RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ABCA1O95477 2261 aa4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 A6NDX4 124 aa4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 GPR179Q6PRD1 2367 aa4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 Q6ZTC4 211 aa4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 LINC01006Q8NI28 216 aa4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 WNK2Q9Y3S1 2297 aa4.72□□□□□ -1.65
PDGFRA-201ENST00000257290 Q9BRP9 147 aa4.71□□□□□ -1.65
PDGFRA-201ENST00000257290 CAMK2N2Q96S95 79 aa4.71□□□□□ -1.66
PDGFRA-201ENST00000257290 FAM186AA6NE01 2351 aa4.71□□□□□ -1.66
PDGFRA-201ENST00000257290 SSBP3-AS1Q7Z2R9 100 aa4.71□□□□□ -1.66
PDGFRA-201ENST00000257290 SEC61BP60468 96 aaKnown RBP4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 ACYP2P14621 99 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 Q8N9P0 234 aaPredicted RBP4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 DHRS4-AS1Q9P1J3 65 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 A6NN06 94 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 C1orf137Q5JT78 98 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 C1orf229Q6ZS94 237 aaPredicted RBP4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 LINC00476Q8WZB0 136 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 EML5Q05BV3 1969 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 CPAMD8Q8IZJ3 1885 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 IGLV5-39A0A0G2JS06 123 aa4.7□□□□□ -1.66
PDGFRA-201ENST00000257290 PTPRBP23467 1997 aa4.69□□□□□ -1.66
PDGFRA-201ENST00000257290 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
PDGFRA-201ENST00000257290 IGHV4-30-4P0DP06 118 aa4.69□□□□□ -1.66
PDGFRA-201ENST00000257290 IGHV4-31P0DP07 118 aa4.69□□□□□ -1.66
PDGFRA-201ENST00000257290 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 C4orf3Q8WVX3 66 aa4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 CDC42SE2Q9NRR3 84 aa4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 CSAG1Q6PB30 78 aa4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 OBSCN-AS1Q96MR7 158 aa4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 ZNF407Q9C0G0 2248 aa4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 Q8IZM0 81 aa4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 PRR3P79522 188 aaKnown RBP4.68□□□□□ -1.66
PDGFRA-201ENST00000257290 Q6YL49 198 aa4.67□□□□□ -1.66
PDGFRA-201ENST00000257290 COX6A2Q02221 97 aa4.67□□□□□ -1.66
PDGFRA-201ENST00000257290 PRRC2AP48634 2157 aaKnown RBP4.67□□□□□ -1.66
PDGFRA-201ENST00000257290 KLK12Q9UKR0 248 aa4.67□□□□□ -1.66
PDGFRA-201ENST00000257290 IGLV10-54A0A075B6I4 117 aa4.67□□□□□ -1.66
PDGFRA-201ENST00000257290 TP53AIP1Q9HCN2 124 aa4.67□□□□□ -1.66
PDGFRA-201ENST00000257290 DEFB116Q30KQ4 102 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 OCR1Q9BZK8 76 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 K7EQG2 157 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 DEFB130BP0DP73 79 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 DEFB130AP0DP74 79 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 PRR9Q5T870 116 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 EP300Q09472 2414 aaPredicted RBP4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 X6R8D5 127 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 CHCHD7Q9BUK0 85 aa4.66□□□□□ -1.66
PDGFRA-201ENST00000257290 PCNX2A6NKB5 2137 aa4.65□□□□□ -1.66
PDGFRA-201ENST00000257290 KPRPQ5T749 579 aaPredicted RBP4.65□□□□□ -1.66
PDGFRA-201ENST00000257290 LINC01558Q9Y6Z2 57 aa4.65□□□□□ -1.66
PDGFRA-201ENST00000257290 SLURP1P55000 103 aa4.65□□□□□ -1.67
PDGFRA-201ENST00000257290 DEFB1P60022 68 aa4.65□□□□□ -1.67
PDGFRA-201ENST00000257290 IGLV5-45A0A087WSX0 123 aa4.64□□□□□ -1.67
PDGFRA-201ENST00000257290 MED13LQ71F56 2210 aa4.64□□□□□ -1.67
PDGFRA-201ENST00000257290 C6orf48Q9UBA6 75 aa4.64□□□□□ -1.67
PDGFRA-201ENST00000257290 DMAC1Q96GE9 116 aa4.64□□□□□ -1.67
PDGFRA-201ENST00000257290 NOP10Q9NPE3 64 aaKnown RBP4.63□□□□□ -1.67
PDGFRA-201ENST00000257290 ICE1Q9Y2F5 2266 aa4.63□□□□□ -1.67
PDGFRA-201ENST00000257290 TET2Q6N021 2002 aaPredicted RBP4.63□□□□□ -1.67
PDGFRA-201ENST00000257290 DEFB136Q30KP8 78 aa4.63□□□□□ -1.67
PDGFRA-201ENST00000257290 IGLV4-60A0A075B6I1 120 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 KLLNB2CW77 178 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 INAFM1C9JVW0 142 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 PLA2G1BP04054 148 aaKnown RBP4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 DSCAMO60469 2012 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 CACNA1BQ00975 2339 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 IGKV2-28A0A075B6P5 120 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 IGKV2D-28P01615 120 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 PROK1P58294 105 aa4.62□□□□□ -1.67
PDGFRA-201ENST00000257290 C9orf129Q5T035 196 aaKnown RBP4.61□□□□□ -1.67
PDGFRA-201ENST00000257290 CHCHD10Q8WYQ3 142 aaPredicted RBP4.61□□□□□ -1.67
PDGFRA-201ENST00000257290 C16orf74Q96GX8 76 aa4.61□□□□□ -1.67
PDGFRA-201ENST00000257290 LINC00959A0A1B0GUT2 108 aa4.6□□□□□ -1.67
PDGFRA-201ENST00000257290 IGLV9-49A0A0B4J1Y8 123 aa4.6□□□□□ -1.67
PDGFRA-201ENST00000257290 PKDREJQ9NTG1 2253 aa4.6□□□□□ -1.67
PDGFRA-201ENST00000257290 A0A096LPF7 62 aa4.59□□□□□ -1.67
PDGFRA-201ENST00000257290 PCSK5Q92824 1860 aa4.59□□□□□ -1.67
PDGFRA-201ENST00000257290 LY6G6DO95868 133 aa4.59□□□□□ -1.67
PDGFRA-201ENST00000257290 IGLV1-40P01703 118 aa4.59□□□□□ -1.68
PDGFRA-201ENST00000257290 CHTF8P0CG12 524 aa4.58□□□□□ -1.68
PDGFRA-201ENST00000257290 Q8NAQ8 132 aa4.58□□□□□ -1.68
PDGFRA-201ENST00000257290 LINC00167Q96N53 147 aa4.58□□□□□ -1.68
PDGFRA-201ENST00000257290 A0A087WSZ3 146 aa4.58□□□□□ -1.68
PDGFRA-201ENST00000257290 CNOT1A5YKK6 2376 aaKnown RBP4.58□□□□□ -1.68
PDGFRA-201ENST00000257290 A8MTW9 85 aa4.58□□□□□ -1.68
PDGFRA-201ENST00000257290 Q8NBF4 154 aa4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 CACNA1HO95180 2353 aa4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 ZFHX2Q9C0A1 2572 aaPredicted RBP4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 A0A1W2PPR1 153 aa4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 LINC00315P59091 139 aa4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 ST20-AS1Q8NBB2 130 aa4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 SPTA1P02549 2419 aa4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 RP1L1Q8IWN7 2480 aaPredicted RBP4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 AKAP6Q13023 2319 aa4.57□□□□□ -1.68
PDGFRA-201ENST00000257290 ACACAQ13085 2346 aa4.56□□□□□ -1.68
PDGFRA-201ENST00000257290 OTOGLQ3ZCN5 2332 aa4.56□□□□□ -1.68
PDGFRA-201ENST00000257290 A8MWP4 228 aa4.56□□□□□ -1.68
PDGFRA-201ENST00000257290 SPINK7P58062 85 aa4.56□□□□□ -1.68
PDGFRA-201ENST00000257290 C22orf24Q9Y442 160 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms