RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 NDUFA7O95182 113 aa10.45□□□□□ -0.74
SCARB2-208ENST00000638372 COL4A2P08572 1712 aa10.45□□□□□ -0.74
SCARB2-208ENST00000638372 RBM3P98179 157 aaKnown RBP10.45□□□□□ -0.74
SCARB2-208ENST00000638372 MAST4O15021 2626 aa10.45□□□□□ -0.74
SCARB2-208ENST00000638372 H7C423 109 aa10.45□□□□□ -0.74
SCARB2-208ENST00000638372 IBA57-AS1B1ANH7 110 aa10.45□□□□□ -0.74
SCARB2-208ENST00000638372 SLPIP03973 132 aa10.44□□□□□ -0.74
SCARB2-208ENST00000638372 MGAQ8IWI9 3026 aa10.44□□□□□ -0.74
SCARB2-208ENST00000638372 A0A096LNJ9 63 aa10.44□□□□□ -0.74
SCARB2-208ENST00000638372 PRB2P02812 416 aaPredicted RBP10.44□□□□□ -0.74
SCARB2-208ENST00000638372 NREPQ16612 68 aa10.44□□□□□ -0.74
SCARB2-208ENST00000638372 TMEM256-PLSCR3K7ERE1 68 aa10.43□□□□□ -0.74
SCARB2-208ENST00000638372 SHISA2Q6UWI4 295 aa10.43□□□□□ -0.74
SCARB2-208ENST00000638372 COX8CQ7Z4L0 72 aa10.42□□□□□ -0.74
SCARB2-208ENST00000638372 A0A1B0GX51 115 aa10.42□□□□□ -0.74
SCARB2-208ENST00000638372 POM121L12Q8N7R1 296 aa10.42□□□□□ -0.74
SCARB2-208ENST00000638372 SPANXDQ9BXN6 97 aa10.42□□□□□ -0.74
SCARB2-208ENST00000638372 COX7BP24311 80 aa10.42□□□□□ -0.74
SCARB2-208ENST00000638372 PTPRBP23467 1997 aa10.41□□□□□ -0.74
SCARB2-208ENST00000638372 UBE2D3P61077 147 aa10.41□□□□□ -0.74
SCARB2-208ENST00000638372 UBE2D2P62837 147 aa10.41□□□□□ -0.74
SCARB2-208ENST00000638372 UBE2AP49459 152 aa10.41□□□□□ -0.74
SCARB2-208ENST00000638372 UBE2D1P51668 147 aa10.41□□□□□ -0.74
SCARB2-208ENST00000638372 C1orf158Q8N1D5 194 aa10.41□□□□□ -0.74
SCARB2-208ENST00000638372 LINC00959A0A1B0GUT2 108 aa10.4□□□□□ -0.74
SCARB2-208ENST00000638372 KPRPQ5T749 579 aaPredicted RBP10.4□□□□□ -0.74
SCARB2-208ENST00000638372 C6orf99Q4VX62 202 aa10.4□□□□□ -0.74
SCARB2-208ENST00000638372 CITED1Q99966 193 aa10.4□□□□□ -0.74
SCARB2-208ENST00000638372 IGLV1-51P01701 117 aa10.4□□□□□ -0.75
SCARB2-208ENST00000638372 MRPS36P82909 103 aaKnown RBP10.4□□□□□ -0.75
SCARB2-208ENST00000638372 CLUHP3Q96NS8 147 aa10.39□□□□□ -0.75
SCARB2-208ENST00000638372 HIGD2AQ9BW72 106 aa10.39□□□□□ -0.75
SCARB2-208ENST00000638372 CDC42SE2Q9NRR3 84 aa10.39□□□□□ -0.75
SCARB2-208ENST00000638372 KLK5Q9Y337 293 aaPredicted RBP10.39□□□□□ -0.75
SCARB2-208ENST00000638372 TRBV30A0A0K0K1B3 111 aa10.39□□□□□ -0.75
SCARB2-208ENST00000638372 BRI3O95415 125 aa10.39□□□□□ -0.75
SCARB2-208ENST00000638372 LINC00242Q5T6M2 205 aa10.39□□□□□ -0.75
SCARB2-208ENST00000638372 MT-ATP8P03928 68 aa10.38□□□□□ -0.75
SCARB2-208ENST00000638372 IGHV4-30-4P0DP06 118 aa10.38□□□□□ -0.75
SCARB2-208ENST00000638372 CD164L2Q6UWJ8 174 aa10.38□□□□□ -0.75
SCARB2-208ENST00000638372 SPATA25Q9BR10 227 aa10.38□□□□□ -0.75
SCARB2-208ENST00000638372 MAP1AP78559 2803 aaPredicted RBP10.38□□□□□ -0.75
SCARB2-208ENST00000638372 SS18L2Q9UHA2 77 aa10.38□□□□□ -0.75
SCARB2-208ENST00000638372 NDUFS5O43920 106 aa10.37□□□□□ -0.75
SCARB2-208ENST00000638372 KIR2DL5BQ8NHK3 375 aa10.37□□□□□ -0.75
SCARB2-208ENST00000638372 LINC00694P0DN24 101 aa10.36□□□□□ -0.75
SCARB2-208ENST00000638372 ZNF580Q9UK33 172 aa10.36□□□□□ -0.75
SCARB2-208ENST00000638372 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.36□□□□□ -0.75
SCARB2-208ENST00000638372 PCSK5Q92824 1860 aa10.35□□□□□ -0.75
SCARB2-208ENST00000638372 A0A096LNI7 61 aa10.35□□□□□ -0.75
SCARB2-208ENST00000638372 IGLV4-69A0A075B6H9 119 aa10.35□□□□□ -0.75
SCARB2-208ENST00000638372 LINC00643Q86TS7 51 aa10.35□□□□□ -0.75
SCARB2-208ENST00000638372 IGLV2-18A0A075B6J9 118 aa10.35□□□□□ -0.75
SCARB2-208ENST00000638372 ATOX1O00244 68 aa10.35□□□□□ -0.75
SCARB2-208ENST00000638372 TSPEAR-AS2P59090 65 aa10.35□□□□□ -0.75
SCARB2-208ENST00000638372 SYCNQ0VAF6 134 aa10.35□□□□□ -0.75
SCARB2-208ENST00000638372 Q6ZSN1 163 aa10.35□□□□□ -0.75
SCARB2-208ENST00000638372 TIMM17BO60830 172 aa10.34□□□□□ -0.75
SCARB2-208ENST00000638372 LELP1Q5T871 98 aa10.34□□□□□ -0.75
SCARB2-208ENST00000638372 PKIGQ9Y2B9 76 aa10.33□□□□□ -0.76
SCARB2-208ENST00000638372 CHCHD7Q9BUK0 85 aa10.33□□□□□ -0.76
SCARB2-208ENST00000638372 IGLV4-60A0A075B6I1 120 aa10.32□□□□□ -0.76
SCARB2-208ENST00000638372 CFAP46Q8IYW2 2715 aa10.32□□□□□ -0.76
SCARB2-208ENST00000638372 VPS13AQ96RL7 3174 aa10.32□□□□□ -0.76
SCARB2-208ENST00000638372 H3BQ85 93 aa10.32□□□□□ -0.76
SCARB2-208ENST00000638372 NANOS2P60321 138 aaKnown RBP10.32□□□□□ -0.76
SCARB2-208ENST00000638372 RETNQ9HD89 108 aa10.32□□□□□ -0.76
SCARB2-208ENST00000638372 IGKV2-28A0A075B6P5 120 aa10.31□□□□□ -0.76
SCARB2-208ENST00000638372 IGKV2D-28P01615 120 aa10.31□□□□□ -0.76
SCARB2-208ENST00000638372 SDIM1Q6ZPB5 146 aa10.31□□□□□ -0.76
SCARB2-208ENST00000638372 FLNAP21333 2647 aaKnown RBP10.31□□□□□ -0.76
SCARB2-208ENST00000638372 COX6A2Q02221 97 aa10.31□□□□□ -0.76
SCARB2-208ENST00000638372 FAM19A5Q7Z5A7 132 aaPredicted RBP10.31□□□□□ -0.76
SCARB2-208ENST00000638372 TRAV10A0A0B4J240 114 aa10.31□□□□□ -0.76
SCARB2-208ENST00000638372 SMIM1B2RUZ4 78 aa10.31□□□□□ -0.76
SCARB2-208ENST00000638372 TRAV23DV6A0A075B6W5 121 aa10.3□□□□□ -0.76
SCARB2-208ENST00000638372 LST1O00453 97 aa10.3□□□□□ -0.76
SCARB2-208ENST00000638372 SMIM11BQ8TCY0 68 aa10.3□□□□□ -0.76
SCARB2-208ENST00000638372 A0A0J9YWU9 116 aa10.29□□□□□ -0.76
SCARB2-208ENST00000638372 Q6ZQY7 126 aa10.29□□□□□ -0.76
SCARB2-208ENST00000638372 PDE6GP18545 87 aa10.29□□□□□ -0.76
SCARB2-208ENST00000638372 SCXQ7RTU7 201 aa10.28□□□□□ -0.76
SCARB2-208ENST00000638372 SMIM20Q8N5G0 67 aa10.28□□□□□ -0.76
SCARB2-208ENST00000638372 CDH23Q9H251 3354 aa10.28□□□□□ -0.76
SCARB2-208ENST00000638372 CYSRT1A8MQ03 144 aa10.28□□□□□ -0.76
SCARB2-208ENST00000638372 FHL2Q14192 279 aa10.28□□□□□ -0.76
SCARB2-208ENST00000638372 ZNF292O60281 2723 aa10.28□□□□□ -0.76
SCARB2-208ENST00000638372 NDUFB1O75438 58 aa10.28□□□□□ -0.76
SCARB2-208ENST00000638372 C9orf116Q5BN46 136 aaPredicted RBP10.28□□□□□ -0.76
SCARB2-208ENST00000638372 UNQ6190/PRO20217Q6UXQ8 127 aa10.28□□□□□ -0.76
SCARB2-208ENST00000638372 FAM19A1Q7Z5A9 133 aa10.27□□□□□ -0.77
SCARB2-208ENST00000638372 KIF25-AS1Q9Y6Z4 181 aa10.27□□□□□ -0.77
SCARB2-208ENST00000638372 ITPR3Q14573 2671 aa10.27□□□□□ -0.77
SCARB2-208ENST00000638372 A0A087WZ39 114 aa10.27□□□□□ -0.77
SCARB2-208ENST00000638372 ADAMTSL4-AS1Q5T5F5 129 aa10.27□□□□□ -0.77
SCARB2-208ENST00000638372 RNF183Q96D59 192 aa10.27□□□□□ -0.77
SCARB2-208ENST00000638372 HELZ2Q9BYK8 2649 aaKnown RBP10.26□□□□□ -0.77
SCARB2-208ENST00000638372 AKAP13Q12802 2813 aa10.26□□□□□ -0.77
SCARB2-208ENST00000638372 BEAN1Q3B7T3 259 aa10.26□□□□□ -0.77
SCARB2-208ENST00000638372 C14orf177Q52M58 125 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms