RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 LINC00269Q8N2A0 174 aa12.95□□□□□ -0.34
LRP3-201ENST00000253193 NBPF19A0A087WUL8 3843 aa12.94□□□□□ -0.34
LRP3-201ENST00000253193 PRO0255Q9UI72 69 aa12.94□□□□□ -0.34
LRP3-201ENST00000253193 IGHV3OR16-9A0A0B4J2B5 98 aa12.93□□□□□ -0.34
LRP3-201ENST00000253193 DAD1P61803 113 aa12.93□□□□□ -0.34
LRP3-201ENST00000253193 ACYP1P07311 99 aa12.93□□□□□ -0.34
LRP3-201ENST00000253193 OVOL2Q9BRP0 275 aa12.93□□□□□ -0.34
LRP3-201ENST00000253193 IBA57-AS1B1ANH7 110 aa12.93□□□□□ -0.34
LRP3-201ENST00000253193 A0A087WYN8 130 aa12.92□□□□□ -0.34
LRP3-201ENST00000253193 PRR3P79522 188 aaKnown RBP12.92□□□□□ -0.34
LRP3-201ENST00000253193 ATRQ13535 2644 aa12.91□□□□□ -0.34
LRP3-201ENST00000253193 A0A087WZ39 114 aa12.91□□□□□ -0.34
LRP3-201ENST00000253193 H0YGX0 51 aa12.9□□□□□ -0.34
LRP3-201ENST00000253193 S100A7L2Q5SY68 101 aa12.9□□□□□ -0.34
LRP3-201ENST00000253193 C19orf73Q9NVV2 129 aa12.9□□□□□ -0.34
LRP3-201ENST00000253193 FAM240AA0A1B0GVK7 77 aa12.89□□□□□ -0.35
LRP3-201ENST00000253193 RPL28P46779 137 aaKnown RBP12.89□□□□□ -0.35
LRP3-201ENST00000253193 HILS1P60008 231 aa12.89□□□□□ -0.35
LRP3-201ENST00000253193 DEFB121Q5J5C9 76 aa12.89□□□□□ -0.35
LRP3-201ENST00000253193 CSNK1G2-AS1Q8NCQ2 148 aa12.89□□□□□ -0.35
LRP3-201ENST00000253193 ZNF469Q96JG9 3925 aaPredicted RBP12.89□□□□□ -0.35
LRP3-201ENST00000253193 IGKV2-28A0A075B6P5 120 aa12.88□□□□□ -0.35
LRP3-201ENST00000253193 NCR3O14931 201 aa12.88□□□□□ -0.35
LRP3-201ENST00000253193 IGKV2D-28P01615 120 aa12.88□□□□□ -0.35
LRP3-201ENST00000253193 LINC00526Q96FQ7 95 aa12.88□□□□□ -0.35
LRP3-201ENST00000253193 UNC79Q9P2D8 2635 aa12.88□□□□□ -0.35
LRP3-201ENST00000253193 IGKV3D-7A0A0C4DH55 119 aa12.88□□□□□ -0.35
LRP3-201ENST00000253193 J3QKU1 62 aa12.87□□□□□ -0.35
LRP3-201ENST00000253193 LINC00643Q86TS7 51 aa12.87□□□□□ -0.35
LRP3-201ENST00000253193 C16orf95Q9H693 158 aa12.87□□□□□ -0.35
LRP3-201ENST00000253193 C22orf24Q9Y442 160 aa12.87□□□□□ -0.35
LRP3-201ENST00000253193 MRPL23Q16540 153 aaKnown RBP12.86□□□□□ -0.35
LRP3-201ENST00000253193 FAM19A3Q7Z5A8 133 aa12.86□□□□□ -0.35
LRP3-201ENST00000253193 C9orf116Q5BN46 136 aaPredicted RBP12.86□□□□□ -0.35
LRP3-201ENST00000253193 CHCHD10Q8WYQ3 142 aaPredicted RBP12.85□□□□□ -0.35
LRP3-201ENST00000253193 C9orf129Q5T035 196 aaKnown RBP12.85□□□□□ -0.35
LRP3-201ENST00000253193 ORMDL1Q9P0S3 153 aa12.85□□□□□ -0.35
LRP3-201ENST00000253193 Q8N3U1 123 aa12.84□□□□□ -0.35
LRP3-201ENST00000253193 TRBV7-7A0A0K0K1E9 115 aa12.84□□□□□ -0.35
LRP3-201ENST00000253193 HIST1H4AP62805 103 aaKnown RBP12.84□□□□□ -0.35
LRP3-201ENST00000253193 FAM110AQ9BQ89 295 aa12.84□□□□□ -0.35
LRP3-201ENST00000253193 REG3AQ06141 175 aa12.83□□□□□ -0.36
LRP3-201ENST00000253193 SDIM1Q6ZPB5 146 aa12.83□□□□□ -0.36
LRP3-201ENST00000253193 KIR2DL5BQ8NHK3 375 aa12.82□□□□□ -0.36
LRP3-201ENST00000253193 C9orf153Q5TBE3 101 aa12.81□□□□□ -0.36
LRP3-201ENST00000253193 KLK12Q9UKR0 248 aa12.81□□□□□ -0.36
LRP3-201ENST00000253193 KLK5Q9Y337 293 aaPredicted RBP12.8□□□□□ -0.36
LRP3-201ENST00000253193 APOC4P55056 127 aa12.8□□□□□ -0.36
LRP3-201ENST00000253193 C9orf66Q5T8R8 295 aa12.8□□□□□ -0.36
LRP3-201ENST00000253193 IGHV4-28A0A0C4DH34 117 aa12.79□□□□□ -0.36
LRP3-201ENST00000253193 KRTAP1-1Q07627 177 aa12.79□□□□□ -0.36
LRP3-201ENST00000253193 INAFM1C9JVW0 142 aa12.78□□□□□ -0.36
LRP3-201ENST00000253193 Q8IZM0 81 aa12.78□□□□□ -0.36
LRP3-201ENST00000253193 LAMTOR3Q9UHA4 124 aa12.78□□□□□ -0.36
LRP3-201ENST00000253193 X6R8D5 127 aa12.78□□□□□ -0.36
LRP3-201ENST00000253193 LY6G6DO95868 133 aa12.77□□□□□ -0.37
LRP3-201ENST00000253193 CD164L2Q6UWJ8 174 aa12.77□□□□□ -0.37
LRP3-201ENST00000253193 SMIM9A6NGZ8 99 aa12.76□□□□□ -0.37
LRP3-201ENST00000253193 SPAG11BQ08648 103 aa12.76□□□□□ -0.37
LRP3-201ENST00000253193 TMEM126AQ9H061 195 aa12.76□□□□□ -0.37
LRP3-201ENST00000253193 C6orf99Q4VX62 202 aa12.76□□□□□ -0.37
LRP3-201ENST00000253193 LYRM9A8MSI8 78 aa12.75□□□□□ -0.37
LRP3-201ENST00000253193 A0A1B0GUV1 79 aa12.75□□□□□ -0.37
LRP3-201ENST00000253193 KRTAP10-3P60369 221 aa12.75□□□□□ -0.37
LRP3-201ENST00000253193 SPART-AS1P0CW21 52 aa12.74□□□□□ -0.37
LRP3-201ENST00000253193 C6orf223Q8N319 242 aa12.73□□□□□ -0.37
LRP3-201ENST00000253193 RPL18AQ02543 176 aaKnown RBP12.73□□□□□ -0.37
LRP3-201ENST00000253193 UNQ6190/PRO20217Q6UXQ8 127 aa12.73□□□□□ -0.37
LRP3-201ENST00000253193 SPATA3Q8NHX4 192 aa12.73□□□□□ -0.37
LRP3-201ENST00000253193 PPDPFQ9H3Y8 114 aa12.73□□□□□ -0.37
LRP3-201ENST00000253193 CXCL5P42830 114 aa12.72□□□□□ -0.37
LRP3-201ENST00000253193 IMUPQ9GZP8 106 aa12.72□□□□□ -0.37
LRP3-201ENST00000253193 LINC00846Q9NV44 126 aa12.71□□□□□ -0.37
LRP3-201ENST00000253193 XAGE1AQ9HD64 81 aa12.71□□□□□ -0.38
LRP3-201ENST00000253193 CELA1Q9UNI1 258 aa12.71□□□□□ -0.38
LRP3-201ENST00000253193 LOC107984640A0A0U1RRK4 108 aa12.7□□□□□ -0.38
LRP3-201ENST00000253193 A0A087WVE0 104 aa12.7□□□□□ -0.38
LRP3-201ENST00000253193 C3orf22Q8N5N4 141 aa12.7□□□□□ -0.38
LRP3-201ENST00000253193 TENM4Q6N022 2769 aa12.69□□□□□ -0.38
LRP3-201ENST00000253193 A0A1B0GX51 115 aa12.69□□□□□ -0.38
LRP3-201ENST00000253193 FLNBO75369 2602 aaKnown RBP12.68□□□□□ -0.38
LRP3-201ENST00000253193 ZNF561-AS1K7EIQ3 104 aa12.67□□□□□ -0.38
LRP3-201ENST00000253193 TMEM256-PLSCR3K7ERE1 68 aa12.67□□□□□ -0.38
LRP3-201ENST00000253193 HIGD2BQ4VC39 106 aa12.67□□□□□ -0.38
LRP3-201ENST00000253193 CYSTM1Q9H1C7 97 aa12.67□□□□□ -0.38
LRP3-201ENST00000253193 CYSRT1A8MQ03 144 aa12.66□□□□□ -0.38
LRP3-201ENST00000253193 Q8N814 137 aa12.66□□□□□ -0.38
LRP3-201ENST00000253193 TEP1Q99973 2627 aaKnown RBP12.66□□□□□ -0.38
LRP3-201ENST00000253193 VWFP04275 2813 aa12.65□□□□□ -0.38
LRP3-201ENST00000253193 C10orf25Q5T742 122 aa12.65□□□□□ -0.38
LRP3-201ENST00000253193 WFDC9Q8NEX5 89 aa12.65□□□□□ -0.38
LRP3-201ENST00000253193 JMJD7-PLA2G4BH0Y9G9 81 aa12.65□□□□□ -0.38
LRP3-201ENST00000253193 UBL5Q9BZL1 73 aa12.64□□□□□ -0.39
LRP3-201ENST00000253193 hADV29S1A0JD25 119 aa12.64□□□□□ -0.39
LRP3-201ENST00000253193 HAMPP81172 84 aa12.63□□□□□ -0.39
LRP3-201ENST00000253193 UQCRQO14949 82 aa12.63□□□□□ -0.39
LRP3-201ENST00000253193 ATOX1O00244 68 aa12.62□□□□□ -0.39
LRP3-201ENST00000253193 COX17Q14061 63 aa12.62□□□□□ -0.39
LRP3-201ENST00000253193 IGHV4-30-4P0DP06 118 aa12.62□□□□□ -0.39
LRP3-201ENST00000253193 MIFP14174 115 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms