RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Prr13Q9CQJ5 137 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Ap5s1Q9D742 170 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Nat8Q9JIY7 227 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Cryba4Q9JJV0 196 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Chst4Q9R1I1 388 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 RbmxQ9WV02 391 aaKnown RBP6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Pla2g2dQ9WVF6 144 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm10521E9PZK0 135 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Rab18P35293 206 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Atp6v0cP63082 155 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 BaxQ07813 192 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Wipf2Q6PEV3 440 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr917Q7TRC3 309 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm17334Q8C6U3 126 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 D630044L22RikQ8C701 164 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Rpp21Q8R040 150 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Vmn1r226Q8R2A8 298 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr1271Q8VG62 305 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Msmo1Q9CRA4 293 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Mrpl52Q9D0Y8 121 aa6.57□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm45871A0A1B0GRI9 540 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Igkv4-51A0N8I8 119 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Nat8f7E0CYR6 227 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 P04212 136 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 CrygdP04342 174 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 FusP56959 518 aaKnown RBP6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 CycsP62897 105 aaKnown RBP6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Tpt1P63028 172 aaKnown RBP6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Commd3Q63829 195 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr963Q7TRA9 311 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Megf9Q8BH27 600 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 9230109A22RikQ8BHE6 111 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 C030005K15RikQ8BQN9 115 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr112Q8C0S2 320 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Arrdc1Q99KN1 434 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Rab32Q9CZE3 223 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Cox20Q9D7J4 117 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Xlr5cQ9JJR2 179 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Trav15-2-dv6-2A0A075B650 123 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Trbv19A0A0B4J1H4 117 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm44596A0A0N4SVA0 210 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Cd209gD3Z5D4 194 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm17669F6QL70 154 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Vmn1r78K7N608 313 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 H2-M10.1O19443 331 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 P01881 257 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Ifna6P07350 189 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Csn2P10598 231 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 MyocosQ3UWS6 143 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Oosp2Q4FZG8 168 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Trp53rkaQ5U452 244 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Srsf12Q8C8K3 266 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Poc1aQ8JZX3 405 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Arl6ip5Q8R5J9 188 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 TctaQ8VEA7 122 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr1183Q8VFF8 303 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Mpped1Q91ZG2 326 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Nmnat3Q99JR6 245 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Elp5Q99L85 300 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Tp53rkQ99PW4 244 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Shisal2bQ9D1Y9 158 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gp2Q9D733 531 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Ccl24Q9JKC0 119 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 SelenokQ9JLJ1 94 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Cldn34c3J3QJW5 233 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Cldn34c2J3QNM1 233 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Oprk1P33534 380 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Dynlt3P56387 116 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Ctdsp1P58466 261 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Esp1Q3LHH8 102 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 RprmlQ3URD2 117 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm10188Q3V432 135 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Mob4Q6PEB6 225 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Cldn34c1Q8K193 234 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr262Q8VFV8 312 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr491Q8VG06 310 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr473Q8VG44 310 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Bex3Q9WTZ9 124 aa6.56□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr869E9PX82 323 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm21974F6W3F3 119 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Mmp23O88676 391 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Hbb-bh1P04444 147 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr761Q7TRJ0 323 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr134Q8VG95 312 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr33Q8VGX7 318 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Insig2Q91WG1 225 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Derl1Q99J56 251 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Mtfp1Q9CRB8 166 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Esm1Q9QYY7 184 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 St6galnac3Q9WUV2 305 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr1369-ps1A0A140T8K7 317 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm17727E9Q4V7 109 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 BsgP18572 389 aaKnown RBP6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 ApohQ01339 345 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Runx1Q03347 451 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Pilrb2Q2YFS1 225 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Nupr2Q497P3 102 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Trav3-1Q5R1I8 114 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Gm9961Q8BNV2 113 aa6.55□□□□□ -1.36
Trim39-205ENSMUST00000173369 Olfr1445Q8VFW9 314 aa6.55□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 381.4 ms