RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 TMEM238C9JI98 176 aa6.72□□□□□ -1.33
PHGDH-215ENST00000641371 TIMM17BO60830 172 aa6.72□□□□□ -1.33
PHGDH-215ENST00000641371 TCTAP57738 103 aa6.72□□□□□ -1.33
PHGDH-215ENST00000641371 HERV-K104P63124 156 aa6.72□□□□□ -1.33
PHGDH-215ENST00000641371 ZFAND6Q6FIF0 208 aa6.72□□□□□ -1.33
PHGDH-215ENST00000641371 TM2D2Q9BX73 214 aa6.72□□□□□ -1.33
PHGDH-215ENST00000641371 TP73-AS1Q9UF72 201 aa6.72□□□□□ -1.33
PHGDH-215ENST00000641371 CDKN2A-AS1Q9UH64 79 aa6.72□□□□□ -1.33
PHGDH-215ENST00000641371 MGAM2Q2M2H8 2515 aa6.71□□□□□ -1.34
PHGDH-215ENST00000641371 IGLV4-60A0A075B6I1 120 aa6.71□□□□□ -1.34
PHGDH-215ENST00000641371 LINC00959A0A1B0GUT2 108 aa6.71□□□□□ -1.34
PHGDH-215ENST00000641371 CIRBPQ14011 172 aaKnown RBP6.71□□□□□ -1.34
PHGDH-215ENST00000641371 LYPD5Q6UWN5 251 aa6.71□□□□□ -1.34
PHGDH-215ENST00000641371 CEND1Q8N111 149 aa6.71□□□□□ -1.34
PHGDH-215ENST00000641371 MAPKAPK5-AS1Q8N8E1 139 aa6.71□□□□□ -1.34
PHGDH-215ENST00000641371 HIST1H4GQ99525 98 aa6.71□□□□□ -1.34
PHGDH-215ENST00000641371 NOTCH1P46531 2555 aa6.7□□□□□ -1.34
PHGDH-215ENST00000641371 A0A087WZ39 114 aa6.7□□□□□ -1.34
PHGDH-215ENST00000641371 TRAV8-4A0A0B4J246 113 aa6.7□□□□□ -1.34
PHGDH-215ENST00000641371 A0A0J9YXY3 114 aa6.7□□□□□ -1.34
PHGDH-215ENST00000641371 NDUFA1O15239 70 aa6.7□□□□□ -1.34
PHGDH-215ENST00000641371 NANOS2P60321 138 aaKnown RBP6.7□□□□□ -1.34
PHGDH-215ENST00000641371 SRSF9Q13242 221 aaKnown RBP eCLIP6.7□□□□□ -1.34
PHGDH-215ENST00000641371 NDUFA12Q9UI09 145 aa6.7□□□□□ -1.34
PHGDH-215ENST00000641371 IGHV3OR16-9A0A0B4J2B5 98 aa6.69□□□□□ -1.34
PHGDH-215ENST00000641371 SMIM1B2RUZ4 78 aa6.69□□□□□ -1.34
PHGDH-215ENST00000641371 ANGP03950 147 aaKnown RBP6.69□□□□□ -1.34
PHGDH-215ENST00000641371 SPINK8P0C7L1 97 aa6.69□□□□□ -1.34
PHGDH-215ENST00000641371 PTTG1IPP53801 180 aa6.69□□□□□ -1.34
PHGDH-215ENST00000641371 CD164L2Q6UWJ8 174 aa6.69□□□□□ -1.34
PHGDH-215ENST00000641371 TTTY13Q9BZ97 58 aa6.69□□□□□ -1.34
PHGDH-215ENST00000641371 PPDPFQ9H3Y8 114 aa6.69□□□□□ -1.34
PHGDH-215ENST00000641371 APOMO95445 188 aa6.68□□□□□ -1.34
PHGDH-215ENST00000641371 CRPP02741 224 aa6.68□□□□□ -1.34
PHGDH-215ENST00000641371 PRB2P02812 416 aaPredicted RBP6.68□□□□□ -1.34
PHGDH-215ENST00000641371 IFITM1P13164 125 aa6.68□□□□□ -1.34
PHGDH-215ENST00000641371 CXCL5P42830 114 aa6.68□□□□□ -1.34
PHGDH-215ENST00000641371 TSPEAR-AS2P59090 65 aa6.68□□□□□ -1.34
PHGDH-215ENST00000641371 COX6A2Q02221 97 aa6.68□□□□□ -1.34
PHGDH-215ENST00000641371 REG3AQ06141 175 aa6.68□□□□□ -1.34
PHGDH-215ENST00000641371 PRR34Q9NV39 138 aa6.68□□□□□ -1.34
PHGDH-215ENST00000641371 TRAV8-3A0A0A6YYJ7 113 aa6.67□□□□□ -1.34
PHGDH-215ENST00000641371 K7EP13 123 aa6.67□□□□□ -1.34
PHGDH-215ENST00000641371 SMIM13P0DJ93 91 aa6.67□□□□□ -1.34
PHGDH-215ENST00000641371 RPL24P83731 157 aaKnown RBP6.67□□□□□ -1.34
PHGDH-215ENST00000641371 LINC01556Q5JQF7 62 aa6.67□□□□□ -1.34
PHGDH-215ENST00000641371 LINC00269Q8N2A0 174 aa6.67□□□□□ -1.34
PHGDH-215ENST00000641371 SPANXDQ9BXN6 97 aa6.67□□□□□ -1.34
PHGDH-215ENST00000641371 SPANXCQ9NY87 97 aa6.67□□□□□ -1.34
PHGDH-215ENST00000641371 HUWE1Q7Z6Z7 4374 aaKnown RBP6.66□□□□□ -1.34
PHGDH-215ENST00000641371 IGHV3-64A0A075B6Q5 118 aa6.66□□□□□ -1.34
PHGDH-215ENST00000641371 IGKV3OR2-268A0A0C4DH90 116 aa6.66□□□□□ -1.34
PHGDH-215ENST00000641371 COX7A2LO14548 114 aa6.66□□□□□ -1.34
PHGDH-215ENST00000641371 CCL18P55774 89 aa6.66□□□□□ -1.34
PHGDH-215ENST00000641371 MIAQ16674 131 aa6.66□□□□□ -1.34
PHGDH-215ENST00000641371 COX7B2Q8TF08 81 aa6.66□□□□□ -1.34
PHGDH-215ENST00000641371 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.65□□□□□ -1.34
PHGDH-215ENST00000641371 PRSS2P07478 247 aa6.65□□□□□ -1.34
PHGDH-215ENST00000641371 Q8IZM0 81 aa6.65□□□□□ -1.34
PHGDH-215ENST00000641371 C10orf126Q8N4M7 172 aa6.65□□□□□ -1.34
PHGDH-215ENST00000641371 MUC7Q8TAX7 377 aa6.65□□□□□ -1.34
PHGDH-215ENST00000641371 COX11Q9Y6N1 276 aa6.65□□□□□ -1.34
PHGDH-215ENST00000641371 A0A1B0GWB2 263 aa6.64□□□□□ -1.35
PHGDH-215ENST00000641371 IGHV3-30P01768 117 aa6.64□□□□□ -1.35
PHGDH-215ENST00000641371 DNAH10OSP0CZ25 163 aa6.64□□□□□ -1.35
PHGDH-215ENST00000641371 IGHV3-30-5P0DP03 117 aa6.64□□□□□ -1.35
PHGDH-215ENST00000641371 XCL1P47992 114 aa6.64□□□□□ -1.35
PHGDH-215ENST00000641371 FXYD2P54710 66 aa6.64□□□□□ -1.35
PHGDH-215ENST00000641371 ESRGQ1W209 222 aa6.64□□□□□ -1.35
PHGDH-215ENST00000641371 CHCHD10Q8WYQ3 142 aaPredicted RBP6.64□□□□□ -1.35
PHGDH-215ENST00000641371 ZNF625Q96I27 306 aaPredicted RBP6.64□□□□□ -1.35
PHGDH-215ENST00000641371 Q9H8V8 135 aa6.64□□□□□ -1.35
PHGDH-215ENST00000641371 MALP21145 153 aa6.63□□□□□ -1.35
PHGDH-215ENST00000641371 LYRM7Q5U5X0 104 aa6.63□□□□□ -1.35
PHGDH-215ENST00000641371 UPK3BQ9BT76 320 aa6.63□□□□□ -1.35
PHGDH-215ENST00000641371 KLK12Q9UKR0 248 aa6.63□□□□□ -1.35
PHGDH-215ENST00000641371 DNAH9Q9NYC9 4486 aa6.62□□□□□ -1.35
PHGDH-215ENST00000641371 NUPR2A6NF83 97 aa6.62□□□□□ -1.35
PHGDH-215ENST00000641371 C9orf118A6NHY6 69 aa6.62□□□□□ -1.35
PHGDH-215ENST00000641371 IBA57-AS1B1ANH7 110 aa6.62□□□□□ -1.35
PHGDH-215ENST00000641371 F8WDY8 70 aa6.62□□□□□ -1.35
PHGDH-215ENST00000641371 TAX1BP3O14907 124 aa6.62□□□□□ -1.35
PHGDH-215ENST00000641371 C6orf226Q5I0X4 101 aa6.62□□□□□ -1.35
PHGDH-215ENST00000641371 MEIG1Q5JSS6 88 aa6.62□□□□□ -1.35
PHGDH-215ENST00000641371 CFAP161Q6P656 301 aa6.62□□□□□ -1.35
PHGDH-215ENST00000641371 C5orf38Q86SI9 138 aa6.62□□□□□ -1.35
PHGDH-215ENST00000641371 RMI2Q96E14 147 aa6.62□□□□□ -1.35
PHGDH-215ENST00000641371 NHP2Q9NX24 153 aaKnown RBP6.62□□□□□ -1.35
PHGDH-215ENST00000641371 KLK5Q9Y337 293 aaPredicted RBP6.62□□□□□ -1.35
PHGDH-215ENST00000641371 A0A0B4J2C4 111 aa6.61□□□□□ -1.35
PHGDH-215ENST00000641371 A0A1B0GV90 55 aa6.61□□□□□ -1.35
PHGDH-215ENST00000641371 COX17Q14061 63 aa6.61□□□□□ -1.35
PHGDH-215ENST00000641371 CLPSL2Q6UWE3 100 aa6.61□□□□□ -1.35
PHGDH-215ENST00000641371 WFDC10BQ8IUB3 73 aa6.61□□□□□ -1.35
PHGDH-215ENST00000641371 UBE2WQ96B02 151 aa6.61□□□□□ -1.35
PHGDH-215ENST00000641371 TOMM7Q9P0U1 55 aa6.61□□□□□ -1.35
PHGDH-215ENST00000641371 IGLL5B9A064 214 aa6.6□□□□□ -1.35
PHGDH-215ENST00000641371 IGHV3-33P01772 117 aa6.6□□□□□ -1.35
PHGDH-215ENST00000641371 CKS1BP61024 79 aa6.6□□□□□ -1.35
PHGDH-215ENST00000641371 FOXI1Q12951 378 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms