RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.98□□□□□ -0.17
SCN1B-206ENST00000638536 LINC01546A6NGU7 62 aa13.97□□□□□ -0.17
SCN1B-206ENST00000638536 CHAC1Q9BUX1 264 aa13.97□□□□□ -0.17
SCN1B-206ENST00000638536 IGHV3OR16-9A0A0B4J2B5 98 aa13.97□□□□□ -0.17
SCN1B-206ENST00000638536 CIRBP-AS1Q8TBR5 109 aa13.97□□□□□ -0.17
SCN1B-206ENST00000638536 COX6A2Q02221 97 aa13.96□□□□□ -0.17
SCN1B-206ENST00000638536 TOMM6Q96B49 74 aa13.96□□□□□ -0.17
SCN1B-206ENST00000638536 URB1-AS1Q96HZ7 61 aa13.96□□□□□ -0.17
SCN1B-206ENST00000638536 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.95□□□□□ -0.18
SCN1B-206ENST00000638536 MALP21145 153 aa13.95□□□□□ -0.18
SCN1B-206ENST00000638536 LINC00242Q5T6M2 205 aa13.95□□□□□ -0.18
SCN1B-206ENST00000638536 AMELXQ99217 191 aa13.95□□□□□ -0.18
SCN1B-206ENST00000638536 Q5VSD8 79 aa13.94□□□□□ -0.18
SCN1B-206ENST00000638536 C18orf32Q8TCD1 76 aa13.94□□□□□ -0.18
SCN1B-206ENST00000638536 IGHV3-64A0A075B6Q5 118 aa13.93□□□□□ -0.18
SCN1B-206ENST00000638536 EPM2AB3EWF7 344 aa13.93□□□□□ -0.18
SCN1B-206ENST00000638536 TEX43Q6ZNM6 134 aa13.93□□□□□ -0.18
SCN1B-206ENST00000638536 IGLV4-69A0A075B6H9 119 aa13.93□□□□□ -0.18
SCN1B-206ENST00000638536 CHTF8P0CG12 524 aa13.93□□□□□ -0.18
SCN1B-206ENST00000638536 UBE2D1P51668 147 aa13.93□□□□□ -0.18
SCN1B-206ENST00000638536 VCX2Q9H322 139 aa13.92□□□□□ -0.18
SCN1B-206ENST00000638536 ZNF561-AS1K7EIQ3 104 aa13.91□□□□□ -0.18
SCN1B-206ENST00000638536 FA2HQ7L5A8 372 aa13.91□□□□□ -0.18
SCN1B-206ENST00000638536 SMCO4Q9NRQ5 59 aa13.91□□□□□ -0.18
SCN1B-206ENST00000638536 TIMM17AQ99595 171 aa13.9□□□□□ -0.18
SCN1B-206ENST00000638536 Q6ZN92 141 aa13.9□□□□□ -0.19
SCN1B-206ENST00000638536 SCGB3A1Q96QR1 104 aa13.9□□□□□ -0.19
SCN1B-206ENST00000638536 A0A096LNJ9 63 aa13.89□□□□□ -0.19
SCN1B-206ENST00000638536 NPSP0C0P6 89 aa13.89□□□□□ -0.19
SCN1B-206ENST00000638536 ERASQ7Z444 233 aa13.89□□□□□ -0.19
SCN1B-206ENST00000638536 G0S2P27469 103 aa13.88□□□□□ -0.19
SCN1B-206ENST00000638536 SYCNQ0VAF6 134 aa13.88□□□□□ -0.19
SCN1B-206ENST00000638536 CIRBPQ14011 172 aaKnown RBP13.88□□□□□ -0.19
SCN1B-206ENST00000638536 Q6ZRU5 148 aa13.88□□□□□ -0.19
SCN1B-206ENST00000638536 CARD19Q96LW7 228 aa13.88□□□□□ -0.19
SCN1B-206ENST00000638536 LINC00528Q8N1L1 170 aa13.87□□□□□ -0.19
SCN1B-206ENST00000638536 C2orf88Q9BSF0 95 aa13.87□□□□□ -0.19
SCN1B-206ENST00000638536 FLG2Q5D862 2391 aaPredicted RBP13.87□□□□□ -0.19
SCN1B-206ENST00000638536 A0A087WZ39 114 aa13.86□□□□□ -0.19
SCN1B-206ENST00000638536 LINC00614P0C842 121 aa13.86□□□□□ -0.19
SCN1B-206ENST00000638536 PMCHL1Q16048 86 aa13.86□□□□□ -0.19
SCN1B-206ENST00000638536 ORAOV1Q8WV07 137 aa13.86□□□□□ -0.19
SCN1B-206ENST00000638536 APOMO95445 188 aa13.86□□□□□ -0.19
SCN1B-206ENST00000638536 SPAG11BQ08648 103 aa13.86□□□□□ -0.19
SCN1B-206ENST00000638536 FAM229AH3BQW9 127 aa13.85□□□□□ -0.19
SCN1B-206ENST00000638536 FAM19A3Q7Z5A8 133 aa13.85□□□□□ -0.19
SCN1B-206ENST00000638536 SPACA4Q8TDM5 124 aa13.85□□□□□ -0.19
SCN1B-206ENST00000638536 MYCBP2O75592 4640 aa13.84□□□□□ -0.19
SCN1B-206ENST00000638536 OR10D4PQ8NGN7 298 aa13.84□□□□□ -0.19
SCN1B-206ENST00000638536 CAMK2N2Q96S95 79 aa13.84□□□□□ -0.19
SCN1B-206ENST00000638536 A0A096LNI7 61 aa13.83□□□□□ -0.2
SCN1B-206ENST00000638536 IGKV2-24A0A0C4DH68 120 aa13.83□□□□□ -0.2
SCN1B-206ENST00000638536 A0A087WYN8 130 aa13.82□□□□□ -0.2
SCN1B-206ENST00000638536 A0A0J9YXV3 536 aa13.82□□□□□ -0.2
SCN1B-206ENST00000638536 KIAA0087Q14695 138 aa13.82□□□□□ -0.2
SCN1B-206ENST00000638536 C2orf48Q96LS8 159 aa13.82□□□□□ -0.2
SCN1B-206ENST00000638536 PAPPA-AS1Q5QFB9 102 aa13.82□□□□□ -0.2
SCN1B-206ENST00000638536 C10orf25Q5T742 122 aa13.82□□□□□ -0.2
SCN1B-206ENST00000638536 TRGC2P03986 189 aa13.81□□□□□ -0.2
SCN1B-206ENST00000638536 DPH3Q96FX2 82 aa13.81□□□□□ -0.2
SCN1B-206ENST00000638536 CST9LQ9H4G1 147 aa13.8□□□□□ -0.2
SCN1B-206ENST00000638536 CDKN2A-AS1Q9UH64 79 aa13.8□□□□□ -0.2
SCN1B-206ENST00000638536 COLCA2A8K830 154 aa13.79□□□□□ -0.2
SCN1B-206ENST00000638536 SCO1O75880 301 aa13.79□□□□□ -0.2
SCN1B-206ENST00000638536 KRTAP10-4P60372 401 aaPredicted RBP13.79□□□□□ -0.2
SCN1B-206ENST00000638536 LINC01549A6NIU2 74 aa13.79□□□□□ -0.2
SCN1B-206ENST00000638536 MAJINQ3KP22 176 aa13.79□□□□□ -0.2
SCN1B-206ENST00000638536 UNQ6190/PRO20217Q6UXQ8 127 aa13.79□□□□□ -0.2
SCN1B-206ENST00000638536 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.77□□□□□ -0.21
SCN1B-206ENST00000638536 HBDP02042 147 aa13.77□□□□□ -0.21
SCN1B-206ENST00000638536 PDZD11Q5EBL8 140 aa13.77□□□□□ -0.21
SCN1B-206ENST00000638536 PKHD1L1Q86WI1 4243 aa13.76□□□□□ -0.21
SCN1B-206ENST00000638536 INAFM2P0DMQ5 153 aa13.76□□□□□ -0.21
SCN1B-206ENST00000638536 HERVK_113P63121 156 aa13.76□□□□□ -0.21
SCN1B-206ENST00000638536 PMVKQ15126 192 aa13.76□□□□□ -0.21
SCN1B-206ENST00000638536 C2orf82Q6UX34 121 aa13.76□□□□□ -0.21
SCN1B-206ENST00000638536 LINC01561Q8N1V8 128 aa13.76□□□□□ -0.21
SCN1B-206ENST00000638536 PLAC8Q9NZF1 115 aa13.76□□□□□ -0.21
SCN1B-206ENST00000638536 TMA7Q9Y2S6 64 aaKnown RBP13.76□□□□□ -0.21
SCN1B-206ENST00000638536 RAB5BP61020 215 aa13.75□□□□□ -0.21
SCN1B-206ENST00000638536 GEMIN7Q9H840 131 aaKnown RBP13.75□□□□□ -0.21
SCN1B-206ENST00000638536 C6orf48Q9UBA6 75 aa13.75□□□□□ -0.21
SCN1B-206ENST00000638536 STPG4Q8N801 248 aa13.75□□□□□ -0.21
SCN1B-206ENST00000638536 MRPL35Q9NZE8 188 aaKnown RBP13.75□□□□□ -0.21
SCN1B-206ENST00000638536 LOC107984640A0A0U1RRK4 108 aa13.74□□□□□ -0.21
SCN1B-206ENST00000638536 TINCRA0A1B0GVN0 87 aa13.74□□□□□ -0.21
SCN1B-206ENST00000638536 NDUFA1O15239 70 aa13.74□□□□□ -0.21
SCN1B-206ENST00000638536 GAGE2BQ13066 116 aa13.74□□□□□ -0.21
SCN1B-206ENST00000638536 PLA2G1BP04054 148 aaKnown RBP13.73□□□□□ -0.21
SCN1B-206ENST00000638536 PTTG1IPP53801 180 aa13.73□□□□□ -0.21
SCN1B-206ENST00000638536 SEC11AP67812 179 aa13.73□□□□□ -0.21
SCN1B-206ENST00000638536 LINC00469Q8N7U9 141 aa13.72□□□□□ -0.21
SCN1B-206ENST00000638536 TOMM7Q9P0U1 55 aa13.72□□□□□ -0.21
SCN1B-206ENST00000638536 NDUFA6P56556 154 aa13.72□□□□□ -0.21
SCN1B-206ENST00000638536 LINC00310P59036 64 aa13.72□□□□□ -0.21
SCN1B-206ENST00000638536 RNF151Q2KHN1 245 aa13.72□□□□□ -0.21
SCN1B-206ENST00000638536 CHCHD1Q96BP2 118 aaKnown RBP13.72□□□□□ -0.21
SCN1B-206ENST00000638536 IGLV5-45A0A087WSX0 123 aa13.71□□□□□ -0.22
SCN1B-206ENST00000638536 F8WDY8 70 aa13.7□□□□□ -0.22
SCN1B-206ENST00000638536 RPL18AQ02543 176 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms