RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 PRR3P79522 188 aaKnown RBP7.12□□□□□ -1.27
COPB1-201ENST00000249923 FAM218AQ96MZ4 157 aa7.12□□□□□ -1.27
COPB1-201ENST00000249923 KMT2BQ9UMN6 2715 aaPredicted RBP7.12□□□□□ -1.27
COPB1-201ENST00000249923 TRACP01848 142 aa7.11□□□□□ -1.27
COPB1-201ENST00000249923 HAMPP81172 84 aa7.11□□□□□ -1.27
COPB1-201ENST00000249923 SMCR5Q8TEV8 140 aa7.11□□□□□ -1.27
COPB1-201ENST00000249923 TRBV10-1A0A0K0K1A3 114 aa7.11□□□□□ -1.27
COPB1-201ENST00000249923 IGLV1-51P01701 117 aa7.11□□□□□ -1.27
COPB1-201ENST00000249923 INAFM2P0DMQ5 153 aa7.1□□□□□ -1.27
COPB1-201ENST00000249923 MALP21145 153 aa7.1□□□□□ -1.27
COPB1-201ENST00000249923 LINC00643Q86TS7 51 aa7.1□□□□□ -1.27
COPB1-201ENST00000249923 C3orf22Q8N5N4 141 aa7.1□□□□□ -1.27
COPB1-201ENST00000249923 IGLV4-60A0A075B6I1 120 aa7.1□□□□□ -1.27
COPB1-201ENST00000249923 KRTAP10-3P60369 221 aa7.1□□□□□ -1.27
COPB1-201ENST00000249923 SPATA3Q8NHX4 192 aa7.1□□□□□ -1.27
COPB1-201ENST00000249923 LAMTOR3Q9UHA4 124 aa7.1□□□□□ -1.27
COPB1-201ENST00000249923 A0A087WYN8 130 aa7.09□□□□□ -1.27
COPB1-201ENST00000249923 C22orf24Q9Y442 160 aa7.09□□□□□ -1.27
COPB1-201ENST00000249923 KIR2DL5BQ8NHK3 375 aa7.09□□□□□ -1.27
COPB1-201ENST00000249923 COPS9Q8WXC6 57 aa7.09□□□□□ -1.27
COPB1-201ENST00000249923 LINC00526Q96FQ7 95 aa7.09□□□□□ -1.27
COPB1-201ENST00000249923 FAM110AQ9BQ89 295 aa7.08□□□□□ -1.28
COPB1-201ENST00000249923 TMEM243Q9BU79 118 aa7.08□□□□□ -1.28
COPB1-201ENST00000249923 HIVEP1P15822 2718 aa7.08□□□□□ -1.28
COPB1-201ENST00000249923 DEFB4AO15263 64 aa7.08□□□□□ -1.28
COPB1-201ENST00000249923 FHL2Q14192 279 aa7.08□□□□□ -1.28
COPB1-201ENST00000249923 HILS1P60008 231 aa7.07□□□□□ -1.28
COPB1-201ENST00000249923 C16orf95Q9H693 158 aa7.07□□□□□ -1.28
COPB1-201ENST00000249923 HECTD1Q9ULT8 2610 aa7.07□□□□□ -1.28
COPB1-201ENST00000249923 UQCRQO14949 82 aa7.07□□□□□ -1.28
COPB1-201ENST00000249923 OVOL2Q9BRP0 275 aa7.07□□□□□ -1.28
COPB1-201ENST00000249923 NSD1Q96L73 2696 aaPredicted RBP7.07□□□□□ -1.28
COPB1-201ENST00000249923 FAM19A5Q7Z5A7 132 aaPredicted RBP7.07□□□□□ -1.28
COPB1-201ENST00000249923 C20orf197Q8N268 126 aa7.07□□□□□ -1.28
COPB1-201ENST00000249923 SMIM11BQ8TCY0 68 aa7.07□□□□□ -1.28
COPB1-201ENST00000249923 C16orf74Q96GX8 76 aa7.07□□□□□ -1.28
COPB1-201ENST00000249923 SMR3AQ99954 134 aa7.07□□□□□ -1.28
COPB1-201ENST00000249923 S100A7L2Q5SY68 101 aa7.06□□□□□ -1.28
COPB1-201ENST00000249923 C9orf129Q5T035 196 aaKnown RBP7.06□□□□□ -1.28
COPB1-201ENST00000249923 IGKV2-28A0A075B6P5 120 aa7.06□□□□□ -1.28
COPB1-201ENST00000249923 TRAV13-2A0A0B4J235 113 aa7.06□□□□□ -1.28
COPB1-201ENST00000249923 IGKV2D-28P01615 120 aa7.06□□□□□ -1.28
COPB1-201ENST00000249923 CXCL5P42830 114 aa7.06□□□□□ -1.28
COPB1-201ENST00000249923 SCXQ7RTU7 201 aa7.06□□□□□ -1.28
COPB1-201ENST00000249923 TRBV6-4A0A1B0GX49 114 aa7.06□□□□□ -1.28
COPB1-201ENST00000249923 COX7B2Q8TF08 81 aa7.06□□□□□ -1.28
COPB1-201ENST00000249923 J3KT08 172 aa7.05□□□□□ -1.28
COPB1-201ENST00000249923 PRB2P02812 416 aaPredicted RBP7.05□□□□□ -1.28
COPB1-201ENST00000249923 LINC00337Q8N6G1 96 aa7.05□□□□□ -1.28
COPB1-201ENST00000249923 ACYP1P07311 99 aa7.05□□□□□ -1.28
COPB1-201ENST00000249923 Q6Q795 121 aa7.05□□□□□ -1.28
COPB1-201ENST00000249923 ENHOQ6UWT2 76 aa7.05□□□□□ -1.28
COPB1-201ENST00000249923 LINC00846Q9NV44 126 aa7.05□□□□□ -1.28
COPB1-201ENST00000249923 IGHV3OR16-9A0A0B4J2B5 98 aa7.04□□□□□ -1.28
COPB1-201ENST00000249923 DEFB121Q5J5C9 76 aa7.04□□□□□ -1.28
COPB1-201ENST00000249923 HRCT1Q6UXD1 115 aa7.04□□□□□ -1.28
COPB1-201ENST00000249923 PKD1L1Q8TDX9 2849 aa7.04□□□□□ -1.28
COPB1-201ENST00000249923 TRBV6-8A0A0A6YYG3 113 aa7.04□□□□□ -1.28
COPB1-201ENST00000249923 ATOX1O00244 68 aa7.03□□□□□ -1.28
COPB1-201ENST00000249923 GHRHP01286 108 aa7.03□□□□□ -1.28
COPB1-201ENST00000249923 USP17L23D6RBM5 183 aa7.03□□□□□ -1.28
COPB1-201ENST00000249923 COX7CP15954 63 aa7.03□□□□□ -1.28
COPB1-201ENST00000249923 C9orf116Q5BN46 136 aaPredicted RBP7.03□□□□□ -1.28
COPB1-201ENST00000249923 CCL18P55774 89 aa7.02□□□□□ -1.29
COPB1-201ENST00000249923 FAM19A1Q7Z5A9 133 aa7.02□□□□□ -1.29
COPB1-201ENST00000249923 SNURFQ9Y675 71 aa7.02□□□□□ -1.29
COPB1-201ENST00000249923 ORMDL1Q9P0S3 153 aa7.02□□□□□ -1.29
COPB1-201ENST00000249923 Q8N3U1 123 aa7.01□□□□□ -1.29
COPB1-201ENST00000249923 LINC00612Q8N6U2 182 aa7.01□□□□□ -1.29
COPB1-201ENST00000249923 X6R8D5 127 aa7.01□□□□□ -1.29
COPB1-201ENST00000249923 CMYA5Q8N3K9 4069 aa7.01□□□□□ -1.29
COPB1-201ENST00000249923 FAM240AA0A1B0GVK7 77 aa7□□□□□ -1.29
COPB1-201ENST00000249923 DAD1P61803 113 aa7□□□□□ -1.29
COPB1-201ENST00000249923 ATRQ13535 2644 aa7□□□□□ -1.29
COPB1-201ENST00000249923 CYSTM1Q9H1C7 97 aa7□□□□□ -1.29
COPB1-201ENST00000249923 A0A087WZ39 114 aa6.99□□□□□ -1.29
COPB1-201ENST00000249923 TRBV7-7A0A0K0K1E9 115 aa6.99□□□□□ -1.29
COPB1-201ENST00000249923 ANGP03950 147 aaKnown RBP6.99□□□□□ -1.29
COPB1-201ENST00000249923 UBL5Q9BZL1 73 aa6.99□□□□□ -1.29
COPB1-201ENST00000249923 RPL18AQ02543 176 aaKnown RBP6.99□□□□□ -1.29
COPB1-201ENST00000249923 C4orf26Q17RF5 130 aa6.99□□□□□ -1.29
COPB1-201ENST00000249923 LINC00269Q8N2A0 174 aa6.99□□□□□ -1.29
COPB1-201ENST00000249923 LINC00482Q8N8I6 264 aa6.99□□□□□ -1.29
COPB1-201ENST00000249923 LINC00959A0A1B0GUT2 108 aa6.98□□□□□ -1.29
COPB1-201ENST00000249923 SMIM9A6NGZ8 99 aa6.98□□□□□ -1.29
COPB1-201ENST00000249923 GYPEP15421 78 aa6.98□□□□□ -1.29
COPB1-201ENST00000249923 TEP1Q99973 2627 aaKnown RBP6.98□□□□□ -1.29
COPB1-201ENST00000249923 RPL28P46779 137 aaKnown RBP6.97□□□□□ -1.29
COPB1-201ENST00000249923 C6orf99Q4VX62 202 aa6.97□□□□□ -1.29
COPB1-201ENST00000249923 CMC4P56277 68 aaPredicted RBP6.96□□□□□ -1.29
COPB1-201ENST00000249923 C1orf43Q9BWL3 253 aa6.96□□□□□ -1.29
COPB1-201ENST00000249923 SS18Q15532 418 aa6.96□□□□□ -1.3
COPB1-201ENST00000249923 RBM3P98179 157 aaKnown RBP6.96□□□□□ -1.3
COPB1-201ENST00000249923 UPK3BQ9BT76 320 aa6.96□□□□□ -1.3
COPB1-201ENST00000249923 PKIGQ9Y2B9 76 aa6.96□□□□□ -1.3
COPB1-201ENST00000249923 SERP2Q8N6R1 65 aa6.95□□□□□ -1.3
COPB1-201ENST00000249923 IMUPQ9GZP8 106 aa6.95□□□□□ -1.3
COPB1-201ENST00000249923 XAGE1AQ9HD64 81 aa6.95□□□□□ -1.3
COPB1-201ENST00000249923 IGHV4-28A0A0C4DH34 117 aa6.95□□□□□ -1.3
COPB1-201ENST00000249923 H0YGX0 51 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms