RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 BOD1L2Q8IYS8 172 aa5.23□□□□□ -1.57
PNKP-229ENST00000637897 RPL36ALQ969Q0 106 aaKnown RBP5.23□□□□□ -1.57
PNKP-229ENST00000637897 CST9LQ9H4G1 147 aa5.23□□□□□ -1.57
PNKP-229ENST00000637897 SPANXA1Q9NS26 97 aa5.23□□□□□ -1.57
PNKP-229ENST00000637897 FLG2Q5D862 2391 aaPredicted RBP5.22□□□□□ -1.57
PNKP-229ENST00000637897 TRBV6-4A0A1B0GX49 114 aa5.22□□□□□ -1.57
PNKP-229ENST00000637897 FGF6P10767 208 aa5.22□□□□□ -1.57
PNKP-229ENST00000637897 NMUP48645 174 aa5.22□□□□□ -1.57
PNKP-229ENST00000637897 HAMPP81172 84 aa5.22□□□□□ -1.57
PNKP-229ENST00000637897 SMAGPQ0VAQ4 97 aa5.22□□□□□ -1.57
PNKP-229ENST00000637897 TMEM97Q5BJF2 176 aa5.22□□□□□ -1.57
PNKP-229ENST00000637897 LINC01556Q5JQF7 62 aa5.22□□□□□ -1.57
PNKP-229ENST00000637897 COL5A1-AS1Q5SY13 56 aa5.22□□□□□ -1.57
PNKP-229ENST00000637897 DAZ4Q86SG3 579 aaKnown RBP5.22□□□□□ -1.57
PNKP-229ENST00000637897 DAZ3Q9NR90 486 aaKnown RBP5.22□□□□□ -1.57
PNKP-229ENST00000637897 IGHV3-38A0A0C4DH36 116 aa5.21□□□□□ -1.58
PNKP-229ENST00000637897 IBA57-AS1B1ANH7 110 aa5.21□□□□□ -1.58
PNKP-229ENST00000637897 HERVK_113P61574 105 aa5.21□□□□□ -1.58
PNKP-229ENST00000637897 BATFQ16520 125 aa5.21□□□□□ -1.58
PNKP-229ENST00000637897 TIMM21Q9BVV7 248 aa5.21□□□□□ -1.58
PNKP-229ENST00000637897 VCX2Q9H322 139 aa5.21□□□□□ -1.58
PNKP-229ENST00000637897 PGPEP1Q9NXJ5 209 aa5.21□□□□□ -1.58
PNKP-229ENST00000637897 FAM30AQ9NZY2 134 aa5.21□□□□□ -1.58
PNKP-229ENST00000637897 IGLV4-69A0A075B6H9 119 aa5.2□□□□□ -1.58
PNKP-229ENST00000637897 IGLV4-3A0A075B6K6 122 aa5.2□□□□□ -1.58
PNKP-229ENST00000637897 E9PLD3 99 aa5.2□□□□□ -1.58
PNKP-229ENST00000637897 HINT1P49773 126 aaPredicted RBP5.2□□□□□ -1.58
PNKP-229ENST00000637897 UBE2D3P61077 147 aa5.2□□□□□ -1.58
PNKP-229ENST00000637897 UBE2D2P62837 147 aa5.2□□□□□ -1.58
PNKP-229ENST00000637897 LELP1Q5T871 98 aa5.2□□□□□ -1.58
PNKP-229ENST00000637897 C2orf91Q6ZV80 131 aa5.2□□□□□ -1.58
PNKP-229ENST00000637897 NFE4Q86UQ8 179 aa5.2□□□□□ -1.58
PNKP-229ENST00000637897 DEFB104AQ8WTQ1 72 aa5.2□□□□□ -1.58
PNKP-229ENST00000637897 PRADC1Q9BSG0 188 aa5.2□□□□□ -1.58
PNKP-229ENST00000637897 CHCHD7Q9BUK0 85 aa5.2□□□□□ -1.58
PNKP-229ENST00000637897 HIGD1BQ9P298 99 aa5.2□□□□□ -1.58
PNKP-229ENST00000637897 IGKV2D-26A0A0A0MRZ7 120 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 GAGE12JA6NER3 117 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 C11orf86A6NJI1 115 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 IGHV3-30P01768 117 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 IGHV3-33P01772 117 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 IGHV3-30-3P0DP02 117 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 IGHV3-30-5P0DP03 117 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 MRPS36P82909 103 aaKnown RBP5.19□□□□□ -1.58
PNKP-229ENST00000637897 HSD52Q0P140 79 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 GAGE1Q13065 139 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 GAGE4Q13068 117 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 GAGE5Q13069 117 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 GAGE13Q4V321 117 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 MPV17L2Q567V2 206 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 PCP2Q8IVA1 136 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 ATP6V0E2Q8NHE4 81 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 AMELXQ99217 191 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 GTSF1LQ9H1H1 148 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 UBE2D4Q9Y2X8 147 aa5.19□□□□□ -1.58
PNKP-229ENST00000637897 TRAV8-6A0A0B4J262 113 aa5.18□□□□□ -1.58
PNKP-229ENST00000637897 A0A1B0GV90 55 aa5.18□□□□□ -1.58
PNKP-229ENST00000637897 H7C423 109 aa5.18□□□□□ -1.58
PNKP-229ENST00000637897 K7EP13 123 aa5.18□□□□□ -1.58
PNKP-229ENST00000637897 SEC11AP67812 179 aa5.18□□□□□ -1.58
PNKP-229ENST00000637897 BVES-AS1Q5T3Y7 98 aa5.18□□□□□ -1.58
PNKP-229ENST00000637897 TMEM170BQ5T4T1 132 aa5.18□□□□□ -1.58
PNKP-229ENST00000637897 DGAT2L7PQ6IED9 249 aa5.18□□□□□ -1.58
PNKP-229ENST00000637897 OPRPNQ99935 248 aaPredicted RBP5.18□□□□□ -1.58
PNKP-229ENST00000637897 CHAC1Q9BUX1 264 aa5.18□□□□□ -1.58
PNKP-229ENST00000637897 TP73-AS1Q9UF72 201 aa5.18□□□□□ -1.58
PNKP-229ENST00000637897 CSDC2Q9Y534 153 aaKnown RBP5.18□□□□□ -1.58
PNKP-229ENST00000637897 LRP1Q07954 4544 aaKnown RBP5.18□□□□□ -1.58
PNKP-229ENST00000637897 TRBV25-1A0A075B6N4 114 aa5.17□□□□□ -1.58
PNKP-229ENST00000637897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.17□□□□□ -1.58
PNKP-229ENST00000637897 MYMXA0A1B0GTQ4 84 aa5.17□□□□□ -1.58
PNKP-229ENST00000637897 IGKV2-29A2NJV5 120 aaPredicted RBP5.17□□□□□ -1.58
PNKP-229ENST00000637897 SMR3BP02814 79 aaPredicted RBP5.17□□□□□ -1.58
PNKP-229ENST00000637897 TAL2Q16559 108 aa5.17□□□□□ -1.58
PNKP-229ENST00000637897 SH2D6Q7Z4S9 175 aa5.17□□□□□ -1.58
PNKP-229ENST00000637897 Q8N814 137 aa5.17□□□□□ -1.58
PNKP-229ENST00000637897 TMEM243Q9BU79 118 aa5.17□□□□□ -1.58
PNKP-229ENST00000637897 Q9HAA7 133 aa5.17□□□□□ -1.58
PNKP-229ENST00000637897 SRRM2Q9UQ35 2752 aaKnown RBP5.16□□□□□ -1.58
PNKP-229ENST00000637897 TINCRA0A1B0GVN0 87 aa5.16□□□□□ -1.58
PNKP-229ENST00000637897 A6NDN8 102 aa5.16□□□□□ -1.58
PNKP-229ENST00000637897 J3QL48 77 aa5.16□□□□□ -1.58
PNKP-229ENST00000637897 GCSHP23434 173 aa5.16□□□□□ -1.58
PNKP-229ENST00000637897 Q5VSD8 79 aa5.16□□□□□ -1.58
PNKP-229ENST00000637897 C10orf126Q8N4M7 172 aa5.16□□□□□ -1.58
PNKP-229ENST00000637897 NTN5Q8WTR8 489 aaPredicted RBP5.16□□□□□ -1.58
PNKP-229ENST00000637897 ORAOV1Q8WV07 137 aa5.16□□□□□ -1.58
PNKP-229ENST00000637897 FAM104AQ969W3 186 aa5.16□□□□□ -1.58
PNKP-229ENST00000637897 A0A0J9YXV3 536 aa5.15□□□□□ -1.59
PNKP-229ENST00000637897 TMEM223A0PJW6 202 aa5.15□□□□□ -1.59
PNKP-229ENST00000637897 ZNF815PA8K554 130 aa5.15□□□□□ -1.59
PNKP-229ENST00000637897 EPM2AB3EWF7 344 aa5.15□□□□□ -1.59
PNKP-229ENST00000637897 UBE2L6O14933 153 aa5.15□□□□□ -1.59
PNKP-229ENST00000637897 LEPROTO15243 131 aa5.15□□□□□ -1.59
PNKP-229ENST00000637897 ZNF22P17026 224 aaPredicted RBP5.15□□□□□ -1.59
PNKP-229ENST00000637897 ZNF25P17030 456 aaPredicted RBP5.15□□□□□ -1.59
PNKP-229ENST00000637897 AMMECR1LQ6DCA0 310 aa5.15□□□□□ -1.59
PNKP-229ENST00000637897 Q6ZSA8 131 aa5.15□□□□□ -1.59
PNKP-229ENST00000637897 NTM-AS1Q6ZSK4 140 aa5.15□□□□□ -1.59
PNKP-229ENST00000637897 Q6ZUT4 128 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 224.2 ms