RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 ORMDL3Q8N138 153 aa10.16□□□□□ -0.78
COLCA2-207ENST00000639470 TMEM18Q96B42 140 aa10.16□□□□□ -0.78
COLCA2-207ENST00000639470 IGHV3OR16-9A0A0B4J2B5 98 aa10.15□□□□□ -0.78
COLCA2-207ENST00000639470 LOC107984640A0A0U1RRK4 108 aa10.15□□□□□ -0.78
COLCA2-207ENST00000639470 RPL18AQ02543 176 aaKnown RBP10.15□□□□□ -0.78
COLCA2-207ENST00000639470 COMMD7Q86VX2 200 aa10.15□□□□□ -0.78
COLCA2-207ENST00000639470 ORAOV1Q8WV07 137 aa10.15□□□□□ -0.78
COLCA2-207ENST00000639470 SPANXA1Q9NS26 97 aa10.15□□□□□ -0.78
COLCA2-207ENST00000639470 IGLV4-3A0A075B6K6 122 aa10.14□□□□□ -0.79
COLCA2-207ENST00000639470 APOMO95445 188 aa10.14□□□□□ -0.79
COLCA2-207ENST00000639470 S100A8P05109 93 aa10.14□□□□□ -0.79
COLCA2-207ENST00000639470 PPBPP02775 128 aa10.13□□□□□ -0.79
COLCA2-207ENST00000639470 MRPS36P82909 103 aaKnown RBP10.13□□□□□ -0.79
COLCA2-207ENST00000639470 SMAGPQ0VAQ4 97 aa10.13□□□□□ -0.79
COLCA2-207ENST00000639470 C9orf116Q5BN46 136 aaPredicted RBP10.13□□□□□ -0.79
COLCA2-207ENST00000639470 ATP5L2Q7Z4Y8 100 aa10.13□□□□□ -0.79
COLCA2-207ENST00000639470 LINC00474Q9P2X8 69 aa10.13□□□□□ -0.79
COLCA2-207ENST00000639470 UNQ6190/PRO20217Q6UXQ8 127 aa10.12□□□□□ -0.79
COLCA2-207ENST00000639470 PHF5AQ7RTV0 110 aaKnown RBP10.12□□□□□ -0.79
COLCA2-207ENST00000639470 C2orf48Q96LS8 159 aa10.12□□□□□ -0.79
COLCA2-207ENST00000639470 FAM168BA1KXE4 195 aa10.11□□□□□ -0.79
COLCA2-207ENST00000639470 ADCYAP1P18509 176 aa10.11□□□□□ -0.79
COLCA2-207ENST00000639470 KRTAP11-1Q8IUC1 163 aa10.11□□□□□ -0.79
COLCA2-207ENST00000639470 RAB5AP20339 215 aa10.1□□□□□ -0.79
COLCA2-207ENST00000639470 PNRC1Q12796 327 aaPredicted RBP10.1□□□□□ -0.79
COLCA2-207ENST00000639470 LINC00242Q5T6M2 205 aa10.1□□□□□ -0.79
COLCA2-207ENST00000639470 LINC00173Q6ZV60 143 aa10.1□□□□□ -0.79
COLCA2-207ENST00000639470 C6orf48Q9UBA6 75 aa10.1□□□□□ -0.79
COLCA2-207ENST00000639470 TMEM218A2RU14 115 aa10.09□□□□□ -0.79
COLCA2-207ENST00000639470 SRSF9Q13242 221 aaKnown RBP eCLIP10.09□□□□□ -0.79
COLCA2-207ENST00000639470 C2orf82Q6UX34 121 aa10.09□□□□□ -0.79
COLCA2-207ENST00000639470 OR10D4PQ8NGN7 298 aa10.09□□□□□ -0.79
COLCA2-207ENST00000639470 MT-ND4LP03901 98 aa10.08□□□□□ -0.8
COLCA2-207ENST00000639470 IFI27P40305 119 aaPredicted RBP10.08□□□□□ -0.8
COLCA2-207ENST00000639470 KIAA0087Q14695 138 aa10.08□□□□□ -0.8
COLCA2-207ENST00000639470 KIAA1644Q3SXP7 199 aa10.08□□□□□ -0.8
COLCA2-207ENST00000639470 Q6ZRP5 223 aa10.08□□□□□ -0.8
COLCA2-207ENST00000639470 KRTAP7-1Q8IUC3 87 aa10.08□□□□□ -0.8
COLCA2-207ENST00000639470 LINC01600Q96MT4 127 aa10.08□□□□□ -0.8
COLCA2-207ENST00000639470 MAP1LC3AQ9H492 121 aa10.08□□□□□ -0.8
COLCA2-207ENST00000639470 PRSS47A8MTI9 375 aa10.07□□□□□ -0.8
COLCA2-207ENST00000639470 ANAPC16Q96DE5 110 aa10.07□□□□□ -0.8
COLCA2-207ENST00000639470 MRPL35Q9NZE8 188 aaKnown RBP10.07□□□□□ -0.8
COLCA2-207ENST00000639470 PSORS1C2Q9UIG4 136 aa10.07□□□□□ -0.8
COLCA2-207ENST00000639470 PKIGQ9Y2B9 76 aa10.07□□□□□ -0.8
COLCA2-207ENST00000639470 UBE2D1P51668 147 aa10.06□□□□□ -0.8
COLCA2-207ENST00000639470 C2orf66Q6UXQ4 117 aa10.06□□□□□ -0.8
COLCA2-207ENST00000639470 Q8N8P6 123 aa10.06□□□□□ -0.8
COLCA2-207ENST00000639470 TMEM141Q96I45 108 aa10.06□□□□□ -0.8
COLCA2-207ENST00000639470 SEC11CQ9BY50 192 aa10.06□□□□□ -0.8
COLCA2-207ENST00000639470 PYGO1Q9Y3Y4 419 aa10.06□□□□□ -0.8
COLCA2-207ENST00000639470 A0A087WZ39 114 aa10.05□□□□□ -0.8
COLCA2-207ENST00000639470 TGIF2-C20orf24A0A0A6YYL0 155 aa10.05□□□□□ -0.8
COLCA2-207ENST00000639470 NDUFA1O15239 70 aa10.05□□□□□ -0.8
COLCA2-207ENST00000639470 GAGE2EQ4V326 116 aa10.05□□□□□ -0.8
COLCA2-207ENST00000639470 LCE2DQ5TA82 110 aaPredicted RBP10.05□□□□□ -0.8
COLCA2-207ENST00000639470 SPINK6Q6UWN8 80 aa10.05□□□□□ -0.8
COLCA2-207ENST00000639470 GAGE2DQ9UEU5 116 aa10.05□□□□□ -0.8
COLCA2-207ENST00000639470 RNF151Q2KHN1 245 aa10.04□□□□□ -0.8
COLCA2-207ENST00000639470 FAM19A5Q7Z5A7 132 aaPredicted RBP10.04□□□□□ -0.8
COLCA2-207ENST00000639470 CYSLTR1Q9Y271 337 aa10.04□□□□□ -0.8
COLCA2-207ENST00000639470 TNXBP22105 4242 aa10.03□□□□□ -0.8
COLCA2-207ENST00000639470 KRTAP10-8P60410 259 aa10.03□□□□□ -0.8
COLCA2-207ENST00000639470 TEX43Q6ZNM6 134 aa10.03□□□□□ -0.8
COLCA2-207ENST00000639470 IMMP2LQ96T52 175 aa10.03□□□□□ -0.8
COLCA2-207ENST00000639470 LAMTOR2Q9Y2Q5 125 aa10.03□□□□□ -0.8
COLCA2-207ENST00000639470 IGIPA6NJ69 53 aa10.02□□□□□ -0.81
COLCA2-207ENST00000639470 MT-ND6P03923 174 aa10.02□□□□□ -0.81
COLCA2-207ENST00000639470 C1orf137Q5JT78 98 aa10.02□□□□□ -0.81
COLCA2-207ENST00000639470 C10orf91Q5T1B1 145 aa10.02□□□□□ -0.81
COLCA2-207ENST00000639470 AMELXQ99217 191 aa10.02□□□□□ -0.81
COLCA2-207ENST00000639470 CTDSP1Q9GZU7 261 aa10.02□□□□□ -0.81
COLCA2-207ENST00000639470 CARHSP1Q9Y2V2 147 aaKnown RBP10.02□□□□□ -0.81
COLCA2-207ENST00000639470 UBR4Q5T4S7 5183 aa10□□□□□ -0.81
COLCA2-207ENST00000639470 C9orf129Q5T035 196 aaKnown RBP10□□□□□ -0.81
COLCA2-207ENST00000639470 TOMM7Q9P0U1 55 aa10□□□□□ -0.81
COLCA2-207ENST00000639470 TLX1NBP0CAT3 122 aa9.99□□□□□ -0.81
COLCA2-207ENST00000639470 VCX2Q9H322 139 aa9.99□□□□□ -0.81
COLCA2-207ENST00000639470 ORMDL2Q53FV1 153 aa9.98□□□□□ -0.81
COLCA2-207ENST00000639470 REG3GQ6UW15 175 aa9.98□□□□□ -0.81
COLCA2-207ENST00000639470 LINC00469Q8N7U9 141 aa9.98□□□□□ -0.81
COLCA2-207ENST00000639470 C2orf88Q9BSF0 95 aa9.98□□□□□ -0.81
COLCA2-207ENST00000639470 NDUFA5Q16718 116 aa9.97□□□□□ -0.81
COLCA2-207ENST00000639470 Q6ZN92 141 aa9.97□□□□□ -0.81
COLCA2-207ENST00000639470 NXT2Q9NPJ8 142 aaKnown RBP9.97□□□□□ -0.81
COLCA2-207ENST00000639470 CDKN2A-AS1Q9UH64 79 aa9.97□□□□□ -0.81
COLCA2-207ENST00000639470 F8WDY8 70 aa9.96□□□□□ -0.82
COLCA2-207ENST00000639470 RHEBQ15382 184 aa9.96□□□□□ -0.82
COLCA2-207ENST00000639470 M0QXV9 152 aa9.95□□□□□ -0.82
COLCA2-207ENST00000639470 IGLV7-43P04211 117 aa9.95□□□□□ -0.82
COLCA2-207ENST00000639470 TOMM6Q96B49 74 aa9.95□□□□□ -0.82
COLCA2-207ENST00000639470 TRBV30A0A0K0K1B3 111 aa9.94□□□□□ -0.82
COLCA2-207ENST00000639470 NDUFC2-KCTD14E9PQ53 114 aa9.94□□□□□ -0.82
COLCA2-207ENST00000639470 SLC7A5P1Q8MH63 180 aa9.94□□□□□ -0.82
COLCA2-207ENST00000639470 SVBPQ8N300 66 aa9.94□□□□□ -0.82
COLCA2-207ENST00000639470 APOC3P02656 99 aa9.93□□□□□ -0.82
COLCA2-207ENST00000639470 FAM19A3Q7Z5A8 133 aa9.93□□□□□ -0.82
COLCA2-207ENST00000639470 PRR26Q8N8Z3 221 aa9.93□□□□□ -0.82
COLCA2-207ENST00000639470 PACRGQ96M98 296 aaPredicted RBP9.93□□□□□ -0.82
COLCA2-207ENST00000639470 ALKBH7Q9BT30 221 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms