RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Fgf5P15656 264 aa18.09■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Ido2Q8R0V5 405 aa18.09■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Insig2Q91WG1 225 aa18.09■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Gpa33Q9JKA5 319 aa18.09■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Psg18B2RSG7 476 aa18.08■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Nutf2P61971 127 aa18.08■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Znf474Q6V5K9 347 aa18.08■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Olfr1434Q7TQR9 312 aa18.08■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Rbfox2Q8BP71 449 aaKnown RBP18.08■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Tcrg-V4A0A0B4J1J8 138 aa18.07■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Myo18bE9PV66 2605 aa18.07■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Cnih1O35372 144 aa18.07■□□□□ 0.48
Upf3a-201ENSMUST00000043767 ErhP84089 104 aa18.07■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Gm10803Q3TZS6 135 aa18.07■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Zfand3Q497H0 227 aa18.07■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Cd52Q64389 74 aa18.07■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Olfr984Q8VFN1 314 aa18.07■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Olfr346Q8VGJ7 309 aa18.07■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Ms4a6bQ99N09 244 aa18.07■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Olfr624F8VQI7 308 aa18.07■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Acrv1P50289 261 aa18.07■□□□□ 0.48
Upf3a-201ENSMUST00000043767 SeleQ00690 612 aa18.07■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Pafah1b2Q61206 229 aa18.07■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Chchd1Q9CQA6 118 aa18.07■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Prrc2aQ7TSC1 2158 aaKnown RBP18.06■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Ighv5-6A0A075B5Q0 117 aa18.06■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Ighv8-9A0A0G2JET1 119 aa18.06■□□□□ 0.48
Upf3a-201ENSMUST00000043767 NdpP48744 131 aa18.06■□□□□ 0.48
Upf3a-201ENSMUST00000043767 RhobP62746 196 aa18.06■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Fa2hQ5MPP0 372 aa18.06■□□□□ 0.48
Upf3a-201ENSMUST00000043767 5730522E02RikQ5SP45 163 aa18.06■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Vstm2aQ8R0A6 236 aa18.06■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Ighv1-55A0A075B5W6 117 aa18.05■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Gm15557A6PWY0 234 aa18.05■□□□□ 0.48
Upf3a-201ENSMUST00000043767 P01643 108 aa18.05■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Reg1P43137 165 aa18.05■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Tmem88bQ3TYP4 173 aa18.05■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Gata4Q08369 441 aa18.05■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Prss3Q792Z0 246 aaKnown RBP18.05■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Nit1Q8VDK1 323 aa18.05■□□□□ 0.48
Upf3a-201ENSMUST00000043767 BsnO88737 3942 aa18.04■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Olfr1016A2ASV2 309 aa18.04■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Gm10130F6ZHM5 101 aa18.04■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Lgals3P16110 264 aaKnown RBP18.04■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Olfr1246Q7TQZ6 314 aa18.04■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Gm5868Q8BJG1 145 aa18.04■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Klre1Q8CJC7 226 aa18.04■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Olfr495Q8VF12 330 aa18.04■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Higd1bQ99JY6 98 aa18.04■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Pdzd2E9Q1M1 2796 aa18.04■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Rif1Q6PR54 2419 aaKnown RBP18.04■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Efnb3O35393 340 aa18.03■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Spint3Q3UW09 88 aa18.03■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Slc25a48Q8BW66 306 aa18.03■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Chac2Q9CQG1 178 aa18.03■□□□□ 0.48
Upf3a-201ENSMUST00000043767 1700008P02RikQ9DAJ8 175 aa18.03■□□□□ 0.48
Upf3a-201ENSMUST00000043767 CompQ9R0G6 755 aa18.03■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Muc4Q8JZM8 3443 aa18.03■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Helz2E9QAM5 2947 aaKnown RBP18.03■□□□□ 0.48
Upf3a-201ENSMUST00000043767 D830044I16RikA0A1D5RM53 117 aa18.03■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Gm21732J3QM79 361 aa18.03■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Gm21921J3QNB5 361 aa18.03■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Lrcol1Q3URS3 161 aa18.03■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Rnase2aQ8K196 155 aa18.03■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Prelid1Q8R107 217 aa18.03■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Gosr1O88630 250 aa18.02■□□□□ 0.48
Upf3a-201ENSMUST00000043767 P01788 123 aa18.02■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Evi2aP20934 223 aa18.02■□□□□ 0.48
Upf3a-201ENSMUST00000043767 Gm16686Q3UMN9 131 aa18.02■□□□□ 0.48
Upf3a-201ENSMUST00000043767 P01790 122 aa18.02■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Smug1Q6P5C5 279 aa18.02■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Gm17334Q8C6U3 126 aa18.02■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Olfr1323Q8VF35 309 aa18.02■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Olfr1024A2ASU7 327 aa18.01■□□□□ 0.47
Upf3a-201ENSMUST00000043767 LfngO09010 378 aa18.01■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Edn2P22389 175 aa18.01■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Q9CX63 252 aa18.01■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Ighv7-3A0A075B5R2 120 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Tcf21O35437 179 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Mmp23O88676 391 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 RanP62827 216 aaKnown RBP18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Gm5468Q8C3D3 155 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Olfr1242Q8VGM6 306 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Gng10Q9CXP8 68 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Olfr972Q9EQA2 314 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Trav17A0A075B655 113 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Ighv1-69A0A0G2JFS5 117 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Gm17660B9UIU9 90 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 1500009C09RikD3YYW9 81 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Gsx1P31315 261 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Loxl2P58022 776 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 MiaQ61865 130 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 6030452D12RikQ8CD33 222 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Nicn1Q9CQM0 213 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 CklfQ9DAS1 152 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Gpr35Q9ES90 307 aa18■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Tmem29A2ANF5 204 aa17.99■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Vmn1r149E9PWL6 307 aa17.99■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Vmn1r101E9Q365 307 aa17.99■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Vmn1r158G3UY92 307 aa17.99■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 78.9 ms