RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 SCGB3A1Q96QR1 104 aa8.34□□□□□ -1.07
CLN6-217ENST00000636964 IGLV4-69A0A075B6H9 119 aa8.34□□□□□ -1.07
CLN6-217ENST00000636964 CRYGAP11844 174 aa8.34□□□□□ -1.07
CLN6-217ENST00000636964 PMAIP1Q13794 54 aa8.34□□□□□ -1.07
CLN6-217ENST00000636964 AMELXQ99217 191 aa8.34□□□□□ -1.07
CLN6-217ENST00000636964 TSHBP01222 138 aa8.34□□□□□ -1.07
CLN6-217ENST00000636964 MAST4O15021 2626 aa8.33□□□□□ -1.08
CLN6-217ENST00000636964 C11orf86A6NJI1 115 aa8.33□□□□□ -1.08
CLN6-217ENST00000636964 INSP01308 110 aa8.33□□□□□ -1.08
CLN6-217ENST00000636964 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.33□□□□□ -1.08
CLN6-217ENST00000636964 NDUFC2O95298 119 aa8.32□□□□□ -1.08
CLN6-217ENST00000636964 NTN5Q8WTR8 489 aaPredicted RBP8.32□□□□□ -1.08
CLN6-217ENST00000636964 TEX49A0A1B0GTD5 131 aa8.32□□□□□ -1.08
CLN6-217ENST00000636964 C1orf158Q8N1D5 194 aa8.31□□□□□ -1.08
CLN6-217ENST00000636964 CD164Q04900 197 aa8.31□□□□□ -1.08
CLN6-217ENST00000636964 C2orf66Q6UXQ4 117 aa8.31□□□□□ -1.08
CLN6-217ENST00000636964 POM121L12Q8N7R1 296 aa8.31□□□□□ -1.08
CLN6-217ENST00000636964 C19orf73Q9NVV2 129 aa8.3□□□□□ -1.08
CLN6-217ENST00000636964 P0DMU3 169 aa8.3□□□□□ -1.08
CLN6-217ENST00000636964 FAM231AP0DMU4 169 aa8.3□□□□□ -1.08
CLN6-217ENST00000636964 FAM231CP0DMU5 169 aa8.3□□□□□ -1.08
CLN6-217ENST00000636964 BEAN1Q3B7T3 259 aa8.3□□□□□ -1.08
CLN6-217ENST00000636964 SLC25A29Q8N8R3 303 aa8.3□□□□□ -1.08
CLN6-217ENST00000636964 PRO1854Q9UHT4 67 aa8.3□□□□□ -1.08
CLN6-217ENST00000636964 SDHAF1A6NFY7 115 aa8.29□□□□□ -1.08
CLN6-217ENST00000636964 M0QY20 66 aa8.29□□□□□ -1.08
CLN6-217ENST00000636964 IGHV3-33P01772 117 aa8.29□□□□□ -1.08
CLN6-217ENST00000636964 PRIMA1Q86XR5 153 aa8.29□□□□□ -1.08
CLN6-217ENST00000636964 C11orf72Q8NBR9 251 aa8.29□□□□□ -1.08
CLN6-217ENST00000636964 NBEAL1Q6ZS30 2694 aa8.29□□□□□ -1.08
CLN6-217ENST00000636964 TMEM263Q8WUH6 116 aaKnown RBP8.29□□□□□ -1.08
CLN6-217ENST00000636964 Q9UF83 564 aa8.29□□□□□ -1.08
CLN6-217ENST00000636964 STAB1Q9NY15 2570 aa8.29□□□□□ -1.08
CLN6-217ENST00000636964 TRBV7-7A0A0K0K1E9 115 aa8.28□□□□□ -1.08
CLN6-217ENST00000636964 GIG44P09565 113 aaPredicted RBP8.28□□□□□ -1.08
CLN6-217ENST00000636964 PPP1R17O96001 155 aa8.28□□□□□ -1.08
CLN6-217ENST00000636964 POLR2KP53803 58 aaKnown RBP8.28□□□□□ -1.08
CLN6-217ENST00000636964 ORMDL2Q53FV1 153 aa8.28□□□□□ -1.08
CLN6-217ENST00000636964 NOTCH1P46531 2555 aa8.28□□□□□ -1.08
CLN6-217ENST00000636964 H7C2G1 150 aa8.28□□□□□ -1.08
CLN6-217ENST00000636964 DGAT2L7PQ6IED9 249 aa8.27□□□□□ -1.09
CLN6-217ENST00000636964 Q6ZSN1 163 aa8.27□□□□□ -1.09
CLN6-217ENST00000636964 SPANXDQ9BXN6 97 aa8.27□□□□□ -1.09
CLN6-217ENST00000636964 CYSTM1Q9H1C7 97 aa8.27□□□□□ -1.09
CLN6-217ENST00000636964 RPL39P62891 51 aaKnown RBP8.26□□□□□ -1.09
CLN6-217ENST00000636964 VCYO14598 125 aa8.26□□□□□ -1.09
CLN6-217ENST00000636964 ATP5G1P05496 136 aa8.26□□□□□ -1.09
CLN6-217ENST00000636964 CMC4P56277 68 aaPredicted RBP8.26□□□□□ -1.09
CLN6-217ENST00000636964 TRRAPQ9Y4A5 3859 aa8.26□□□□□ -1.09
CLN6-217ENST00000636964 IGIPA6NJ69 53 aa8.26□□□□□ -1.09
CLN6-217ENST00000636964 TRGV1A0A0A0MS02 117 aa8.25□□□□□ -1.09
CLN6-217ENST00000636964 H3BS24 57 aa8.25□□□□□ -1.09
CLN6-217ENST00000636964 RPL13AP40429 203 aaKnown RBP8.25□□□□□ -1.09
CLN6-217ENST00000636964 LINC01600Q96MT4 127 aa8.25□□□□□ -1.09
CLN6-217ENST00000636964 BAHCC1Q9P281 2608 aa8.25□□□□□ -1.09
CLN6-217ENST00000636964 CYSRT1A8MQ03 144 aa8.25□□□□□ -1.09
CLN6-217ENST00000636964 IGHV3-53P01767 116 aa8.24□□□□□ -1.09
CLN6-217ENST00000636964 MRPL55Q7Z7F7 128 aaKnown RBP8.24□□□□□ -1.09
CLN6-217ENST00000636964 LINC00467Q9BRT7 94 aa8.24□□□□□ -1.09
CLN6-217ENST00000636964 IMUPQ9GZP8 106 aa8.24□□□□□ -1.09
CLN6-217ENST00000636964 Q6ZTI0 123 aa8.24□□□□□ -1.09
CLN6-217ENST00000636964 NOP10Q9NPE3 64 aaKnown RBP8.24□□□□□ -1.09
CLN6-217ENST00000636964 TRBV6-5A0A0K0K1A5 114 aa8.23□□□□□ -1.09
CLN6-217ENST00000636964 TRBV27A0A0K0K1C4 114 aa8.23□□□□□ -1.09
CLN6-217ENST00000636964 C11orf45Q8TAV5 145 aa8.23□□□□□ -1.09
CLN6-217ENST00000636964 TRIAP1O43715 76 aa8.23□□□□□ -1.09
CLN6-217ENST00000636964 MUSTN1Q8IVN3 82 aa8.23□□□□□ -1.09
CLN6-217ENST00000636964 NPC2P61916 151 aa8.23□□□□□ -1.09
CLN6-217ENST00000636964 COL6A5A8TX70 2615 aa8.22□□□□□ -1.09
CLN6-217ENST00000636964 TMEM170BQ5T4T1 132 aa8.22□□□□□ -1.09
CLN6-217ENST00000636964 CSNK1G2-AS1Q8NCQ2 148 aa8.22□□□□□ -1.09
CLN6-217ENST00000636964 OPRPNQ99935 248 aaPredicted RBP8.22□□□□□ -1.09
CLN6-217ENST00000636964 IGHV3-38A0A0C4DH36 116 aa8.21□□□□□ -1.09
CLN6-217ENST00000636964 H7C423 109 aa8.21□□□□□ -1.09
CLN6-217ENST00000636964 C9orf66Q5T8R8 295 aa8.21□□□□□ -1.09
CLN6-217ENST00000636964 FBN1P35555 2871 aaKnown RBP8.21□□□□□ -1.09
CLN6-217ENST00000636964 A0A0B4J2C4 111 aa8.21□□□□□ -1.1
CLN6-217ENST00000636964 TRBV10-2A0A0K0K1G8 114 aa8.21□□□□□ -1.1
CLN6-217ENST00000636964 I3L3M4 83 aa8.21□□□□□ -1.1
CLN6-217ENST00000636964 IGHV3-64A0A075B6Q5 118 aa8.2□□□□□ -1.1
CLN6-217ENST00000636964 ZNF22P17026 224 aaPredicted RBP8.2□□□□□ -1.1
CLN6-217ENST00000636964 UBE2WQ96B02 151 aa8.2□□□□□ -1.1
CLN6-217ENST00000636964 ATOX1O00244 68 aa8.2□□□□□ -1.1
CLN6-217ENST00000636964 ATXN8Q156A1 80 aa8.2□□□□□ -1.1
CLN6-217ENST00000636964 PLAC8L1A1L4L8 177 aa8.19□□□□□ -1.1
CLN6-217ENST00000636964 PIK3CD-AS1Q5SR53 167 aa8.19□□□□□ -1.1
CLN6-217ENST00000636964 KRTAP24-1Q3LI83 254 aa8.18□□□□□ -1.1
CLN6-217ENST00000636964 LITAFQ99732 161 aa8.18□□□□□ -1.1
CLN6-217ENST00000636964 H3BT86 120 aa8.18□□□□□ -1.1
CLN6-217ENST00000636964 CIRBPQ14011 172 aaKnown RBP8.18□□□□□ -1.1
CLN6-217ENST00000636964 TRGV2A0A075B6R0 118 aa8.18□□□□□ -1.1
CLN6-217ENST00000636964 TMEM223A0PJW6 202 aa8.18□□□□□ -1.1
CLN6-217ENST00000636964 CLEC2BQ92478 149 aa8.18□□□□□ -1.1
CLN6-217ENST00000636964 C16orf74Q96GX8 76 aa8.18□□□□□ -1.1
CLN6-217ENST00000636964 TRBV30A0A0K0K1B3 111 aa8.17□□□□□ -1.1
CLN6-217ENST00000636964 C2orf82Q6UX34 121 aa8.17□□□□□ -1.1
CLN6-217ENST00000636964 C20orf203Q8NBC4 194 aa8.17□□□□□ -1.1
CLN6-217ENST00000636964 SMCR5Q8TEV8 140 aa8.17□□□□□ -1.1
CLN6-217ENST00000636964 LGALS3P17931 250 aaKnown RBP8.16□□□□□ -1.1
CLN6-217ENST00000636964 Q1RN00 199 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms