RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 ANKRD29Q8N6D5 301 aa7.52□□□□□ -1.21
NECAP1-216ENST00000639167 CDC42SE2Q9NRR3 84 aa7.52□□□□□ -1.21
NECAP1-216ENST00000639167 TRGV4A0A0C4DH28 118 aa7.52□□□□□ -1.21
NECAP1-216ENST00000639167 SMIM1B2RUZ4 78 aa7.52□□□□□ -1.21
NECAP1-216ENST00000639167 UBE2L6O14933 153 aa7.52□□□□□ -1.21
NECAP1-216ENST00000639167 KRTAP10-3P60369 221 aa7.52□□□□□ -1.21
NECAP1-216ENST00000639167 SETXQ7Z333 2677 aaKnown RBP7.51□□□□□ -1.21
NECAP1-216ENST00000639167 CKS1BP61024 79 aa7.51□□□□□ -1.21
NECAP1-216ENST00000639167 TMEM243Q9BU79 118 aa7.51□□□□□ -1.21
NECAP1-216ENST00000639167 IGLV5-39A0A0G2JS06 123 aa7.5□□□□□ -1.21
NECAP1-216ENST00000639167 C4orf48Q5BLP8 95 aa7.5□□□□□ -1.21
NECAP1-216ENST00000639167 PPDPFLQ8WWR9 84 aa7.5□□□□□ -1.21
NECAP1-216ENST00000639167 ICOSQ9Y6W8 199 aa7.5□□□□□ -1.21
NECAP1-216ENST00000639167 IGKV3OR2-268A0A0C4DH90 116 aa7.5□□□□□ -1.21
NECAP1-216ENST00000639167 TRBV30A0A0K0K1B3 111 aa7.5□□□□□ -1.21
NECAP1-216ENST00000639167 TIMM17BO60830 172 aa7.5□□□□□ -1.21
NECAP1-216ENST00000639167 GAGE6Q13070 117 aa7.5□□□□□ -1.21
NECAP1-216ENST00000639167 ATXN8Q156A1 80 aa7.5□□□□□ -1.21
NECAP1-216ENST00000639167 C6orf226Q5I0X4 101 aa7.5□□□□□ -1.21
NECAP1-216ENST00000639167 NIPBLQ6KC79 2804 aaeCLIP7.49□□□□□ -1.21
NECAP1-216ENST00000639167 LINC01620Q4KN68 170 aa7.49□□□□□ -1.21
NECAP1-216ENST00000639167 FAM19A3Q7Z5A8 133 aa7.49□□□□□ -1.21
NECAP1-216ENST00000639167 OVOL2Q9BRP0 275 aa7.49□□□□□ -1.21
NECAP1-216ENST00000639167 TRBV6-4A0A1B0GX49 114 aa7.49□□□□□ -1.21
NECAP1-216ENST00000639167 F5H768 121 aa7.49□□□□□ -1.21
NECAP1-216ENST00000639167 RPL13AP40429 203 aaKnown RBP7.49□□□□□ -1.21
NECAP1-216ENST00000639167 CIRBPQ14011 172 aaKnown RBP7.49□□□□□ -1.21
NECAP1-216ENST00000639167 FHL2Q14192 279 aa7.49□□□□□ -1.21
NECAP1-216ENST00000639167 LINC00308Q8TCZ7 52 aa7.49□□□□□ -1.21
NECAP1-216ENST00000639167 DEFB130BP0DP73 79 aa7.48□□□□□ -1.21
NECAP1-216ENST00000639167 DEFB130AP0DP74 79 aa7.48□□□□□ -1.21
NECAP1-216ENST00000639167 IFITM1P13164 125 aa7.48□□□□□ -1.21
NECAP1-216ENST00000639167 MEIG1Q5JSS6 88 aa7.48□□□□□ -1.21
NECAP1-216ENST00000639167 PRIMA1Q86XR5 153 aa7.48□□□□□ -1.21
NECAP1-216ENST00000639167 SMIM20Q8N5G0 67 aa7.48□□□□□ -1.21
NECAP1-216ENST00000639167 CLEC2BQ92478 149 aa7.48□□□□□ -1.21
NECAP1-216ENST00000639167 CDIP1Q9H305 208 aa7.48□□□□□ -1.21
NECAP1-216ENST00000639167 ITPR2Q14571 2701 aa7.48□□□□□ -1.21
NECAP1-216ENST00000639167 SOSTDC1Q6X4U4 206 aa7.47□□□□□ -1.21
NECAP1-216ENST00000639167 HIVEP2P31629 2446 aa7.46□□□□□ -1.21
NECAP1-216ENST00000639167 IGLV4-60A0A075B6I1 120 aa7.46□□□□□ -1.21
NECAP1-216ENST00000639167 CRLF1O75462 422 aa7.46□□□□□ -1.21
NECAP1-216ENST00000639167 SPATA3Q8NHX4 192 aa7.46□□□□□ -1.21
NECAP1-216ENST00000639167 SS18L2Q9UHA2 77 aa7.46□□□□□ -1.21
NECAP1-216ENST00000639167 NTN5Q8WTR8 489 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-216ENST00000639167 CHCHD5Q9BSY4 110 aa7.46□□□□□ -1.22
NECAP1-216ENST00000639167 FASNP49327 2511 aaKnown RBP7.45□□□□□ -1.22
NECAP1-216ENST00000639167 TRBV6-8A0A0A6YYG3 113 aa7.45□□□□□ -1.22
NECAP1-216ENST00000639167 LY6G6DO95868 133 aa7.45□□□□□ -1.22
NECAP1-216ENST00000639167 COX6CP09669 75 aa7.45□□□□□ -1.22
NECAP1-216ENST00000639167 LINC00482Q8N8I6 264 aa7.45□□□□□ -1.22
NECAP1-216ENST00000639167 RNF183Q96D59 192 aa7.45□□□□□ -1.22
NECAP1-216ENST00000639167 TOMM7Q9P0U1 55 aa7.45□□□□□ -1.22
NECAP1-216ENST00000639167 FN1P02751 2386 aaKnown RBP7.45□□□□□ -1.22
NECAP1-216ENST00000639167 TRBV10-2A0A0K0K1G8 114 aa7.44□□□□□ -1.22
NECAP1-216ENST00000639167 SMIM9A6NGZ8 99 aa7.44□□□□□ -1.22
NECAP1-216ENST00000639167 MT-ATP8P03928 68 aa7.44□□□□□ -1.22
NECAP1-216ENST00000639167 HELZ2Q9BYK8 2649 aaKnown RBP7.43□□□□□ -1.22
NECAP1-216ENST00000639167 TEX49A0A1B0GTD5 131 aa7.43□□□□□ -1.22
NECAP1-216ENST00000639167 H7C423 109 aa7.43□□□□□ -1.22
NECAP1-216ENST00000639167 XGP55808 180 aa7.43□□□□□ -1.22
NECAP1-216ENST00000639167 UNC79Q9P2D8 2635 aa7.43□□□□□ -1.22
NECAP1-216ENST00000639167 C2orf82Q6UX34 121 aa7.43□□□□□ -1.22
NECAP1-216ENST00000639167 LST1O00453 97 aa7.42□□□□□ -1.22
NECAP1-216ENST00000639167 COX7B2Q8TF08 81 aa7.42□□□□□ -1.22
NECAP1-216ENST00000639167 A0A096LPF7 62 aa7.42□□□□□ -1.22
NECAP1-216ENST00000639167 GYPEP15421 78 aa7.42□□□□□ -1.22
NECAP1-216ENST00000639167 X6R8D5 127 aa7.42□□□□□ -1.22
NECAP1-216ENST00000639167 MALP21145 153 aa7.41□□□□□ -1.22
NECAP1-216ENST00000639167 C5orf38Q86SI9 138 aa7.41□□□□□ -1.22
NECAP1-216ENST00000639167 KIR2DL5BQ8NHK3 375 aa7.41□□□□□ -1.22
NECAP1-216ENST00000639167 INAFM1C9JVW0 142 aa7.4□□□□□ -1.22
NECAP1-216ENST00000639167 DEFB4AO15263 64 aa7.4□□□□□ -1.22
NECAP1-216ENST00000639167 UBE2WQ96B02 151 aa7.4□□□□□ -1.22
NECAP1-216ENST00000639167 V9GYY9 64 aa7.4□□□□□ -1.22
NECAP1-216ENST00000639167 TMEM262E9PQX1 116 aa7.4□□□□□ -1.23
NECAP1-216ENST00000639167 MIR7-3HGQ8N6C7 128 aa7.4□□□□□ -1.23
NECAP1-216ENST00000639167 IGHV3OR16-9A0A0B4J2B5 98 aa7.39□□□□□ -1.23
NECAP1-216ENST00000639167 LINC00612Q8N6U2 182 aa7.39□□□□□ -1.23
NECAP1-216ENST00000639167 COPS9Q8WXC6 57 aa7.39□□□□□ -1.23
NECAP1-216ENST00000639167 CLPSL2Q6UWE3 100 aa7.39□□□□□ -1.23
NECAP1-216ENST00000639167 C11orf68Q9H3H3 251 aaKnown RBP7.39□□□□□ -1.23
NECAP1-216ENST00000639167 LINC00959A0A1B0GUT2 108 aa7.38□□□□□ -1.23
NECAP1-216ENST00000639167 H3BT86 120 aa7.38□□□□□ -1.23
NECAP1-216ENST00000639167 DEFB135Q30KP9 77 aa7.38□□□□□ -1.23
NECAP1-216ENST00000639167 FAM222AQ5U5X8 452 aa7.38□□□□□ -1.23
NECAP1-216ENST00000639167 LINC01600Q96MT4 127 aa7.38□□□□□ -1.23
NECAP1-216ENST00000639167 COX7A2LO14548 114 aa7.37□□□□□ -1.23
NECAP1-216ENST00000639167 LINC00158P58513 81 aa7.37□□□□□ -1.23
NECAP1-216ENST00000639167 A0A087WZ39 114 aa7.37□□□□□ -1.23
NECAP1-216ENST00000639167 TRAV8-4A0A0B4J246 113 aa7.37□□□□□ -1.23
NECAP1-216ENST00000639167 XCL1P47992 114 aa7.37□□□□□ -1.23
NECAP1-216ENST00000639167 C9orf66Q5T8R8 295 aa7.37□□□□□ -1.23
NECAP1-216ENST00000639167 PRO0255Q9UI72 69 aa7.37□□□□□ -1.23
NECAP1-216ENST00000639167 NOTCH2Q04721 2471 aa7.37□□□□□ -1.23
NECAP1-216ENST00000639167 PFN2P35080 140 aa7.36□□□□□ -1.23
NECAP1-216ENST00000639167 KMT2BQ9UMN6 2715 aaPredicted RBP7.36□□□□□ -1.23
NECAP1-216ENST00000639167 HECTD1Q9ULT8 2610 aa7.36□□□□□ -1.23
NECAP1-216ENST00000639167 PAX4O43316 350 aa7.36□□□□□ -1.23
NECAP1-216ENST00000639167 LINC00337Q8N6G1 96 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms