RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 A0A1B0GW15 77 aa10.34□□□□□ -0.75
SMN2-216ENST00000638794 D6R8Y8 96 aa10.34□□□□□ -0.75
SMN2-216ENST00000638794 TCAPO15273 167 aa10.34□□□□□ -0.75
SMN2-216ENST00000638794 RNF151Q2KHN1 245 aa10.34□□□□□ -0.75
SMN2-216ENST00000638794 ORAOV1Q8WV07 137 aa10.34□□□□□ -0.75
SMN2-216ENST00000638794 IGHV3OR16-9A0A0B4J2B5 98 aa10.33□□□□□ -0.76
SMN2-216ENST00000638794 SRSF3P84103 164 aaKnown RBP10.33□□□□□ -0.76
SMN2-216ENST00000638794 MRPL54Q6P161 138 aaKnown RBP10.33□□□□□ -0.76
SMN2-216ENST00000638794 SPANXA1Q9NS26 97 aa10.33□□□□□ -0.76
SMN2-216ENST00000638794 MRPL35Q9NZE8 188 aaKnown RBP10.33□□□□□ -0.76
SMN2-216ENST00000638794 NPYP01303 97 aa10.32□□□□□ -0.76
SMN2-216ENST00000638794 C1orf137Q5JT78 98 aa10.32□□□□□ -0.76
SMN2-216ENST00000638794 IFITM10A6NMD0 228 aa10.31□□□□□ -0.76
SMN2-216ENST00000638794 HBBP68871 147 aa10.31□□□□□ -0.76
SMN2-216ENST00000638794 MRPS36P82909 103 aaKnown RBP10.31□□□□□ -0.76
SMN2-216ENST00000638794 C10orf25Q5T742 122 aa10.31□□□□□ -0.76
SMN2-216ENST00000638794 LPAP08519 4548 aa10.31□□□□□ -0.76
SMN2-216ENST00000638794 A0A1B0GXF2 115 aa10.3□□□□□ -0.76
SMN2-216ENST00000638794 F8W036 122 aa10.3□□□□□ -0.76
SMN2-216ENST00000638794 F8WDY8 70 aa10.3□□□□□ -0.76
SMN2-216ENST00000638794 NDUFA1O15239 70 aa10.3□□□□□ -0.76
SMN2-216ENST00000638794 S100A8P05109 93 aa10.3□□□□□ -0.76
SMN2-216ENST00000638794 IMMP2LQ96T52 175 aa10.3□□□□□ -0.76
SMN2-216ENST00000638794 FAM168BA1KXE4 195 aa10.29□□□□□ -0.76
SMN2-216ENST00000638794 PEA15Q15121 130 aa10.29□□□□□ -0.76
SMN2-216ENST00000638794 UNQ6190/PRO20217Q6UXQ8 127 aa10.28□□□□□ -0.76
SMN2-216ENST00000638794 C6orf48Q9UBA6 75 aa10.28□□□□□ -0.76
SMN2-216ENST00000638794 PPBPP02775 128 aa10.27□□□□□ -0.77
SMN2-216ENST00000638794 TLX1NBP0CAT3 122 aa10.27□□□□□ -0.77
SMN2-216ENST00000638794 SMDT1Q9H4I9 107 aa10.27□□□□□ -0.77
SMN2-216ENST00000638794 TGIF2-C20orf24A0A0A6YYL0 155 aa10.26□□□□□ -0.77
SMN2-216ENST00000638794 A0A1B0GVG6 124 aa10.26□□□□□ -0.77
SMN2-216ENST00000638794 IGLV7-43P04211 117 aa10.26□□□□□ -0.77
SMN2-216ENST00000638794 IFI27P40305 119 aaPredicted RBP10.26□□□□□ -0.77
SMN2-216ENST00000638794 KRTAP11-1Q8IUC1 163 aa10.26□□□□□ -0.77
SMN2-216ENST00000638794 ORMDL3Q8N138 153 aa10.26□□□□□ -0.77
SMN2-216ENST00000638794 A0A087WZ39 114 aa10.25□□□□□ -0.77
SMN2-216ENST00000638794 KIAA0087Q14695 138 aa10.25□□□□□ -0.77
SMN2-216ENST00000638794 GAGE2EQ4V326 116 aa10.25□□□□□ -0.77
SMN2-216ENST00000638794 FAM19A5Q7Z5A7 132 aaPredicted RBP10.25□□□□□ -0.77
SMN2-216ENST00000638794 GAGE2DQ9UEU5 116 aa10.25□□□□□ -0.77
SMN2-216ENST00000638794 IGLV4-3A0A075B6K6 122 aa10.24□□□□□ -0.77
SMN2-216ENST00000638794 RAB5AP20339 215 aa10.24□□□□□ -0.77
SMN2-216ENST00000638794 LINC00242Q5T6M2 205 aa10.24□□□□□ -0.77
SMN2-216ENST00000638794 TMEM136Q6ZRR5 245 aa10.24□□□□□ -0.77
SMN2-216ENST00000638794 DIRC1Q969H9 104 aa10.24□□□□□ -0.77
SMN2-216ENST00000638794 PRELID3AQ96N28 172 aa10.24□□□□□ -0.77
SMN2-216ENST00000638794 PYGO1Q9Y3Y4 419 aa10.24□□□□□ -0.77
SMN2-216ENST00000638794 ATP5L2Q7Z4Y8 100 aa10.23□□□□□ -0.77
SMN2-216ENST00000638794 KRTAP7-1Q8IUC3 87 aa10.23□□□□□ -0.77
SMN2-216ENST00000638794 PRR26Q8N8Z3 221 aa10.23□□□□□ -0.77
SMN2-216ENST00000638794 H0Y9J4 135 aa10.21□□□□□ -0.77
SMN2-216ENST00000638794 C2orf82Q6UX34 121 aa10.21□□□□□ -0.77
SMN2-216ENST00000638794 TMEM141Q96I45 108 aa10.21□□□□□ -0.77
SMN2-216ENST00000638794 TRBV30A0A0K0K1B3 111 aa10.2□□□□□ -0.78
SMN2-216ENST00000638794 LOC389332A0A1B0GUA5 103 aa10.2□□□□□ -0.78
SMN2-216ENST00000638794 M0QXV9 152 aa10.2□□□□□ -0.78
SMN2-216ENST00000638794 PRSS47A8MTI9 375 aa10.19□□□□□ -0.78
SMN2-216ENST00000638794 UBE2D1P51668 147 aa10.19□□□□□ -0.78
SMN2-216ENST00000638794 TEX43Q6ZNM6 134 aa10.19□□□□□ -0.78
SMN2-216ENST00000638794 NDUFC2-KCTD14E9PQ53 114 aa10.18□□□□□ -0.78
SMN2-216ENST00000638794 UBE2BP63146 152 aa10.18□□□□□ -0.78
SMN2-216ENST00000638794 C9orf129Q5T035 196 aaKnown RBP10.18□□□□□ -0.78
SMN2-216ENST00000638794 ZC2HC1BQ5TFG8 222 aa10.18□□□□□ -0.78
SMN2-216ENST00000638794 MAP1LC3AQ9H492 121 aa10.18□□□□□ -0.78
SMN2-216ENST00000638794 LAMTOR2Q9Y2Q5 125 aa10.18□□□□□ -0.78
SMN2-216ENST00000638794 LINC00173Q6ZV60 143 aa10.17□□□□□ -0.78
SMN2-216ENST00000638794 PACRGQ96M98 296 aaPredicted RBP10.17□□□□□ -0.78
SMN2-216ENST00000638794 C2orf88Q9BSF0 95 aa10.17□□□□□ -0.78
SMN2-216ENST00000638794 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
SMN2-216ENST00000638794 C2orf66Q6UXQ4 117 aa10.16□□□□□ -0.78
SMN2-216ENST00000638794 LINC01561Q8N1V8 128 aa10.16□□□□□ -0.78
SMN2-216ENST00000638794 CYSLTR1Q9Y271 337 aa10.16□□□□□ -0.78
SMN2-216ENST00000638794 Q6ZN92 141 aa10.15□□□□□ -0.78
SMN2-216ENST00000638794 Q8N8P6 123 aa10.15□□□□□ -0.78
SMN2-216ENST00000638794 AMELXQ99217 191 aa10.15□□□□□ -0.78
SMN2-216ENST00000638794 IGLV1-50A0A075B6I6 118 aa10.14□□□□□ -0.79
SMN2-216ENST00000638794 VCX2Q9H322 139 aa10.13□□□□□ -0.79
SMN2-216ENST00000638794 TOMM7Q9P0U1 55 aa10.13□□□□□ -0.79
SMN2-216ENST00000638794 PRSS2P07478 247 aa10.12□□□□□ -0.79
SMN2-216ENST00000638794 ORMDL2Q53FV1 153 aa10.12□□□□□ -0.79
SMN2-216ENST00000638794 IGIPA6NJ69 53 aa10.11□□□□□ -0.79
SMN2-216ENST00000638794 NPSP0C0P6 89 aa10.11□□□□□ -0.79
SMN2-216ENST00000638794 CKS1BP61024 79 aa10.11□□□□□ -0.79
SMN2-216ENST00000638794 PNRC1Q12796 327 aaPredicted RBP10.11□□□□□ -0.79
SMN2-216ENST00000638794 LINC00469Q8N7U9 141 aa10.11□□□□□ -0.79
SMN2-216ENST00000638794 ANAPC16Q96DE5 110 aa10.11□□□□□ -0.79
SMN2-216ENST00000638794 MT-ND4LP03901 98 aa10.1□□□□□ -0.79
SMN2-216ENST00000638794 C6orf226Q5I0X4 101 aa10.1□□□□□ -0.79
SMN2-216ENST00000638794 FAM19A3Q7Z5A8 133 aa10.1□□□□□ -0.79
SMN2-216ENST00000638794 Q8IZM0 81 aa10.1□□□□□ -0.79
SMN2-216ENST00000638794 K7EMI3 77 aa10.09□□□□□ -0.79
SMN2-216ENST00000638794 ALKBH7Q9BT30 221 aaPredicted RBP10.09□□□□□ -0.79
SMN2-216ENST00000638794 XAGE1AQ9HD64 81 aa10.09□□□□□ -0.79
SMN2-216ENST00000638794 NXT2Q9NPJ8 142 aaKnown RBP10.08□□□□□ -0.8
SMN2-216ENST00000638794 CDKN2A-AS1Q9UH64 79 aa10.08□□□□□ -0.8
SMN2-216ENST00000638794 C22orf24Q9Y442 160 aa10.08□□□□□ -0.8
SMN2-216ENST00000638794 ZNF861PO60384 105 aa10.07□□□□□ -0.8
SMN2-216ENST00000638794 RPL13AP40429 203 aaKnown RBP10.07□□□□□ -0.8
SMN2-216ENST00000638794 HERVK_113P63121 156 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms