RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 SOSTDC1Q6X4U4 206 aa9.71□□□□□ -0.85
RTFDC1-201ENST00000023939 KLK12Q9UKR0 248 aa9.71□□□□□ -0.85
RTFDC1-201ENST00000023939 ANK2Q01484 3957 aa9.71□□□□□ -0.86
RTFDC1-201ENST00000023939 CXCL5P42830 114 aa9.7□□□□□ -0.86
RTFDC1-201ENST00000023939 KIAA0087Q14695 138 aa9.7□□□□□ -0.86
RTFDC1-201ENST00000023939 TRBV20-1A0A075B6N2 111 aa9.7□□□□□ -0.86
RTFDC1-201ENST00000023939 NPC2P61916 151 aa9.7□□□□□ -0.86
RTFDC1-201ENST00000023939 WFDC10BQ8IUB3 73 aa9.7□□□□□ -0.86
RTFDC1-201ENST00000023939 C15orf53Q8NAA6 179 aa9.7□□□□□ -0.86
RTFDC1-201ENST00000023939 KLK5Q9Y337 293 aaPredicted RBP9.7□□□□□ -0.86
RTFDC1-201ENST00000023939 IGLV10-54A0A075B6I4 117 aa9.69□□□□□ -0.86
RTFDC1-201ENST00000023939 MRAPQ8TCY5 172 aa9.69□□□□□ -0.86
RTFDC1-201ENST00000023939 LOC107984156A0A0G2JMH3 177 aa9.68□□□□□ -0.86
RTFDC1-201ENST00000023939 TRBV30A0A0K0K1B3 111 aa9.68□□□□□ -0.86
RTFDC1-201ENST00000023939 A0A0U1RRA0 63 aa9.68□□□□□ -0.86
RTFDC1-201ENST00000023939 GAGE12HA6NDE8 117 aa9.68□□□□□ -0.86
RTFDC1-201ENST00000023939 MALP21145 153 aa9.68□□□□□ -0.86
RTFDC1-201ENST00000023939 ARL17AQ8IVW1 177 aa9.68□□□□□ -0.86
RTFDC1-201ENST00000023939 F8W1H4 67 aa9.68□□□□□ -0.86
RTFDC1-201ENST00000023939 LINC01556Q5JQF7 62 aa9.68□□□□□ -0.86
RTFDC1-201ENST00000023939 MIR7-3HGQ8N6C7 128 aa9.68□□□□□ -0.86
RTFDC1-201ENST00000023939 NOTCH1P46531 2555 aa9.67□□□□□ -0.86
RTFDC1-201ENST00000023939 H3BMG7 143 aa9.67□□□□□ -0.86
RTFDC1-201ENST00000023939 CRPP02741 224 aa9.67□□□□□ -0.86
RTFDC1-201ENST00000023939 TENM3Q9P273 2699 aa9.66□□□□□ -0.86
RTFDC1-201ENST00000023939 LINC00158P58513 81 aa9.66□□□□□ -0.86
RTFDC1-201ENST00000023939 CKS1BP61024 79 aa9.66□□□□□ -0.86
RTFDC1-201ENST00000023939 CFAP161Q6P656 301 aa9.66□□□□□ -0.86
RTFDC1-201ENST00000023939 UBE2WQ96B02 151 aa9.65□□□□□ -0.86
RTFDC1-201ENST00000023939 PRO0461Q9UI25 63 aa9.65□□□□□ -0.86
RTFDC1-201ENST00000023939 FBN3Q75N90 2809 aa9.65□□□□□ -0.87
RTFDC1-201ENST00000023939 PSMB2P49721 201 aa9.65□□□□□ -0.87
RTFDC1-201ENST00000023939 COX17Q14061 63 aa9.65□□□□□ -0.87
RTFDC1-201ENST00000023939 Q1RN00 199 aa9.65□□□□□ -0.87
RTFDC1-201ENST00000023939 H7C2G1 150 aa9.64□□□□□ -0.87
RTFDC1-201ENST00000023939 TCL1BO95988 128 aa9.64□□□□□ -0.87
RTFDC1-201ENST00000023939 DNAH10OSP0CZ25 163 aa9.64□□□□□ -0.87
RTFDC1-201ENST00000023939 SCGB1C2P0DMR2 95 aa9.64□□□□□ -0.87
RTFDC1-201ENST00000023939 RPL13AP40429 203 aaKnown RBP9.64□□□□□ -0.87
RTFDC1-201ENST00000023939 KRTAP26-1Q6PEX3 210 aa9.64□□□□□ -0.87
RTFDC1-201ENST00000023939 C2orf82Q6UX34 121 aa9.64□□□□□ -0.87
RTFDC1-201ENST00000023939 TRIAP1O43715 76 aa9.62□□□□□ -0.87
RTFDC1-201ENST00000023939 PFN2P35080 140 aa9.62□□□□□ -0.87
RTFDC1-201ENST00000023939 CCL18P55774 89 aa9.62□□□□□ -0.87
RTFDC1-201ENST00000023939 MUC7Q8TAX7 377 aa9.62□□□□□ -0.87
RTFDC1-201ENST00000023939 B9D2Q9BPU9 175 aa9.62□□□□□ -0.87
RTFDC1-201ENST00000023939 SPAG11BQ08648 103 aa9.62□□□□□ -0.87
RTFDC1-201ENST00000023939 SND1-IT1Q9HBX3 110 aa9.62□□□□□ -0.87
RTFDC1-201ENST00000023939 NBEAL1Q6ZS30 2694 aa9.61□□□□□ -0.87
RTFDC1-201ENST00000023939 MGAM2Q2M2H8 2515 aa9.61□□□□□ -0.87
RTFDC1-201ENST00000023939 TRAV13-2A0A0B4J235 113 aa9.61□□□□□ -0.87
RTFDC1-201ENST00000023939 COX6CP09669 75 aa9.61□□□□□ -0.87
RTFDC1-201ENST00000023939 OCIAD2Q56VL3 154 aa9.6□□□□□ -0.87
RTFDC1-201ENST00000023939 GVQW2A0A096LPI5 108 aaPredicted RBP9.59□□□□□ -0.87
RTFDC1-201ENST00000023939 WFDC2Q14508 124 aa9.59□□□□□ -0.87
RTFDC1-201ENST00000023939 IGKV2-28A0A075B6P5 120 aa9.59□□□□□ -0.87
RTFDC1-201ENST00000023939 IGKV2D-28P01615 120 aa9.59□□□□□ -0.87
RTFDC1-201ENST00000023939 ATXN8Q156A1 80 aa9.59□□□□□ -0.87
RTFDC1-201ENST00000023939 NTN5Q8WTR8 489 aaPredicted RBP9.59□□□□□ -0.87
RTFDC1-201ENST00000023939 LINC00588Q9Y4M8 146 aa9.59□□□□□ -0.87
RTFDC1-201ENST00000023939 HUWE1Q7Z6Z7 4374 aaKnown RBP9.58□□□□□ -0.88
RTFDC1-201ENST00000023939 UPK3BQ9BT76 320 aa9.58□□□□□ -0.88
RTFDC1-201ENST00000023939 M0QXV9 152 aa9.57□□□□□ -0.88
RTFDC1-201ENST00000023939 SMCPP49901 116 aaPredicted RBP9.56□□□□□ -0.88
RTFDC1-201ENST00000023939 UNQ6190/PRO20217Q6UXQ8 127 aa9.56□□□□□ -0.88
RTFDC1-201ENST00000023939 LINC01600Q96MT4 127 aa9.56□□□□□ -0.88
RTFDC1-201ENST00000023939 C1orf43Q9BWL3 253 aa9.56□□□□□ -0.88
RTFDC1-201ENST00000023939 K7ERU9 68 aa9.56□□□□□ -0.88
RTFDC1-201ENST00000023939 NDUFC2O95298 119 aa9.56□□□□□ -0.88
RTFDC1-201ENST00000023939 C6orf223Q8N319 242 aa9.56□□□□□ -0.88
RTFDC1-201ENST00000023939 LINC00337Q8N6G1 96 aa9.56□□□□□ -0.88
RTFDC1-201ENST00000023939 F8WDY8 70 aa9.55□□□□□ -0.88
RTFDC1-201ENST00000023939 RPL28P46779 137 aaKnown RBP9.55□□□□□ -0.88
RTFDC1-201ENST00000023939 C10orf25Q5T742 122 aa9.55□□□□□ -0.88
RTFDC1-201ENST00000023939 NHLRC4P0CG21 123 aaPredicted RBP9.54□□□□□ -0.88
RTFDC1-201ENST00000023939 LINC01620Q4KN68 170 aa9.54□□□□□ -0.88
RTFDC1-201ENST00000023939 C2orf48Q96LS8 159 aa9.54□□□□□ -0.88
RTFDC1-201ENST00000023939 LST1O00453 97 aa9.53□□□□□ -0.88
RTFDC1-201ENST00000023939 C9orf116Q5BN46 136 aaPredicted RBP9.53□□□□□ -0.88
RTFDC1-201ENST00000023939 MTURNQ8N3F0 131 aa9.53□□□□□ -0.88
RTFDC1-201ENST00000023939 C15orf56Q8N910 161 aa9.53□□□□□ -0.88
RTFDC1-201ENST00000023939 ZNF561-AS1K7EIQ3 104 aa9.52□□□□□ -0.89
RTFDC1-201ENST00000023939 ETDBQ3ZM63 59 aa9.52□□□□□ -0.89
RTFDC1-201ENST00000023939 IGKV2D-24A0A075B6R9 120 aa9.51□□□□□ -0.89
RTFDC1-201ENST00000023939 C9JAW5 83 aa9.51□□□□□ -0.89
RTFDC1-201ENST00000023939 LINC00526Q96FQ7 95 aa9.51□□□□□ -0.89
RTFDC1-201ENST00000023939 C6orf48Q9UBA6 75 aa9.51□□□□□ -0.89
RTFDC1-201ENST00000023939 TRBV10-2A0A0K0K1G8 114 aa9.51□□□□□ -0.89
RTFDC1-201ENST00000023939 SLC25A20O43772 301 aa9.51□□□□□ -0.89
RTFDC1-201ENST00000023939 CLEC2BQ92478 149 aa9.51□□□□□ -0.89
RTFDC1-201ENST00000023939 TEN1Q86WV5 123 aa9.49□□□□□ -0.89
RTFDC1-201ENST00000023939 SMIM11BQ8TCY0 68 aa9.49□□□□□ -0.89
RTFDC1-201ENST00000023939 RMI2Q96E14 147 aa9.49□□□□□ -0.89
RTFDC1-201ENST00000023939 CAMK2N2Q96S95 79 aa9.49□□□□□ -0.89
RTFDC1-201ENST00000023939 HIGD2BQ4VC39 106 aa9.48□□□□□ -0.89
RTFDC1-201ENST00000023939 CBY1Q9Y3M2 126 aa9.48□□□□□ -0.89
RTFDC1-201ENST00000023939 H3BT86 120 aa9.48□□□□□ -0.89
RTFDC1-201ENST00000023939 TRACP01848 142 aa9.48□□□□□ -0.89
RTFDC1-201ENST00000023939 ANKRD29Q8N6D5 301 aa9.48□□□□□ -0.89
RTFDC1-201ENST00000023939 APLNQ9ULZ1 77 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms