RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 LINC00242Q5T6M2 205 aa10.54□□□□□ -0.72
CLN6-216ENST00000636876 CST9LQ9H4G1 147 aa10.54□□□□□ -0.72
CLN6-216ENST00000636876 NDUFA6P56556 154 aa10.53□□□□□ -0.72
CLN6-216ENST00000636876 IFI27L1Q96BM0 104 aa10.53□□□□□ -0.72
CLN6-216ENST00000636876 PKHD1P08F94 4074 aa10.52□□□□□ -0.72
CLN6-216ENST00000636876 COX7A2LO14548 114 aa10.52□□□□□ -0.73
CLN6-216ENST00000636876 C14orf177Q52M58 125 aa10.52□□□□□ -0.73
CLN6-216ENST00000636876 FAM19A3Q7Z5A8 133 aa10.52□□□□□ -0.73
CLN6-216ENST00000636876 Q8N814 137 aa10.52□□□□□ -0.73
CLN6-216ENST00000636876 PCLOQ9Y6V0 5065 aa10.52□□□□□ -0.73
CLN6-216ENST00000636876 IGHV3OR16-9A0A0B4J2B5 98 aa10.51□□□□□ -0.73
CLN6-216ENST00000636876 LEPROTL1O95214 131 aa10.51□□□□□ -0.73
CLN6-216ENST00000636876 COX6A2Q02221 97 aa10.51□□□□□ -0.73
CLN6-216ENST00000636876 CFAP161Q6P656 301 aa10.51□□□□□ -0.73
CLN6-216ENST00000636876 A0A0J9YXV3 536 aa10.5□□□□□ -0.73
CLN6-216ENST00000636876 SEC11AP67812 179 aa10.5□□□□□ -0.73
CLN6-216ENST00000636876 SPATA12Q7Z6I5 190 aa10.5□□□□□ -0.73
CLN6-216ENST00000636876 C5orf38Q86SI9 138 aa10.5□□□□□ -0.73
CLN6-216ENST00000636876 C15orf56Q8N910 161 aa10.5□□□□□ -0.73
CLN6-216ENST00000636876 HSPB8Q9UJY1 196 aa10.5□□□□□ -0.73
CLN6-216ENST00000636876 IGHV1-58A0A0C4DH39 117 aa10.49□□□□□ -0.73
CLN6-216ENST00000636876 PRSS1P07477 247 aa10.49□□□□□ -0.73
CLN6-216ENST00000636876 FABP4P15090 132 aa10.49□□□□□ -0.73
CLN6-216ENST00000636876 KRTAP10-2P60368 255 aa10.49□□□□□ -0.73
CLN6-216ENST00000636876 MALP21145 153 aa10.48□□□□□ -0.73
CLN6-216ENST00000636876 HERVK_113P63121 156 aa10.48□□□□□ -0.73
CLN6-216ENST00000636876 GEMIN7Q9H840 131 aaKnown RBP10.48□□□□□ -0.73
CLN6-216ENST00000636876 A0A087WZ39 114 aa10.47□□□□□ -0.73
CLN6-216ENST00000636876 TRAV12-1A0A0B4J245 112 aa10.47□□□□□ -0.73
CLN6-216ENST00000636876 TINCRA0A1B0GVN0 87 aa10.47□□□□□ -0.73
CLN6-216ENST00000636876 NTN5Q8WTR8 489 aaPredicted RBP10.47□□□□□ -0.73
CLN6-216ENST00000636876 PACRGQ96M98 296 aaPredicted RBP10.47□□□□□ -0.73
CLN6-216ENST00000636876 PGPEP1Q9NXJ5 209 aa10.47□□□□□ -0.73
CLN6-216ENST00000636876 DYNC1H1Q14204 4646 aaKnown RBP10.47□□□□□ -0.73
CLN6-216ENST00000636876 DNAH5Q8TE73 4624 aa10.46□□□□□ -0.73
CLN6-216ENST00000636876 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.46□□□□□ -0.73
CLN6-216ENST00000636876 GVQW2A0A096LPI5 108 aaPredicted RBP10.46□□□□□ -0.73
CLN6-216ENST00000636876 hDV102S1A0JD36 115 aa10.46□□□□□ -0.73
CLN6-216ENST00000636876 HIGD2BQ4VC39 106 aa10.46□□□□□ -0.73
CLN6-216ENST00000636876 IGLV4-69A0A075B6H9 119 aa10.45□□□□□ -0.74
CLN6-216ENST00000636876 APOMO95445 188 aa10.45□□□□□ -0.74
CLN6-216ENST00000636876 IGLC3P0DOY3 106 aa10.45□□□□□ -0.74
CLN6-216ENST00000636876 FUSP35637 526 aaKnown RBP eCLIP10.45□□□□□ -0.74
CLN6-216ENST00000636876 CDPF1Q6NVV7 123 aa10.45□□□□□ -0.74
CLN6-216ENST00000636876 LINC01561Q8N1V8 128 aa10.45□□□□□ -0.74
CLN6-216ENST00000636876 LINC00469Q8N7U9 141 aa10.45□□□□□ -0.74
CLN6-216ENST00000636876 CDKN2A-AS1Q9UH64 79 aa10.45□□□□□ -0.74
CLN6-216ENST00000636876 CHTOPQ9Y3Y2 248 aaKnown RBP10.45□□□□□ -0.74
CLN6-216ENST00000636876 IGHV3-64A0A075B6Q5 118 aa10.44□□□□□ -0.74
CLN6-216ENST00000636876 IGLV5-45A0A087WSX0 123 aa10.44□□□□□ -0.74
CLN6-216ENST00000636876 CHAC1Q9BUX1 264 aa10.44□□□□□ -0.74
CLN6-216ENST00000636876 IGLV5-52A0A0A0MRZ9 124 aa10.43□□□□□ -0.74
CLN6-216ENST00000636876 S100A6P06703 90 aa10.43□□□□□ -0.74
CLN6-216ENST00000636876 OR10D4PQ8NGN7 298 aa10.43□□□□□ -0.74
CLN6-216ENST00000636876 ORAOV1Q8WV07 137 aa10.43□□□□□ -0.74
CLN6-216ENST00000636876 RYR1P21817 5038 aa10.43□□□□□ -0.74
CLN6-216ENST00000636876 C11orf86A6NJI1 115 aa10.42□□□□□ -0.74
CLN6-216ENST00000636876 H0Y8G0 127 aa10.42□□□□□ -0.74
CLN6-216ENST00000636876 ODF1Q14990 250 aa10.42□□□□□ -0.74
CLN6-216ENST00000636876 MAP1LC3CQ9BXW4 147 aa10.42□□□□□ -0.74
CLN6-216ENST00000636876 MRPL35Q9NZE8 188 aaKnown RBP10.42□□□□□ -0.74
CLN6-216ENST00000636876 F8VRH5 84 aa10.41□□□□□ -0.74
CLN6-216ENST00000636876 ZNF561-AS1K7EIQ3 104 aa10.41□□□□□ -0.74
CLN6-216ENST00000636876 ZNF22P17026 224 aaPredicted RBP10.41□□□□□ -0.74
CLN6-216ENST00000636876 CNBPP62633 177 aaKnown RBP10.41□□□□□ -0.74
CLN6-216ENST00000636876 SPAG11BQ08648 103 aa10.41□□□□□ -0.74
CLN6-216ENST00000636876 HIST3H2BBQ8N257 126 aa10.41□□□□□ -0.74
CLN6-216ENST00000636876 LINC00526Q96FQ7 95 aa10.41□□□□□ -0.74
CLN6-216ENST00000636876 C16orf90A8MZG2 172 aa10.4□□□□□ -0.74
CLN6-216ENST00000636876 SLPIP03973 132 aa10.4□□□□□ -0.74
CLN6-216ENST00000636876 SMIM1B2RUZ4 78 aa10.39□□□□□ -0.75
CLN6-216ENST00000636876 H3BRM9 83 aa10.39□□□□□ -0.75
CLN6-216ENST00000636876 LRP1BQ9NZR2 4599 aa10.39□□□□□ -0.75
CLN6-216ENST00000636876 SYS1-DBNDD2H3BUS1 97 aa10.38□□□□□ -0.75
CLN6-216ENST00000636876 C2orf48Q96LS8 159 aa10.38□□□□□ -0.75
CLN6-216ENST00000636876 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.37□□□□□ -0.75
CLN6-216ENST00000636876 SPINK8P0C7L1 97 aa10.37□□□□□ -0.75
CLN6-216ENST00000636876 C3orf79P0CE67 100 aa10.37□□□□□ -0.75
CLN6-216ENST00000636876 GCSHP23434 173 aa10.37□□□□□ -0.75
CLN6-216ENST00000636876 S100A2P29034 98 aa10.37□□□□□ -0.75
CLN6-216ENST00000636876 SNRPEP62304 92 aaKnown RBP10.37□□□□□ -0.75
CLN6-216ENST00000636876 KIAA0087Q14695 138 aa10.37□□□□□ -0.75
CLN6-216ENST00000636876 TMEM170BQ5T4T1 132 aa10.37□□□□□ -0.75
CLN6-216ENST00000636876 F8WDY8 70 aa10.36□□□□□ -0.75
CLN6-216ENST00000636876 PLNP26678 52 aa10.36□□□□□ -0.75
CLN6-216ENST00000636876 SYCNQ0VAF6 134 aa10.36□□□□□ -0.75
CLN6-216ENST00000636876 PET117Q6UWS5 81 aa10.36□□□□□ -0.75
CLN6-216ENST00000636876 C9orf163Q8N9P6 203 aa10.36□□□□□ -0.75
CLN6-216ENST00000636876 HIST1H2BLQ99880 126 aa10.36□□□□□ -0.75
CLN6-216ENST00000636876 PMCHL2Q9BQD1 86 aa10.36□□□□□ -0.75
CLN6-216ENST00000636876 C5orf52A6NGY3 159 aa10.35□□□□□ -0.75
CLN6-216ENST00000636876 DPM2O94777 84 aa10.35□□□□□ -0.75
CLN6-216ENST00000636876 PRSS2P07478 247 aa10.35□□□□□ -0.75
CLN6-216ENST00000636876 KRTDAPP60985 99 aa10.35□□□□□ -0.75
CLN6-216ENST00000636876 LINC01620Q4KN68 170 aa10.35□□□□□ -0.75
CLN6-216ENST00000636876 Q8IZM0 81 aa10.35□□□□□ -0.75
CLN6-216ENST00000636876 CARD19Q96LW7 228 aa10.35□□□□□ -0.75
CLN6-216ENST00000636876 CAMK2N2Q96S95 79 aa10.35□□□□□ -0.75
CLN6-216ENST00000636876 TOMM7Q9P0U1 55 aa10.35□□□□□ -0.75
CLN6-216ENST00000636876 IGLV5-39A0A0G2JS06 123 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms