RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 IFITM10A6NMD0 228 aa15.83■□□□□ 0.12
VEGFA-230ENST00000640482 PRSS47A8MTI9 375 aa15.83■□□□□ 0.12
VEGFA-230ENST00000640482 SPAG11BQ08648 103 aa15.83■□□□□ 0.12
VEGFA-230ENST00000640482 SERTAD4-AS1Q5TG53 156 aa15.83■□□□□ 0.12
VEGFA-230ENST00000640482 OR10D4PQ8NGN7 298 aa15.83■□□□□ 0.12
VEGFA-230ENST00000640482 MAP1LC3AQ9H492 121 aa15.83■□□□□ 0.12
VEGFA-230ENST00000640482 PTTG1IPP53801 180 aa15.82■□□□□ 0.12
VEGFA-230ENST00000640482 GAGE2BQ13066 116 aa15.81■□□□□ 0.12
VEGFA-230ENST00000640482 PYGO1Q9Y3Y4 419 aa15.81■□□□□ 0.12
VEGFA-230ENST00000640482 IGHV3OR16-9A0A0B4J2B5 98 aa15.8■□□□□ 0.12
VEGFA-230ENST00000640482 LOC389332A0A1B0GUA5 103 aa15.8■□□□□ 0.12
VEGFA-230ENST00000640482 PRR3P79522 188 aaKnown RBP15.79■□□□□ 0.12
VEGFA-230ENST00000640482 ORAOV1Q8WV07 137 aa15.79■□□□□ 0.12
VEGFA-230ENST00000640482 F8WDY8 70 aa15.77■□□□□ 0.12
VEGFA-230ENST00000640482 RNF151Q2KHN1 245 aa15.77■□□□□ 0.12
VEGFA-230ENST00000640482 Q8N8P6 123 aa15.77■□□□□ 0.12
VEGFA-230ENST00000640482 IGLV4-3A0A075B6K6 122 aa15.76■□□□□ 0.11
VEGFA-230ENST00000640482 TGIF2-C20orf24A0A0A6YYL0 155 aa15.76■□□□□ 0.11
VEGFA-230ENST00000640482 UQCC3Q6UW78 93 aa15.76■□□□□ 0.11
VEGFA-230ENST00000640482 TMEM141Q96I45 108 aa15.76■□□□□ 0.11
VEGFA-230ENST00000640482 IMMP2LQ96T52 175 aa15.76■□□□□ 0.11
VEGFA-230ENST00000640482 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.75■□□□□ 0.11
VEGFA-230ENST00000640482 RPL18AQ02543 176 aaKnown RBP15.75■□□□□ 0.11
VEGFA-230ENST00000640482 ORMDL2Q53FV1 153 aa15.74■□□□□ 0.11
VEGFA-230ENST00000640482 CTDSP1Q9GZU7 261 aa15.74■□□□□ 0.11
VEGFA-230ENST00000640482 CYSLTR1Q9Y271 337 aa15.74■□□□□ 0.11
VEGFA-230ENST00000640482 TEX43Q6ZNM6 134 aa15.73■□□□□ 0.11
VEGFA-230ENST00000640482 MRPL35Q9NZE8 188 aaKnown RBP15.73■□□□□ 0.11
VEGFA-230ENST00000640482 K7EMI3 77 aa15.72■□□□□ 0.11
VEGFA-230ENST00000640482 NDUFA1O15239 70 aa15.72■□□□□ 0.11
VEGFA-230ENST00000640482 C2orf66Q6UXQ4 117 aa15.72■□□□□ 0.11
VEGFA-230ENST00000640482 C2orf88Q9BSF0 95 aa15.72■□□□□ 0.11
VEGFA-230ENST00000640482 TMEM218A2RU14 115 aa15.71■□□□□ 0.11
VEGFA-230ENST00000640482 ADCYAP1P18509 176 aa15.71■□□□□ 0.11
VEGFA-230ENST00000640482 Q6ZN92 141 aa15.71■□□□□ 0.11
VEGFA-230ENST00000640482 Q6ZRP5 223 aa15.71■□□□□ 0.11
VEGFA-230ENST00000640482 A0A087WZ39 114 aa15.7■□□□□ 0.1
VEGFA-230ENST00000640482 A0A0J9YXV3 536 aa15.7■□□□□ 0.1
VEGFA-230ENST00000640482 LINC00242Q5T6M2 205 aa15.7■□□□□ 0.1
VEGFA-230ENST00000640482 NXT2Q9NPJ8 142 aaKnown RBP15.7■□□□□ 0.1
VEGFA-230ENST00000640482 MT1HL1P0DM35 61 aa15.69■□□□□ 0.1
VEGFA-230ENST00000640482 A0A1W2PNN7 141 aa15.68■□□□□ 0.1
VEGFA-230ENST00000640482 NPSP0C0P6 89 aa15.68■□□□□ 0.1
VEGFA-230ENST00000640482 IFITM2Q01629 132 aa15.68■□□□□ 0.1
VEGFA-230ENST00000640482 TRAV9-1A0A075B6T8 112 aa15.67■□□□□ 0.1
VEGFA-230ENST00000640482 UBE2D1P51668 147 aa15.67■□□□□ 0.1
VEGFA-230ENST00000640482 C9orf116Q5BN46 136 aaPredicted RBP15.67■□□□□ 0.1
VEGFA-230ENST00000640482 VCX2Q9H322 139 aa15.67■□□□□ 0.1
VEGFA-230ENST00000640482 G0S2P27469 103 aa15.66■□□□□ 0.1
VEGFA-230ENST00000640482 SPINK6Q6UWN8 80 aa15.66■□□□□ 0.1
VEGFA-230ENST00000640482 C10orf25Q5T742 122 aa15.65■□□□□ 0.1
VEGFA-230ENST00000640482 UNQ6190/PRO20217Q6UXQ8 127 aa15.65■□□□□ 0.1
VEGFA-230ENST00000640482 AMELXQ99217 191 aa15.65■□□□□ 0.1
VEGFA-230ENST00000640482 LINC01561Q8N1V8 128 aa15.64■□□□□ 0.09
VEGFA-230ENST00000640482 SEC11CQ9BY50 192 aa15.64■□□□□ 0.09
VEGFA-230ENST00000640482 PLA2G2DQ9UNK4 145 aa15.64■□□□□ 0.09
VEGFA-230ENST00000640482 TLX1NBP0CAT3 122 aa15.63■□□□□ 0.09
VEGFA-230ENST00000640482 S100PP25815 95 aa15.63■□□□□ 0.09
VEGFA-230ENST00000640482 KIAA0087Q14695 138 aa15.63■□□□□ 0.09
VEGFA-230ENST00000640482 PAPPA-AS1Q5QFB9 102 aa15.63■□□□□ 0.09
VEGFA-230ENST00000640482 ZC2HC1BQ5TFG8 222 aa15.63■□□□□ 0.09
VEGFA-230ENST00000640482 LINC00173Q6ZV60 143 aa15.63■□□□□ 0.09
VEGFA-230ENST00000640482 C6orf48Q9UBA6 75 aa15.63■□□□□ 0.09
VEGFA-230ENST00000640482 IGIPA6NJ69 53 aa15.62■□□□□ 0.09
VEGFA-230ENST00000640482 KIAA1644Q3SXP7 199 aa15.62■□□□□ 0.09
VEGFA-230ENST00000640482 REG3GQ6UW15 175 aa15.6■□□□□ 0.09
VEGFA-230ENST00000640482 LINC01600Q96MT4 127 aa15.6■□□□□ 0.09
VEGFA-230ENST00000640482 TRBV30A0A0K0K1B3 111 aa15.59■□□□□ 0.09
VEGFA-230ENST00000640482 TIMM17AQ99595 171 aa15.59■□□□□ 0.09
VEGFA-230ENST00000640482 MT-ND6P03923 174 aa15.58■□□□□ 0.08
VEGFA-230ENST00000640482 SRSF9Q13242 221 aaKnown RBP eCLIP15.58■□□□□ 0.08
VEGFA-230ENST00000640482 PHF5AQ7RTV0 110 aaKnown RBP15.58■□□□□ 0.08
VEGFA-230ENST00000640482 FAM19A3Q7Z5A8 133 aa15.58■□□□□ 0.08
VEGFA-230ENST00000640482 COMMD7Q86VX2 200 aa15.58■□□□□ 0.08
VEGFA-230ENST00000640482 TOMM6Q96B49 74 aa15.58■□□□□ 0.08
VEGFA-230ENST00000640482 PACRGQ96M98 296 aaPredicted RBP15.58■□□□□ 0.08
VEGFA-230ENST00000640482 GNB1LQ9BYB4 327 aa15.58■□□□□ 0.08
VEGFA-230ENST00000640482 SEC11AP67812 179 aa15.57■□□□□ 0.08
VEGFA-230ENST00000640482 PSORS1C2Q9UIG4 136 aa15.57■□□□□ 0.08
VEGFA-230ENST00000640482 HMCN2Q8NDA2 5059 aa15.57■□□□□ 0.08
VEGFA-230ENST00000640482 PRSS2P07478 247 aa15.56■□□□□ 0.08
VEGFA-230ENST00000640482 GAGE2EQ4V326 116 aa15.56■□□□□ 0.08
VEGFA-230ENST00000640482 C2orf82Q6UX34 121 aa15.56■□□□□ 0.08
VEGFA-230ENST00000640482 GAGE2DQ9UEU5 116 aa15.56■□□□□ 0.08
VEGFA-230ENST00000640482 HERVK_113P63121 156 aa15.55■□□□□ 0.08
VEGFA-230ENST00000640482 COX19Q49B96 90 aa15.55■□□□□ 0.08
VEGFA-230ENST00000640482 FAM168BA1KXE4 195 aa15.53■□□□□ 0.08
VEGFA-230ENST00000640482 ERASQ7Z444 233 aa15.53■□□□□ 0.08
VEGFA-230ENST00000640482 SCGB3A1Q96QR1 104 aa15.53■□□□□ 0.08
VEGFA-230ENST00000640482 GEMIN7Q9H840 131 aaKnown RBP15.53■□□□□ 0.08
VEGFA-230ENST00000640482 TOMM7Q9P0U1 55 aa15.53■□□□□ 0.08
VEGFA-230ENST00000640482 TNXBP22105 4242 aa15.53■□□□□ 0.08
VEGFA-230ENST00000640482 LINC01549A6NIU2 74 aa15.52■□□□□ 0.08
VEGFA-230ENST00000640482 NDUFC2-KCTD14E9PQ53 114 aa15.52■□□□□ 0.08
VEGFA-230ENST00000640482 CKS1BP61024 79 aa15.52■□□□□ 0.08
VEGFA-230ENST00000640482 C1orf137Q5JT78 98 aa15.52■□□□□ 0.08
VEGFA-230ENST00000640482 FAM19A5Q7Z5A7 132 aaPredicted RBP15.52■□□□□ 0.08
VEGFA-230ENST00000640482 ALKBH7Q9BT30 221 aaPredicted RBP15.52■□□□□ 0.08
VEGFA-230ENST00000640482 C6orf226Q5I0X4 101 aa15.51■□□□□ 0.07
VEGFA-230ENST00000640482 Q8IZM0 81 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms