RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.98□□□□□ -0.17
SCN1B-206ENST00000638536 LINC01546A6NGU7 62 aa13.97□□□□□ -0.17
SCN1B-206ENST00000638536 CHAC1Q9BUX1 264 aa13.97□□□□□ -0.17
SCN1B-206ENST00000638536 IGHV3OR16-9A0A0B4J2B5 98 aa13.97□□□□□ -0.17
SCN1B-206ENST00000638536 CIRBP-AS1Q8TBR5 109 aa13.97□□□□□ -0.17
SCN1B-206ENST00000638536 COX6A2Q02221 97 aa13.96□□□□□ -0.17
SCN1B-206ENST00000638536 TOMM6Q96B49 74 aa13.96□□□□□ -0.17
SCN1B-206ENST00000638536 URB1-AS1Q96HZ7 61 aa13.96□□□□□ -0.17
SCN1B-206ENST00000638536 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.95□□□□□ -0.18
SCN1B-206ENST00000638536 MALP21145 153 aa13.95□□□□□ -0.18
SCN1B-206ENST00000638536 LINC00242Q5T6M2 205 aa13.95□□□□□ -0.18
SCN1B-206ENST00000638536 AMELXQ99217 191 aa13.95□□□□□ -0.18
SCN1B-206ENST00000638536 Q5VSD8 79 aa13.94□□□□□ -0.18
SCN1B-206ENST00000638536 C18orf32Q8TCD1 76 aa13.94□□□□□ -0.18
SCN1B-206ENST00000638536 IGHV3-64A0A075B6Q5 118 aa13.93□□□□□ -0.18
SCN1B-206ENST00000638536 EPM2AB3EWF7 344 aa13.93□□□□□ -0.18
SCN1B-206ENST00000638536 TEX43Q6ZNM6 134 aa13.93□□□□□ -0.18
SCN1B-206ENST00000638536 IGLV4-69A0A075B6H9 119 aa13.93□□□□□ -0.18
SCN1B-206ENST00000638536 CHTF8P0CG12 524 aa13.93□□□□□ -0.18
SCN1B-206ENST00000638536 UBE2D1P51668 147 aa13.93□□□□□ -0.18
SCN1B-206ENST00000638536 VCX2Q9H322 139 aa13.92□□□□□ -0.18
SCN1B-206ENST00000638536 ZNF561-AS1K7EIQ3 104 aa13.91□□□□□ -0.18
SCN1B-206ENST00000638536 FA2HQ7L5A8 372 aa13.91□□□□□ -0.18
SCN1B-206ENST00000638536 SMCO4Q9NRQ5 59 aa13.91□□□□□ -0.18
SCN1B-206ENST00000638536 TIMM17AQ99595 171 aa13.9□□□□□ -0.18
SCN1B-206ENST00000638536 Q6ZN92 141 aa13.9□□□□□ -0.19
SCN1B-206ENST00000638536 SCGB3A1Q96QR1 104 aa13.9□□□□□ -0.19
SCN1B-206ENST00000638536 A0A096LNJ9 63 aa13.89□□□□□ -0.19
SCN1B-206ENST00000638536 NPSP0C0P6 89 aa13.89□□□□□ -0.19
SCN1B-206ENST00000638536 ERASQ7Z444 233 aa13.89□□□□□ -0.19
SCN1B-206ENST00000638536 G0S2P27469 103 aa13.88□□□□□ -0.19
SCN1B-206ENST00000638536 SYCNQ0VAF6 134 aa13.88□□□□□ -0.19
SCN1B-206ENST00000638536 CIRBPQ14011 172 aaKnown RBP13.88□□□□□ -0.19
SCN1B-206ENST00000638536 Q6ZRU5 148 aa13.88□□□□□ -0.19
SCN1B-206ENST00000638536 CARD19Q96LW7 228 aa13.88□□□□□ -0.19
SCN1B-206ENST00000638536 LINC00528Q8N1L1 170 aa13.87□□□□□ -0.19
SCN1B-206ENST00000638536 C2orf88Q9BSF0 95 aa13.87□□□□□ -0.19
SCN1B-206ENST00000638536 FLG2Q5D862 2391 aaPredicted RBP13.87□□□□□ -0.19
SCN1B-206ENST00000638536 A0A087WZ39 114 aa13.86□□□□□ -0.19
SCN1B-206ENST00000638536 LINC00614P0C842 121 aa13.86□□□□□ -0.19
SCN1B-206ENST00000638536 PMCHL1Q16048 86 aa13.86□□□□□ -0.19
SCN1B-206ENST00000638536 ORAOV1Q8WV07 137 aa13.86□□□□□ -0.19
SCN1B-206ENST00000638536 APOMO95445 188 aa13.86□□□□□ -0.19
SCN1B-206ENST00000638536 SPAG11BQ08648 103 aa13.86□□□□□ -0.19
SCN1B-206ENST00000638536 FAM229AH3BQW9 127 aa13.85□□□□□ -0.19
SCN1B-206ENST00000638536 FAM19A3Q7Z5A8 133 aa13.85□□□□□ -0.19
SCN1B-206ENST00000638536 SPACA4Q8TDM5 124 aa13.85□□□□□ -0.19
SCN1B-206ENST00000638536 MYCBP2O75592 4640 aa13.84□□□□□ -0.19
SCN1B-206ENST00000638536 OR10D4PQ8NGN7 298 aa13.84□□□□□ -0.19
SCN1B-206ENST00000638536 CAMK2N2Q96S95 79 aa13.84□□□□□ -0.19
SCN1B-206ENST00000638536 A0A096LNI7 61 aa13.83□□□□□ -0.2
SCN1B-206ENST00000638536 IGKV2-24A0A0C4DH68 120 aa13.83□□□□□ -0.2
SCN1B-206ENST00000638536 A0A087WYN8 130 aa13.82□□□□□ -0.2
SCN1B-206ENST00000638536 A0A0J9YXV3 536 aa13.82□□□□□ -0.2
SCN1B-206ENST00000638536 KIAA0087Q14695 138 aa13.82□□□□□ -0.2
SCN1B-206ENST00000638536 C2orf48Q96LS8 159 aa13.82□□□□□ -0.2
SCN1B-206ENST00000638536 PAPPA-AS1Q5QFB9 102 aa13.82□□□□□ -0.2
SCN1B-206ENST00000638536 C10orf25Q5T742 122 aa13.82□□□□□ -0.2
SCN1B-206ENST00000638536 TRGC2P03986 189 aa13.81□□□□□ -0.2
SCN1B-206ENST00000638536 DPH3Q96FX2 82 aa13.81□□□□□ -0.2
SCN1B-206ENST00000638536 CST9LQ9H4G1 147 aa13.8□□□□□ -0.2
SCN1B-206ENST00000638536 CDKN2A-AS1Q9UH64 79 aa13.8□□□□□ -0.2
SCN1B-206ENST00000638536 COLCA2A8K830 154 aa13.79□□□□□ -0.2
SCN1B-206ENST00000638536 SCO1O75880 301 aa13.79□□□□□ -0.2
SCN1B-206ENST00000638536 KRTAP10-4P60372 401 aaPredicted RBP13.79□□□□□ -0.2
SCN1B-206ENST00000638536 LINC01549A6NIU2 74 aa13.79□□□□□ -0.2
SCN1B-206ENST00000638536 MAJINQ3KP22 176 aa13.79□□□□□ -0.2
SCN1B-206ENST00000638536 UNQ6190/PRO20217Q6UXQ8 127 aa13.79□□□□□ -0.2
SCN1B-206ENST00000638536 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.77□□□□□ -0.21
SCN1B-206ENST00000638536 HBDP02042 147 aa13.77□□□□□ -0.21
SCN1B-206ENST00000638536 PDZD11Q5EBL8 140 aa13.77□□□□□ -0.21
SCN1B-206ENST00000638536 PKHD1L1Q86WI1 4243 aa13.76□□□□□ -0.21
SCN1B-206ENST00000638536 INAFM2P0DMQ5 153 aa13.76□□□□□ -0.21
SCN1B-206ENST00000638536 HERVK_113P63121 156 aa13.76□□□□□ -0.21
SCN1B-206ENST00000638536 PMVKQ15126 192 aa13.76□□□□□ -0.21
SCN1B-206ENST00000638536 C2orf82Q6UX34 121 aa13.76□□□□□ -0.21
SCN1B-206ENST00000638536 LINC01561Q8N1V8 128 aa13.76□□□□□ -0.21
SCN1B-206ENST00000638536 PLAC8Q9NZF1 115 aa13.76□□□□□ -0.21
SCN1B-206ENST00000638536 TMA7Q9Y2S6 64 aaKnown RBP13.76□□□□□ -0.21
SCN1B-206ENST00000638536 RAB5BP61020 215 aa13.75□□□□□ -0.21
SCN1B-206ENST00000638536 GEMIN7Q9H840 131 aaKnown RBP13.75□□□□□ -0.21
SCN1B-206ENST00000638536 C6orf48Q9UBA6 75 aa13.75□□□□□ -0.21
SCN1B-206ENST00000638536 STPG4Q8N801 248 aa13.75□□□□□ -0.21
SCN1B-206ENST00000638536 MRPL35Q9NZE8 188 aaKnown RBP13.75□□□□□ -0.21
SCN1B-206ENST00000638536 LOC107984640A0A0U1RRK4 108 aa13.74□□□□□ -0.21
SCN1B-206ENST00000638536 TINCRA0A1B0GVN0 87 aa13.74□□□□□ -0.21
SCN1B-206ENST00000638536 NDUFA1O15239 70 aa13.74□□□□□ -0.21
SCN1B-206ENST00000638536 GAGE2BQ13066 116 aa13.74□□□□□ -0.21
SCN1B-206ENST00000638536 PLA2G1BP04054 148 aaKnown RBP13.73□□□□□ -0.21
SCN1B-206ENST00000638536 PTTG1IPP53801 180 aa13.73□□□□□ -0.21
SCN1B-206ENST00000638536 SEC11AP67812 179 aa13.73□□□□□ -0.21
SCN1B-206ENST00000638536 LINC00469Q8N7U9 141 aa13.72□□□□□ -0.21
SCN1B-206ENST00000638536 TOMM7Q9P0U1 55 aa13.72□□□□□ -0.21
SCN1B-206ENST00000638536 NDUFA6P56556 154 aa13.72□□□□□ -0.21
SCN1B-206ENST00000638536 LINC00310P59036 64 aa13.72□□□□□ -0.21
SCN1B-206ENST00000638536 RNF151Q2KHN1 245 aa13.72□□□□□ -0.21
SCN1B-206ENST00000638536 CHCHD1Q96BP2 118 aaKnown RBP13.72□□□□□ -0.21
SCN1B-206ENST00000638536 IGLV5-45A0A087WSX0 123 aa13.71□□□□□ -0.22
SCN1B-206ENST00000638536 F8WDY8 70 aa13.7□□□□□ -0.22
SCN1B-206ENST00000638536 RPL18AQ02543 176 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms