 aa11.29□□□□□ -0.6
UBQLN1-201ENST00000257468 C15orf53Q8NAA6 179 aa11.29□□□□□ -0.6
UBQLN1-201ENST00000257468 SNCGO76070 127 aa11.29□□□□□ -0.6
UBQLN1-201ENST00000257468 OXLD1Q5BKU9 147 aa11.29□□□□□ -0.6
UBQLN1-201ENST00000257468 MALP21145 153 aa11.28□□□□□ -0.6
UBQLN1-201ENST00000257468 RETNQ9HD89 108 aa11.28□□□□□ -0.6
UBQLN1-201ENST00000257468 MRPL23Q16540 153 aaKnown RBP11.28□□□□□ -0.6
UBQLN1-201ENST00000257468 CFAP161Q6P656 301 aa11.27□□□□□ -0.61
UBQLN1-201ENST00000257468 LINC00526Q96FQ7 95 aa11.27□□□□□ -0.61
UBQLN1-201ENST00000257468 LINC01561Q8N1V8 128 aa11.26□□□□□ -0.61
UBQLN1-201ENST00000257468 WIPF1O43516 503 aa11.25□□□□□ -0.61
UBQLN1-201ENST00000257468 C6orf223Q8N319 242 aa11.25□□□□□ -0.61
UBQLN1-201ENST00000257468 LELP1Q5T871 98 aa11.25□□□□□ -0.61
UBQLN1-201ENST00000257468 KLK12Q9UKR0 248 aa11.25□□□□□ -0.61
UBQLN1-201ENST00000257468 ANK2Q01484 3957 aa11.24□□□□□ -0.61
UBQLN1-201ENST00000257468 FAM240AA0A1B0GVK7 77 aa11.24□□□□□ -0.61
UBQLN1-201ENST00000257468 KRTAP10-11P60412 298 aa11.24□□□□□ -0.61
UBQLN1-201ENST00000257468 LECT2O14960 151 aa11.23□□□□□ -0.61
UBQLN1-201ENST00000257468 C9orf129Q5T035 196 aaKnown RBP11.23□□□□□ -0.61
UBQLN1-201ENST00000257468 C10orf25Q5T742 122 aa11.23□□□□□ -0.61
UBQLN1-201ENST00000257468 Q8NDZ9 215 aa11.23□□□□□ -0.61
UBQLN1-201ENST00000257468 GAGE2BQ13066 116 aa11.23□□□□□ -0.61
UBQLN1-201ENST00000257468 GAGE2EQ4V326 116 aa11.23□□□□□ -0.61
UBQLN1-201ENST00000257468 GAGE2DQ9UEU5 116 aa11.23□□□□□ -0.61
UBQLN1-201ENST00000257468 DNAL4O96015 105 aa11.22□□□□□ -0.61
UBQLN1-201ENST00000257468 SLPIP03973 132 aa11.21□□□□□ -0.61
UBQLN1-201ENST00000257468 F8P00451 2351 aa11.21□□□□□ -0.61
UBQLN1-201ENST00000257468 NANOS2P60321 138 aaKnown RBP11.21□□□□□ -0.62
UBQLN1-201ENST00000257468 UNQ6190/PRO20217Q6UXQ8 127 aa11.21□□□□□ -0.62
UBQLN1-201ENST00000257468 PKD1L1Q8TDX9 2849 aa11.21□□□□□ -0.62
UBQLN1-201ENST00000257468 H0YGX0 51 aa11.2□□□□□ -0.62
UBQLN1-201ENST00000257468 CXCL5P42830 114 aa11.2□□□□□ -0.62
UBQLN1-201ENST00000257468 LYPD5Q6UWN5 251 aa11.2□□□□□ -0.62
UBQLN1-201ENST00000257468 ENHOQ6UWT2 76 aa11.2□□□□□ -0.62
UBQLN1-201ENST00000257468 SPAG11BQ08648 103 aa11.2□□□□□ -0.62
UBQLN1-201ENST00000257468 NCR3O14931 201 aa11.19□□□□□ -0.62
UBQLN1-201ENST00000257468 SMCR5Q8TEV8 140 aa11.19□□□□□ -0.62
UBQLN1-201ENST00000257468 FBN1P35555 2871 aaKnown RBP11.19□□□□□ -0.62
UBQLN1-201ENST00000257468 COX17Q14061 63 aa11.19□□□□□ -0.62
UBQLN1-201ENST00000257468 PRR34Q9NV39 138 aa11.19□□□□□ -0.62
UBQLN1-201ENST00000257468 ANAPC13Q9BS18 74 aa11.18□□□□□ -0.62
UBQLN1-201ENST00000257468 CYSRT1A8MQ03 144 aa11.16□□□□□ -0.62
UBQLN1-201ENST00000257468 Q6ZTC4 211 aa11.16□□□□□ -0.62
UBQLN1-201ENST00000257468 WFDC10BQ8IUB3 73 aa11.16□□□□□ -0.62
UBQLN1-201ENST00000257468 KLK5Q9Y337 293 aaPredicted RBP11.16□□□□□ -0.62
UBQLN1-201ENST00000257468 GAGE2AQ6NT46 116 aa11.16□□□□□ -0.62
UBQLN1-201ENST00000257468 Q6Q795 121 aa11.16□□□□□ -0.62
UBQLN1-201ENST00000257468 TENM3Q9P273 2699 aa11.16□□□□□ -0.62
UBQLN1-201ENST00000257468 CMYA5Q8N3K9 4069 aa11.15□□□□□ -0.62
UBQLN1-201ENST00000257468 KRTAP24-1Q3LI83 254 aa11.15□□□□□ -0.62
UBQLN1-201ENST00000257468 NDUFC2O95298 119 aa11.15□□□□□ -0.62
UBQLN1-201ENST00000257468 ACYP1P07311 99 aa11.15□□□□□ -0.62
UBQLN1-201ENST00000257468 NHLRC4P0CG21 123 aaPredicted RBP11.15□□□□□ -0.62
UBQLN1-201ENST00000257468 NDUFV3P56181 108 aaKnown RBP11.15□□□□□ -0.62
UBQLN1-201ENST00000257468 KPRPQ5T749 579 aaPredicted RBP11.15□□□□□ -0.62
UBQLN1-201ENST00000257468 C14orf132Q9NPU4 83 aa11.15□□□□□ -0.62
UBQLN1-201ENST00000257468 STAB1Q9NY15 2570 aa11.14□□□□□ -0.63
UBQLN1-201ENST00000257468 INAFM2P0DMQ5 153 aa11.13□□□□□ -0.63
UBQLN1-201ENST00000257468 TMEM126AQ9H061 195 aa11.12□□□□□ -0.63
UBQLN1-201ENST00000257468 FLNBO75369 2602 aaKnown RBP11.11□□□□□ -0.63
UBQLN1-201ENST00000257468 C6orf99Q4VX62 202 aa11.1□□□□□ -0.63
UBQLN1-201ENST00000257468 ORMDL1Q9P0S3 153 aa11.1□□□□□ -0.63
UBQLN1-201ENST00000257468 C6orf48Q9UBA6 75 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms