RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 LINC00959A0A1B0GUT2 108 aa8.87□□□□□ -0.99
VEGFA-201ENST00000230480 GAGE12HA6NDE8 117 aa8.87□□□□□ -0.99
VEGFA-201ENST00000230480 ATP5LO75964 103 aa8.87□□□□□ -0.99
VEGFA-201ENST00000230480 IFI27P40305 119 aaPredicted RBP8.87□□□□□ -0.99
VEGFA-201ENST00000230480 CHCHD10Q8WYQ3 142 aaPredicted RBP8.87□□□□□ -0.99
VEGFA-201ENST00000230480 CSDC2Q9Y534 153 aaKnown RBP8.87□□□□□ -0.99
VEGFA-201ENST00000230480 E9PLD3 99 aa8.86□□□□□ -0.99
VEGFA-201ENST00000230480 RNASE13Q5GAN3 156 aaKnown RBP8.86□□□□□ -0.99
VEGFA-201ENST00000230480 TIMM21Q9BVV7 248 aa8.86□□□□□ -0.99
VEGFA-201ENST00000230480 SRRM2Q9UQ35 2752 aaKnown RBP8.85□□□□□ -0.99
VEGFA-201ENST00000230480 PANO1I0J062 215 aa8.85□□□□□ -0.99
VEGFA-201ENST00000230480 RPL24P83731 157 aaKnown RBP8.85□□□□□ -0.99
VEGFA-201ENST00000230480 Q6ZUT4 128 aa8.85□□□□□ -0.99
VEGFA-201ENST00000230480 KIR2DL4Q99706 377 aa8.85□□□□□ -0.99
VEGFA-201ENST00000230480 CHAC1Q9BUX1 264 aa8.85□□□□□ -0.99
VEGFA-201ENST00000230480 MAP1LC3AQ9H492 121 aa8.85□□□□□ -0.99
VEGFA-201ENST00000230480 NXT2Q9NPJ8 142 aaKnown RBP8.85□□□□□ -0.99
VEGFA-201ENST00000230480 SPANXB1Q9NS25 103 aaPredicted RBP8.85□□□□□ -0.99
VEGFA-201ENST00000230480 FCER1GP30273 86 aa8.84□□□□□ -0.99
VEGFA-201ENST00000230480 NMUP48645 174 aa8.84□□□□□ -0.99
VEGFA-201ENST00000230480 CEND1Q8N111 149 aa8.84□□□□□ -0.99
VEGFA-201ENST00000230480 C9orf163Q8N9P6 203 aa8.84□□□□□ -0.99
VEGFA-201ENST00000230480 RAB37Q96AX2 223 aa8.84□□□□□ -0.99
VEGFA-201ENST00000230480 LOC389332A0A1B0GUA5 103 aa8.83□□□□□ -1
VEGFA-201ENST00000230480 SMR3BP02814 79 aaPredicted RBP8.83□□□□□ -1
VEGFA-201ENST00000230480 SDIM1Q6ZPB5 146 aa8.83□□□□□ -1
VEGFA-201ENST00000230480 Q8N8P6 123 aa8.83□□□□□ -1
VEGFA-201ENST00000230480 PKHD1L1Q86WI1 4243 aa8.83□□□□□ -1
VEGFA-201ENST00000230480 FLG2Q5D862 2391 aaPredicted RBP8.83□□□□□ -1
VEGFA-201ENST00000230480 DPM2O94777 84 aa8.82□□□□□ -1
VEGFA-201ENST00000230480 IGKCP01834 107 aa8.82□□□□□ -1
VEGFA-201ENST00000230480 FXYD2P54710 66 aa8.82□□□□□ -1
VEGFA-201ENST00000230480 CNBPP62633 177 aaKnown RBP8.82□□□□□ -1
VEGFA-201ENST00000230480 ODF1Q14990 250 aa8.82□□□□□ -1
VEGFA-201ENST00000230480 PCP2Q8IVA1 136 aa8.82□□□□□ -1
VEGFA-201ENST00000230480 A0A1B0GWB2 263 aa8.81□□□□□ -1
VEGFA-201ENST00000230480 XCL1P47992 114 aa8.81□□□□□ -1
VEGFA-201ENST00000230480 DGAT2L7PQ6IED9 249 aa8.81□□□□□ -1
VEGFA-201ENST00000230480 VCX2Q9H322 139 aa8.81□□□□□ -1
VEGFA-201ENST00000230480 KRTAP10-4P60372 401 aaPredicted RBP8.8□□□□□ -1
VEGFA-201ENST00000230480 MRPS36P82909 103 aaKnown RBP8.8□□□□□ -1
VEGFA-201ENST00000230480 C14orf177Q52M58 125 aa8.8□□□□□ -1
VEGFA-201ENST00000230480 SCXQ7RTU7 201 aa8.8□□□□□ -1
VEGFA-201ENST00000230480 LINC00526Q96FQ7 95 aa8.8□□□□□ -1
VEGFA-201ENST00000230480 TMEM101Q96IK0 257 aa8.8□□□□□ -1
VEGFA-201ENST00000230480 NAA38Q9BRA0 125 aaKnown RBP8.8□□□□□ -1
VEGFA-201ENST00000230480 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.8□□□□□ -1
VEGFA-201ENST00000230480 GVQW2A0A096LPI5 108 aaPredicted RBP8.79□□□□□ -1
VEGFA-201ENST00000230480 HIGD2BQ4VC39 106 aa8.79□□□□□ -1
VEGFA-201ENST00000230480 ZC2HC1BQ5TFG8 222 aa8.79□□□□□ -1
VEGFA-201ENST00000230480 CD164L2Q6UWJ8 174 aa8.79□□□□□ -1
VEGFA-201ENST00000230480 PYGO1Q9Y3Y4 419 aa8.79□□□□□ -1
VEGFA-201ENST00000230480 IGLV4-3A0A075B6K6 122 aa8.78□□□□□ -1
VEGFA-201ENST00000230480 IGIPA6NJ69 53 aa8.78□□□□□ -1
VEGFA-201ENST00000230480 SMAGPQ0VAQ4 97 aa8.78□□□□□ -1
VEGFA-201ENST00000230480 LYRM7Q5U5X0 104 aa8.78□□□□□ -1
VEGFA-201ENST00000230480 CIRBP-AS1Q8TBR5 109 aa8.78□□□□□ -1
VEGFA-201ENST00000230480 SPANXA1Q9NS26 97 aa8.78□□□□□ -1
VEGFA-201ENST00000230480 NHP2Q9NX24 153 aaKnown RBP8.78□□□□□ -1
VEGFA-201ENST00000230480 TRAV13-1A0A0B4J241 112 aa8.77□□□□□ -1.01
VEGFA-201ENST00000230480 PLNP26678 52 aa8.77□□□□□ -1.01
VEGFA-201ENST00000230480 CKS1BP61024 79 aa8.77□□□□□ -1.01
VEGFA-201ENST00000230480 COX6A2Q02221 97 aa8.77□□□□□ -1.01
VEGFA-201ENST00000230480 CIRBPQ14011 172 aaKnown RBP8.77□□□□□ -1.01
VEGFA-201ENST00000230480 PRO0461Q9UI25 63 aa8.77□□□□□ -1.01
VEGFA-201ENST00000230480 MYCBP2O75592 4640 aa8.77□□□□□ -1.01
VEGFA-201ENST00000230480 TRAV12-1A0A0B4J245 112 aa8.76□□□□□ -1.01
VEGFA-201ENST00000230480 IGHV3OR16-9A0A0B4J2B5 98 aa8.76□□□□□ -1.01
VEGFA-201ENST00000230480 EPM2AB3EWF7 344 aa8.76□□□□□ -1.01
VEGFA-201ENST00000230480 SS18Q15532 418 aa8.76□□□□□ -1.01
VEGFA-201ENST00000230480 CYSLTR1Q9Y271 337 aa8.76□□□□□ -1.01
VEGFA-201ENST00000230480 IGKV2D-26A0A0A0MRZ7 120 aa8.75□□□□□ -1.01
VEGFA-201ENST00000230480 A6NJY4 79 aa8.75□□□□□ -1.01
VEGFA-201ENST00000230480 H3BMG7 143 aa8.75□□□□□ -1.01
VEGFA-201ENST00000230480 C2orf66Q6UXQ4 117 aa8.75□□□□□ -1.01
VEGFA-201ENST00000230480 AMELXQ99217 191 aa8.75□□□□□ -1.01
VEGFA-201ENST00000230480 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.74□□□□□ -1.01
VEGFA-201ENST00000230480 CHTF8P0CG12 524 aa8.74□□□□□ -1.01
VEGFA-201ENST00000230480 LINC00242Q5T6M2 205 aa8.74□□□□□ -1.01
VEGFA-201ENST00000230480 Q5VSD8 79 aa8.74□□□□□ -1.01
VEGFA-201ENST00000230480 C5orf38Q86SI9 138 aa8.74□□□□□ -1.01
VEGFA-201ENST00000230480 IGHV1-58A0A0C4DH39 117 aa8.73□□□□□ -1.01
VEGFA-201ENST00000230480 K7EMI3 77 aa8.73□□□□□ -1.01
VEGFA-201ENST00000230480 K7ERJ3 54 aa8.73□□□□□ -1.01
VEGFA-201ENST00000230480 LRP1Q07954 4544 aaKnown RBP8.72□□□□□ -1.01
VEGFA-201ENST00000230480 UBE2D1P51668 147 aa8.72□□□□□ -1.01
VEGFA-201ENST00000230480 CFAP161Q6P656 301 aa8.72□□□□□ -1.01
VEGFA-201ENST00000230480 FAT3Q8TDW7 4589 aa8.71□□□□□ -1.01
VEGFA-201ENST00000230480 APOMO95445 188 aa8.71□□□□□ -1.02
VEGFA-201ENST00000230480 KIAA0087Q14695 138 aa8.71□□□□□ -1.02
VEGFA-201ENST00000230480 ETDBQ3ZM63 59 aa8.71□□□□□ -1.02
VEGFA-201ENST00000230480 ORMDL2Q53FV1 153 aa8.71□□□□□ -1.02
VEGFA-201ENST00000230480 FAM19A3Q7Z5A8 133 aa8.71□□□□□ -1.02
VEGFA-201ENST00000230480 TOMM6Q96B49 74 aa8.71□□□□□ -1.02
VEGFA-201ENST00000230480 TMEM141Q96I45 108 aa8.71□□□□□ -1.02
VEGFA-201ENST00000230480 HIST1H4GQ99525 98 aa8.71□□□□□ -1.02
VEGFA-201ENST00000230480 IGLV4-69A0A075B6H9 119 aa8.7□□□□□ -1.02
VEGFA-201ENST00000230480 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
VEGFA-201ENST00000230480 F8VRH5 84 aa8.7□□□□□ -1.02
VEGFA-201ENST00000230480 M0QXV9 152 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms